BAC Information

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BAC

Clone NameB6Ng01-158O11
Chromosome1 (Build37)
Map Location 115,832,299 - 115,833,461
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O11.bB6Ng01-158O11.g
ACCDH952725DH952726
length1,1441,200
definitionDH952725|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O11, 5' end.DH952726|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccatagtttttgttccaacgtactgccttttgtttctgcctt
ggtatccttcaatgatggattaacctctacaatgaaataaaccatttcct
ctcataaattgcttttggtcagattgttttgatcatagcaacagaaaact
attagagtagtactttcaacaagagatgctgaagtgagtagggccttgct
tccactaaaggaatcaaagtggctgattataatcacaggcaaggcagtta
tgcctgttggaactgggtaccagcaggctagttattgtgaagaggtgagt
attgggcaggtatggatgagaagagctgacaggtcatgtttcatggtctg
tggttctgtagcatcagggcttgatcagaattttgaggctttgcagtcat
ttgcttttgctagggggacacatctccccattttcacttttgtatacttt
cagcccagtgctgtcccaggaggttggtttgtgtattcagaattcggcat
ctaagtcatagagaaaaggaaaatagttccttggacaggagtcctgatat
ctctcagcagggtgacatttggatgtttccttaataactctgagtccctg
tttccctgtaaagaaataaatatacctactacactgaaatattataaata
atttcttaactggtagctgaagaaaaaggtcaactggtaaaatacttgct
atgaaagcttgaggacgtaagttctttgttcaggactcatgtagaaacct
tggtatggtaaaatgcaattacaatctcagcatatgagaaacagagacag
gcagacacctggagctttgtgtcgagtagtctagactacatgttgagtaa
gtcaatgaaacaccctgtctcaaagtgggtggtacctgatgaatgacaag
taaggtttcctttggcctgcacatgcatatcacatatgtgtatgtgtatg
ataaacacacacacatacacacacacattcccaacccacaagagagagag
agagaaacgacgacgacgaaagacgagacagtgtattttttcttacctga
gtgaactcaaagtcttagaagcaggatgaacgatggtagcttgtcaaaat
taatttctgtctgggtatatgtgcatgctttcttgcccttgcaa
gaattctctgtttatctctgtactccattttttttaaaatagggatattt
agttctctgcagcctaacttcttgagttctttgtatattttaaatattag
ccctccattggatgtagagttggtaaaggtcttttcccaatctgcaggtg
gccactttgtcttattgacagtgtcctttgctttacagaatcttttcaat
tttatgaggctccatttgtcaattgttgatcttagagtataagacttcgt
tgttctgttcagaaaaatttcccctgtgcccatgtttgaggttttacccc
actatctcttctatttcagcatatctggttttatgtgaaggtcctcaatc
cacatggacttaagttttgtacaaggagagaagaatggatcaatttgcat
ttttacctgctaatcaccagtagaaccagcaccatttggtgaaattgctg
tctttttttccactggatcattttagctactttgtcaatgaccaagtgat
cataaatgtttgggttctttttgagtcttcaagtctattccattgatcta
cctgcctgtctctgtaccactaccaagcagtatttatcactattgctcta
gactatagcttgaggtcagagatggaaatttccccaaaagttcttttgtt
gttgtgaatactttttgctatcctgggttttgttgttgttgtagttgaca
ctgaaaatgttgttattccaaataaatttgaggattgttctttcttacta
tttaagaattaagttggaattttgatgggaattgtactgaatctgtagat
tgctatagtgagatgaccagttttactatatcagtcccaccaattcaata
gcatgggttattcttccatcttctagatcttcttcatttctttcttcagg
acttaaagttttgtctcacagatctttcacttgcttggctaaatcatacc
agatatttatatatttgtggctattatgagtgggttttttccctaattct
tgtcatcccataaaatccatgagtagaggaggcactgaatttgtttgagc
ttactttaatcagctacttgctggaggtttttaccatctgtgaagcctct
gcgaattttggactactatggtacatctatacttcaccggaacctggact
tctctcaatgtacctcacctgggcatgctgcgatcaaaaccgattgtagc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115832299_115833461
seq2: B6Ng01-158O11.b_47_1190

seq1  GAATTCTTCCATAGTTTTTGTTCCAACGTACTGCCTTTTGTTTCTGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCATAGTTTTTGTTCCAACGTACTGCCTTTTGTTTCTGCCTT  50

seq1  GGTATCCTTCAATGATGGATTAACCTCTACAATGAAATAAACCATTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCTTCAATGATGGATTAACCTCTACAATGAAATAAACCATTTCCT  100

seq1  CTCATAAATTGCTTTTGGTCAGATTGTTTTGATCATAGCAACAGAAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATTGCTTTTGGTCAGATTGTTTTGATCATAGCAACAGAAAACT  150

seq1  ATTAGAGTAGTACTTTCAACAAGAGATGCTGAAGTGAGTAGGGCCTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGTAGTACTTTCAACAAGAGATGCTGAAGTGAGTAGGGCCTTGCT  200

seq1  TCCACTAAAGGAATCAAAGTGGCTGATTATAATCACAGGCAAGGCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAAAGGAATCAAAGTGGCTGATTATAATCACAGGCAAGGCAGTTA  250

seq1  TGCCTGTTGGAACTGGGTACCAGCAGGCTAGTTATTGTGAAGAGGTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTGGAACTGGGTACCAGCAGGCTAGTTATTGTGAAGAGGTGAGT  300

seq1  ATTGGGCAGGTATGGATGAGAAGAGCTGACAGGTCATGTTTCATGGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCAGGTATGGATGAGAAGAGCTGACAGGTCATGTTTCATGGTCTG  350

seq1  TGGTTCTGTAGCATCAGGGCTTGATCAGAATTTTGAGGCTTTGCAGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGTAGCATCAGGGCTTGATCAGAATTTTGAGGCTTTGCAGTCAT  400

seq1  TTGCTTTTGCTAGGGGGACACATCTCCCCATTTTCACTTTTGTATACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTGCTAGGGGGACACATCTCCCCATTTTCACTTTTGTATACTTT  450

seq1  CAGCCCAGTGCTGTCCCAGGAGGTTGGTTTGTGTATTCAGAATTCGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGTGCTGTCCCAGGAGGTTGGTTTGTGTATTCAGAATTCGGCAT  500

seq1  CTAAGTCATAGAGAAAAGGAAAATAGTTCCTTGGACAGGAGTCCTGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCATAGAGAAAAGGAAAATAGTTCCTTGGACAGGAGTCCTGATAT  550

seq1  CTCTCAGCAGGGTGACATTTGGATGTTTCCTTAATAACTCTGAGTCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCAGGGTGACATTTGGATGTTTCCTTAATAACTCTGAGTCCCTG  600

seq1  TTTCCCTGTAAAGAAATAAATATACCTACTACACTGAAATATTATAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGTAAAGAAATAAATATACCTACTACACTGAAATATTATAAATA  650

seq1  ATTTCTTAACTGGTAGCTGAAGAAAAAGGTCAACTGGTAAAATACTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAACTGGTAGCTGAAGAAAAAGGTCAACTGGTAAAATACTTGCT  700

seq1  ATGAAAGCTTGAGGACGTAAGTTCTTTGTTCAGGACTCATGTAGAAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCTTGAGGACGTAAGTTCTTTGTTCAGGACTCATGTAGAAACCT  750

seq1  TGGTATGGTAAAATGCAATTACAATCTCAGCATATGAGAAACAGAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGTAAAATGCAATTACAATCTCAGCATATGAGAAACAGAGACAG  800

seq1  GCAGACACCTGGAGCTTTGTGTCGAGTAGTCTAGACTACATGTTGAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACCTGGAGCTTTGTGTCGAGTAGTCTAGACTACATGTTGAGTAA  850

seq1  GTCAATGAAACACCCTGTCTCAAAGTGGGTGGTACCTGATGAATGACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGAAACACCCTGTCTCAAAGTGGGTGGTACCTGATGAATGACAAG  900

seq1  TAAGGTTTCCTTTGGCCTGCACATGCATATCACATATGTGTATGTGTATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTCCTTTGGCCTGCACATGCATATCACATATGTGTATGTGTATG  950

seq1  AATAAACACACACACATACACACACACATTCACAAACACACAAAGAGAGA  1000
       |||||||||||||||||||||||||||||| | ||| ||| ||||||||
seq2  -ATAAACACACACACATACACACACACATTC-CCAACCCAC-AAGAGAGA  997

seq1  GAGAGAGAAACAGACAGACAGACAGACAGACAGAGACAGTGATATTTTTC  1050
      ||||||||||| ||| ||| ||| || |||| ||||||||| ||||||| 
seq2  GAGAGAGAAAC-GAC-GAC-GAC-GAAAGAC-GAGACAGTG-TATTTTTT  1041

seq1  TTAACCTGAGTGAACTCAACAGTTCTTAGAAGCAGGATGACCATATAGTA  1100
       | |||||||||||||||| || ||||||||||||||||| |  || || 
seq2  CTTACCTGAGTGAACTCAA-AG-TCTTAGAAGCAGGATGAAC-GATGGT-  1087

seq1  AGCTTGTCAAATATTAATTTCTTGTCCCTGGGTTATATGTGCATGCTTCT  1150
      ||||||||||| ||||||||| |||  ||||| |||||||||||||||  
seq2  AGCTTGTCAAA-ATTAATTTC-TGT--CTGGG-TATATGTGCATGCTTTC  1132

seq1  TGGCCCTTTGCAA  1163
      | |||| ||||||
seq2  TTGCCC-TTGCAA  1144