BAC Information

Click to search

BAC

Clone NameB6Ng01-158L04
Chromosome1 (Build37)
Map Location 3,179,371 - 3,179,921
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneXkr4, LOC100038975, LOC664792
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158L04.bB6Ng01-158L04.g
ACCDH952579DH952580
length1,241545
definitionDH952579|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L04, 5' end.DH952580|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaggtggaatttttagggtcacttatatatactatcatatcat
ctgcaaaaagttatattttgatttcctcttttccaatttgtatccccttg
atctccttttgttgtcgaattgctctggctaatacttcaagtactatgtt
gacaaggtagggagaaagtgggcaggcttgtctagtccctgattttagtg
ggattgcttccagattctctccatttactttgatgttggctactggtttg
ctctatattgcttttatcatgtttaggtatgggccttgaattcctgatct
ttccaagacttttatcatgaatgggtgttggatcttgtcaaatgcttttt
ctgcatctaacgagatgatcatgtggtttttgtctttgagtttgtttata
taatggattacattgatggattttcgtatattaaaccatccctgcatccc
tggaataaaacctacttggtcaggatggatgattgctttaatgtgttctt
ggattcagttagcgagaattttattgagtatttttgcattgatattcata
agagaaattggtctgaagttctttatctttgttggatctttctgtggttt
aggtatcagagtaactgtagcttcagaaaatgaatttggtagagtacctt
ctacttctattttttgaagtagttggtgcagaactggaattagatcttct
ttgaaggtctgatagaactctgcactaaacccatctggtcctgggctttt
tttggttgggagactattaataactgcttctatttctttaggggatatgg
gactgtttagatggttaatctgatcctgatttaactttggtacctggtat
ctgtccagaaatttgtccatttcgtctaggttttccagttttgttgagta
tagccttttgtagaagatctgatggtgtttggatttcttcaggatctgtt
tttatgtctcccttttcttttctgattgttaattaggattttttcccttt
gccctcctagtgagtctagctaaggtttatctaatcttgttgattttctc
aagaacaactccagtttgtaattatttgaaaagttctctgtctacatggt
tgattcaccctgaattgatattctgcttccacctcttggggatttctctt
ttcaagactttaatgtggtgacgcgtctagtgtgccctcagttctctgag
aatgagccgaattctctaaaagacgtttagtgtgtcatacg
tgtgtcccgatgactctgggtaggtgttccttgggccagaaatttgagct
taaatggaggacttatctgtgctctcaggtgtgtcagcattcctcggaga
ctagctctctccaggtgggatttgggtatggagagtttggcacatggtca
gctcaggggcatacataggaactggaagagtactttattattattattat
tattattattattattattattattattattaagttttacattatgggtg
ttttgtctccatgtgcactactgtggaggtcagaaaaaggtatcagcagt
cttggaactgatgattgtgagatggtatgtgaatattagaaaatgaaccc
tagttctctggaagaaaaaccagggctctcaatagcttagccatctcttc
agtcctcagagaaattttaatttgtatttttctaatgcagagtgttgtgg
ttttaatatgcatggccctcatagtctcatatatttgaatgcttggtcat
tatggagtggtgtaacttgatagggattaggaggtgtaggtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_3179371_3179921
seq2: B6Ng01-158L04.g_69_619

seq1  GAATTCTGTGTCCCGATGACTCTGGGTAGGTGTTCCTTGGGCCAGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCCCGATGACTCTGGGTAGGTGTTCCTTGGGCCAGAAATT  50

seq1  TGAGCTTAAATGGAGGACTTATCTGTGCTCTCAGGTGTGTCAGCATTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTAAATGGAGGACTTATCTGTGCTCTCAGGTGTGTCAGCATTCCT  100

seq1  CGGAGACTAGCTCTCTCCAGGTGGGATTTGGGTATGGAGAGTTTGGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGACTAGCTCTCTCCAGGTGGGATTTGGGTATGGAGAGTTTGGCACA  150

seq1  TGGTCAGCTCAGGGGCATACATAGGAACTGGAAGAGTACTTTATTATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGCTCAGGGGCATACATAGGAACTGGAAGAGTACTTTATTATTAT  200

seq1  TATTATTATTATTATTATTATTATTATTATTATTATTAAGTTTTACATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATTATTATTATTATTAAGTTTTACATTA  250

seq1  TGGGTGTTTTGTCTCCATGTGCACTACTGTGGAGGTCAGAAAAAGGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTTTGTCTCCATGTGCACTACTGTGGAGGTCAGAAAAAGGTATC  300

seq1  AGCAGTCTTGGAACTGATGATTGTGAGATGGTATGTGAATATTAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTTGGAACTGATGATTGTGAGATGGTATGTGAATATTAGAAAAT  350

seq1  GAACCCTAGTTCTCTGGAAGAAAAACCAGGGCTCTCAATAGCTTAGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTAGTTCTCTGGAAGAAAAACCAGGGCTCTCAATAGCTTAGCCAT  400

seq1  CTCTTCAGTCCTCAGAGAAATTTTAATTTGTATTTTTCTAATGCAGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGTCCTCAGAGAAATTTTAATTTGTATTTTTCTAATGCAGAGTG  450

seq1  TTGTGGTTTTAATATGCATGGCCCTCATAGTCTCATATATTTGAATGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTTTAATATGCATGGCCCTCATAGTCTCATATATTTGAATGCTT  500

seq1  GGTCATTATGGAGTGGTGTAACTTGATAGGGATTAGGAGGTGTAGGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTATGGAGTGGTGTAACTTGATAGGGATTAGGAGGTGTAGGTTTG  550

seq1  T  551
      |
seq2  T  551