BAC Information

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BAC

Clone NameB6Ng01-157J11
Chromosome1 (Build37)
Map Location 103,694,798 - 103,695,863
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157J11.bB6Ng01-157J11.g
ACCDH951782DH951783
length1,056779
definitionDH951782|Mus musculus domesticus DNA, BAC clone: B6Ng01-157J11, 5' end.DH951783|Mus musculus domesticus DNA, BAC clone: B6Ng01-157J11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtcctcatatttgcacaacaagcccttatcaagttattcatc
tcctcaatcctatcatcgcttttagctttttcattgttgaataaactcta
ctattttttaaaacaataaatatttttgctcaaaattataggaagtatca
agaaatatcagtgtatataaagcaaaacaaagaacatgtgagtgaggaaa
agaaatgtacacagggaatacatatttttatcatgagtatatatctagtt
tttgtgtgtctgtgtgtgtgtctgtgtattgtgtgtgcaggcaggagaca
gtttactagattcactcctttttcccttaaaaggctagaataagcttgag
ttatcaagcttggtggcaaacagtgataccattgaccaatcttgtcagcc
cttatttcatattttcaatatcattttatactgattatatatcttcttga
actgaaccaaaatatatgatattactgaggaaatctgtttttaatactta
tttttaacattttatgaaaggaaaggaaagagggttttgctgtcacattt
tatttacaccctagtgaatcacttattaatatttataagcagaaaataac
attctggcatttctgtacacataatgaaatcacctaggactaaaaatcaa
atttatgttttgaagtatttatatctttgtttctttccactgacctgctg
aatttataaaaaccaatagtaaaaatagtttgcaattttctgatctcaaa
ctaaaaaaattttggatttttcaataatcattttgattctacttacagaa
gggtttgtgtaagtcagacatggtatattttcctgttagtgaaaatttca
ttgtaatgtttcagtgttgaattatatcacaattatattaatggaatata
aaaattttcactcttactgtgacactgtagcatggtactaaatgtgacat
tttaaaacattcttcggctctaaattaattaaaaaatctcctgtaaatgc
cagctgtatactgactttaaaaagttaacttgaaaaaaatatcaacatgg
tgccat

gaattcctgatctctccaatagttttaacatgaggggtgttatgttttgt
caaatgcttttactgcatctaaggagatgattatgtgatattgtttcttt
gagcttgtttatatagtggattttgttactggattttcacatattgagcc
aaccctgtatcagtggcatgaagtctacttgatcttggcgactgatgctt
ttaatgtgttattggattcagtttgcaagaattttattgagtatttttgc
atcaatattcataagtgagattggtctgaagttcattttttttttggatg
ggtccttgtgtggttaaggtataagagtaattgtggctccacagaatgaa
tgaatgtttctattttatggaatagtttgaggaatattggtatcaggtct
tctttgaagatctggtagaattctatgctaaatcattctggctctgggct
tttttttttttttttctttttggtagggagatttttaatgacttttattt
ccttagggcctgtttagacaatttacctgctcttgattttaatgtaaaat
aaagaaagaaatcaaaggcttccttaatataatgaaaatattgacacatc
atacccaaacttgtgggacacactaaaaacagtggtaagaggaaaattca
taaaactaatgctcagataaagaaactggaaagatcttacactaacaagt
ttcagcacacttgagagctaccaaagaagaatagactacaggaaatagtc
aaaatcagggcttaatcactaaatagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103694798_103695863
seq2: B6Ng01-157J11.b_48_1103

seq1  GAATTCAAGTCCTCATATTTGCACAACAAGCCCTTATCAAGTTATTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCCTCATATTTGCACAACAAGCCCTTATCAAGTTATTCATC  50

seq1  TCCTCAATCCTATCATCGCTTTTAGCTTTTTCATTGTTGAATAAACTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAATCCTATCATCGCTTTTAGCTTTTTCATTGTTGAATAAACTCTA  100

seq1  CTATTTTTTAAAACAATAAATATTTTTGCTCAAAATTATAGGAAGTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTTAAAACAATAAATATTTTTGCTCAAAATTATAGGAAGTATCA  150

seq1  AGAAATATCAGTGTATATAAAGCAAAACAAAGAACATGTGAGTGAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATCAGTGTATATAAAGCAAAACAAAGAACATGTGAGTGAGGAAA  200

seq1  AGAAATGTACACAGGGAATACATATTTTTATCATGAGTATATATCTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTACACAGGGAATACATATTTTTATCATGAGTATATATCTAGTT  250

seq1  TTTGTGTGTCTGTGTGTGTGTCTGTGTATTGTGTGTGCAGGCAGGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTCTGTGTGTGTGTCTGTGTATTGTGTGTGCAGGCAGGAGACA  300

seq1  GTTTACTAGATTCACTCCTTTTTCCCTTAAAAGGCTAGAATAAGCTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTAGATTCACTCCTTTTTCCCTTAAAAGGCTAGAATAAGCTTGAG  350

seq1  TTATCAAGCTTGGTGGCAAACAGTGATACCATTGACCAATCTTGTCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGCTTGGTGGCAAACAGTGATACCATTGACCAATCTTGTCAGCC  400

seq1  CTTATTTCATATTTTCAATATCATTTTATACTGATTATATATCTTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCATATTTTCAATATCATTTTATACTGATTATATATCTTCTTGA  450

seq1  ACTGAACCAAAATATATGATATTACTGAGGAAATCTGTTTTTAATACTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACCAAAATATATGATATTACTGAGGAAATCTGTTTTTAATACTTA  500

seq1  TTTTTAACATTTTATGAAAGGAAAGGAAAGAGGGTTTTGCTGTCACATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACATTTTATGAAAGGAAAGGAAAGAGGGTTTTGCTGTCACATTT  550

seq1  TATTTACACCCTAGTGAATCACTTATTAATATTTATAAGCAGAAAATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACACCCTAGTGAATCACTTATTAATATTTATAAGCAGAAAATAAC  600

seq1  ATTCTGGCATTTCTGTACACATAATGAAATCACCTAGGACTAAAAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCATTTCTGTACACATAATGAAATCACCTAGGACTAAAAATCAA  650

seq1  ATTTATGTTTTGAAGTATTTATATCTTTGTTTCTTTCCACTGACCTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTTTTGAAGTATTTATATCTTTGTTTCTTTCCACTGACCTGCTG  700

seq1  AATTTATAAAAACCAATAGTAAAAATAGTTTGCAATTTTCTGATCTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAAAAACCAATAGTAAAAATAGTTTGCAATTTTCTGATCTCAAA  750

seq1  CTAAAAAAATTTTGGATTTTTCAATAATCATTTTGATTCTACTTACAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAATTTTGGATTTTTCAATAATCATTTTGATTCTACTTACAGAA  800

seq1  GGGTTTGTGTAAGTCAGACATGGTATATTTTCCTGTTAGTGAAAATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTGTAAGTCAGACATGGTATATTTTCCTGTTAGTGAAAATTTCA  850

seq1  TTGTAATGTTTCAGTGTTGAATTATATCACAATTATATTAATGGAATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGTTTCAGTGTTGAATTATATCACAATTATATTAATGGAATATA  900

seq1  AAAATTTTCACTCTTACTGTGACACTGTAGCAATGGTACTAAATGTGACA  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAATTTTCACTCTTACTGTGACACTGTAGC-ATGGTACTAAATGTGACA  949

seq1  TTTTAAAACATTCTTCGGCTTCTAAAATTAATTAAAAAAATCTCCTGTAA  1000
      ||||||||||||||||||| ||| ||||||||| ||||||||||||||||
seq2  TTTTAAAACATTCTTCGGC-TCT-AAATTAATT-AAAAAATCTCCTGTAA  996

seq1  ATGCCAGCTGTTATTACTGACTTTAAAAAAGTTTTAAC-TGAAAAAAAAA  1049
      |||||||||||   |||||||||||||||    ||||| ||||||||| |
seq2  ATGCCAGCTGT--ATACTGACTTTAAAAA---GTTAACTTGAAAAAAATA  1041

seq1  TTACAACATGGTGCCAT  1066
      |  ||||||||||||||
seq2  T--CAACATGGTGCCAT  1056


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