BAC Information

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BAC

Clone NameB6Ng01-158F23
Chromosome1 (Build37)
Map Location 34,259,518 - 34,460,131
singlet/doubletdoublet
Overlap geneDst, LOC100040913, LOC383629
Upstream geneLOC100040828, EG666108, Prim2, 1700001G17Rik, Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik
Downstream geneLOC100040938, Ccdc115, Imp4, Ptpn18, Tesp1, Cfc1, Tesp2, 9430069J07Rik, AA619741, Arhgef4, BC043098, Plekhb2, LOC666261
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158F23.bB6Ng01-158F23.g
ACCDH952335DH952336
length8581,089
definitionDH952335|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F23, 5' end.DH952336|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,259,518 - 34,260,371)(34,459,035 - 34,460,131)
sequence
gaattctgttctccacgcgcgcgcgggtgatagttctgctctgggcccag
gaaacctgtggagagtattctgtcccaccagagggttccagcgtgactaa
gtgctccggaatgtttgtcccactgttactgaacgggattgacattgcca
ttattggctacagtccactgcgcccgcctcctacctccaacaaagcccag
cccactcacttacagtcacacttgttaactttcctcgctttcccaccgga
gttaagctccgtgaaggcaggtgtttgtgcctgtcttgttcagcgctgta
ttcctagtatctaggagagtggttctcttagcctgtggatagcaaatccc
tttgagggttcgagcaacccctttcataggtgtcacctaaaactatctgc
gtgttagatatttatgttatgattcacaacagtagcaagttacagattag
cagtaaaagtaatttgtggttggggggaggggtcatcacgacgtgaggaa
ctgtattaaagggtcgcagcactaggaaggctgaggacactgatctagag
ggtcaccgggcccaaagtgcacaatgtgtatctgttcaagaaaggacgta
tagaagaatgctagcgtcctgttcagagtgtctctgagtcagtgttcggg
ttcctgccgtgttccttcaccgtgtacagagatgcaaacttcagtttagc
accttacccacagaaggtcttcctacctttccagaaatgcgtgattgaca
aactcttggtgagacaaactgtcaaattactctctattctactcttatta
gctaattaatttatttagtttacatcccaatttgcagcctcccccttccc
ctcccctc
gaattcatagggctatatgaatccagcgggtagattcttgtgtcccagag
caaagtgttgtgccagggacatgtgcttagaaatagaaaccgaggcagct
tataatgaaagaaaaagcatccttgggaatagggactggctgatgagcag
gggacagagaccaacaaaacaactgggcctcgtgggctcccctagaagaa
cgtcacggtcccacccttggactttgtttcttgggcttgtttttacacag
gttctgtcctttattcgtgttttttttaaaccttcctaatgctgcaaccc
tttaatacagtttcccatgttgtggtgacccccaaccataaaattatttc
cattgctatttcataactataaatttgctactgctgtgagttgcaatgta
aatatctgtgttttttgatggtcttaggcaaccccgggtaaagggtgttc
aactcacaatggagttgagacccacaggttgagtgagaaactctgcctta
aatggagtcccagtgatgaagggagacatctgttcttcctttgaaaagcg
gcttctttcatgtgttaatgttcttgctttcctgtcttgttccacggtca
cggtcacggtcacgggaggaggagacaagcaccaactctaaatcaacaac
tccatttctgcaatttaaagaataaagctcaactcatccactctctggag
acagaattttggcctcttcccttctcaaagtattcctgataccttggcag
gagctgcagatcactttatcctgacaggttttgtgtgtgcagtgctttct
tctttgcaaagtgatctggcacacgactctccaaacagccccctgctgta
gactttggctgctttggtttagtttctggagatagggtctgttatgtagc
acaggctggccttgcactggaagaggcatctgcttctggtatgtgggatg
acagacgtacaccaccattgacagaatgagctagctttctgctattggtg
tctgaataacaataaaactctcagatctggatgcttggtcacctagggag
gtctatcatacgaggtcgtccttgttggagtggccttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_34259518_34260371
seq2: B6Ng01-158F23.b_46_903

seq1  GAATTCTGTTCTCCACGCGCGCGCGGGTGATAGTTCTGCTCTGGGCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTCCACGCGCGCGCGGGTGATAGTTCTGCTCTGGGCCCAG  50

seq1  GAAACCTGTGGAGAGTATTCTGTCCCACCAGAGGGTTCCAGCGTGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTGTGGAGAGTATTCTGTCCCACCAGAGGGTTCCAGCGTGACTAA  100

seq1  GTGCTCCGGAATGTTTGTCCCACTGTTACTGAACGGGATTGACATTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCGGAATGTTTGTCCCACTGTTACTGAACGGGATTGACATTGCCA  150

seq1  TTATTGGCTACAGTCCACTGCGCCCGCCTCCTACCTCCAACAAAGCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGCTACAGTCCACTGCGCCCGCCTCCTACCTCCAACAAAGCCCAG  200

seq1  CCCACTCACTTACAGTCACACTTGTTAACTTTCCTCGCTTTCCCACCGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCACTTACAGTCACACTTGTTAACTTTCCTCGCTTTCCCACCGGA  250

seq1  GTTAAGCTCCGTGAAGGCAGGTGTTTGTGCCTGTCTTGTTCAGCGCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCTCCGTGAAGGCAGGTGTTTGTGCCTGTCTTGTTCAGCGCTGTA  300

seq1  TTCCTAGTATCTAGGAGAGTGGTTCTCTTAGCCTGTGGATAGCAAATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTATCTAGGAGAGTGGTTCTCTTAGCCTGTGGATAGCAAATCCC  350

seq1  TTTGAGGGTTCGAGCAACCCCTTTCATAGGTGTCACCTAAAACTATCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGTTCGAGCAACCCCTTTCATAGGTGTCACCTAAAACTATCTGC  400

seq1  GTGTTAGATATTTATGTTATGATTCACAACAGTAGCAAGTTACAGATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGATATTTATGTTATGATTCACAACAGTAGCAAGTTACAGATTAG  450

seq1  CAGTAAAAGTAATTTGTGGTTGGGGGGAGGGGTCATCACGACGTGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAGTAATTTGTGGTTGGGGGGAGGGGTCATCACGACGTGAGGAA  500

seq1  CTGTATTAAAGGGTCGCAGCACTAGGAAGGCTGAGGACACTGATCTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTAAAGGGTCGCAGCACTAGGAAGGCTGAGGACACTGATCTAGAG  550

seq1  GGTCACCGGGCCCAAAGTGCACAATGTGTATCTGTTCAAGAAAGGACGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCGGGCCCAAAGTGCACAATGTGTATCTGTTCAAGAAAGGACGTA  600

seq1  TAGAAGAATGCTAGCGTCCTGTTCAGAGTGTCTCTGAGTCAGTGTTCGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATGCTAGCGTCCTGTTCAGAGTGTCTCTGAGTCAGTGTTCGGG  650

seq1  TTCCTGCCGTGTTCCTTCACCGTGTACAGAGATGCAAACTTCAG-TTAGC  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCCTGCCGTGTTCCTTCACCGTGTACAGAGATGCAAACTTCAGTTTAGC  700

seq1  ACCTTA-CCACAGAAGGTCTTCCTACCTTTCCAGAAATGCGTGATTGACA  748
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACCCACAGAAGGTCTTCCTACCTTTCCAGAAATGCGTGATTGACA  750

seq1  AACTCTTGGTGAGACAAACTGTCAAATTACTCTCTATTCTACTCTTATTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGGTGAGACAAACTGTCAAATTACTCTCTATTCTACTCTTATTA  800

seq1  GCTAATTAATTTATTTAGTTTACATCCCAA-TTGCAGCCT-CCCCTTCCC  846
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  GCTAATTAATTTATTTAGTTTACATCCCAATTTGCAGCCTCCCCCTTCCC  850

seq1  CTCCCCTC  854
      ||||||||
seq2  CTCCCCTC  858

seq1: chr1_34459035_34460131
seq2: B6Ng01-158F23.g_68_1156 (reverse)

seq1  GCAAGGCCACTCCAACAAGGACGAACCTCCTAATGAT-GACACTCCCTA-  48
      ||||||||||||||||||||||| ||||| | ||||| ||| ||||||| 
seq2  GCAAGGCCACTCCAACAAGGACG-ACCTCGT-ATGATAGAC-CTCCCTAG  47

seq1  GTGACCAAGCATTCAGATCTGAGAG-TTTATTGTTATTCAGACCACCATA  97
      |||||||||||| |||||||||||| |||||||||||||||| |||||  
seq2  GTGACCAAGCATCCAGATCTGAGAGTTTTATTGTTATTCAGA-CACCAAT  96

seq1  GGCAGAAAGCCTAGCTCATTCTGTCAATGGTGGTGTACGTCTGTCATCCC  147
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAG-CTAGCTCATTCTGTCAATGGTGGTGTACGTCTGTCATCCC  145

seq1  ACATACCAGAGGCAGATGCCCTTCTTCCAGTGCAAGGCCAGCCTGTGCTA  197
      |||||||||| |||||||||  ||||||||||||||||||||||||||||
seq2  ACATACCAGAAGCAGATGCC--TCTTCCAGTGCAAGGCCAGCCTGTGCTA  193

seq1  CATAACAAGACCCTATCTCCAGAAACTAAAACCAAAGCAGCCAAAGTCTA  247
      |||||| |||||||||||||||||||| ||||||||||||||||||||| 
seq2  CATAAC-AGACCCTATCTCCAGAAACT-AAACCAAAGCAGCCAAAGTCT-  240

seq1  ACAGCAGGGGGCTGTTTGGAGAGTCGTGTGCCAGATCACTTTGCAAAGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGGGGCTGTTTGGAGAGTCGTGTGCCAGATCACTTTGCAAAGAA  290

seq1  GAAAGCACTGCACACACAAAACCTGTCAGGATAAAGTGATCTGCAGCTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACTGCACACACAAAACCTGTCAGGATAAAGTGATCTGCAGCTCC  340

seq1  TGCCAAGGTATCAGGAATACTTTGAGAAGGGAAGAGGCCAAAATTTCTGT  397
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCCAAGGTATCAGGAATACTTTGAGAAGGGAAGAGGCCAAAA-TTCTGT  389

seq1  CTCCAGAGAGTGGATGAGTTGAGCTTTATTCTTTAAATTGCAGAAATGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGAGTGGATGAGTTGAGCTTTATTCTTTAAATTGCAGAAATGGA  439

seq1  GTTGTTGATTTAGAGTTGGTGCTTGTCTCCTCCTCCCGTGACCGTGACCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGATTTAGAGTTGGTGCTTGTCTCCTCCTCCCGTGACCGTGACCG  489

seq1  TGACCGTGGAACAAGACAGGAAAGCAAGAACATTAACACATGAAAGAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGTGGAACAAGACAGGAAAGCAAGAACATTAACACATGAAAGAAGC  539

seq1  CGCTTTTCAAAGGAAGAACAGATGTCTCCCTTCATCACTGGGACTCCATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTCAAAGGAAGAACAGATGTCTCCCTTCATCACTGGGACTCCATT  589

seq1  TAAGGCAGAGTTTCTCACTCAACCTGTGGGTCTCAACTCCATTGTGAGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGAGTTTCTCACTCAACCTGTGGGTCTCAACTCCATTGTGAGTT  639

seq1  GAACACCCTTTACCCGGGGTTGCCTAAGACCATCAAAAAACACAGATATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCCTTTACCCGGGGTTGCCTAAGACCATCAAAAAACACAGATATT  689

seq1  TACATTGCAACTCACAGCAGTAGCAAATTTATAGTTATGAAATAGCAATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGCAACTCACAGCAGTAGCAAATTTATAGTTATGAAATAGCAATG  739

seq1  GAAATAATTTTATGGTTGGGGGTCACCACAACATGGGAAACTGTATTAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATTTTATGGTTGGGGGTCACCACAACATGGGAAACTGTATTAAA  789

seq1  GGGTTGCAGCATTAGGAAGGTTTAAAAAAAACACGAATAAAGGACAGAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAGCATTAGGAAGGTTTAAAAAAAACACGAATAAAGGACAGAAC  839

seq1  CTGTGTAAAAACAAGCCCAAGAAACAAAGTCCAAGGGTGGGACCGTGACG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAAAAACAAGCCCAAGAAACAAAGTCCAAGGGTGGGACCGTGACG  889

seq1  TTCTTCTAGGGGAGCCCACGAGGCCCAGTTGTTTTGTTGGTCTCTGTCCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTAGGGGAGCCCACGAGGCCCAGTTGTTTTGTTGGTCTCTGTCCC  939

seq1  CTGCTCATCAGCCAGTCCCTATTCCCAAGGATGCTTTTTCTTTCATTATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATCAGCCAGTCCCTATTCCCAAGGATGCTTTTTCTTTCATTATA  989

seq1  AGCTGCCTCGGTTTCTATTTCTAAGCACATGTCCCTGGCACAACACTTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCTCGGTTTCTATTTCTAAGCACATGTCCCTGGCACAACACTTTG  1039

seq1  CTCTGGGACACAAGAATCTACCCGCTGGATTCATATAGCCCTATGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGACACAAGAATCTACCCGCTGGATTCATATAGCCCTATGAATTC  1089