BAC Information

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BAC

Clone NameB6Ng01-158O23
Chromosome1 (Build37)
Map Location 51,577,838 - 51,725,397
singlet/doubletdoublet
Overlap genenone
Upstream geneTmeff2, Sdpr, LOC383504, Obfc2a
Downstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O23.bB6Ng01-158O23.g
ACCDH952747DH952748
length8621,060
definitionDH952747|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O23, 5' end.DH952748|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,724,536 - 51,725,397)(51,577,838 - 51,578,893)
sequence
gaattcttagcaataattacacataccacaatactccatgcttattgatc
atgtccctcttgccaagtaatgagccaaacacctctcctacattgccgtt
ctaactcttgacagcagaattattagtcttagttctactgagatatcgag
gtttaaagagcttaggtaactgacttaaggtcacataacaagttgctgaa
gcttaaaaccgacaaataacagaacacatatttttttttaattaggtatt
tagctcatttacatttccaatgctataccaaaagtcccccttacccaccc
acccccactcccctacccacccactccccccctttggccctggcgttccc
ctgtaccggggcacacaaagtctgcgtgtccaatgggcctctctttccag
tgatggccgactaggccatcttttgatacaacagaacacatattaacttg
atttaaagttttggcctctggtagatcttctgtaagagctttaattgaga
gtgtagtgtagcaatttctttcaaacatttcttgctggggcagagagacc
cctaaagacccaagaagtaaaggaaattgacaaggtgccaggaagctttt
gaaatttacaaaattaaggtccctcccccaaggctaagatagaggaactc
agctagggacaggggaagtttagctcagcagttttgcagggatctgcgga
gaagcagcttttgagacttgtcactagtgggtgaggtgggctttttggtg
cttcccctgccattgagtcagtaatttatcacccacatttctacaagaat
cccaaaaagcccactgattgattcactcagccatacatttgtggaattgt
tttcttgatctg
gaattctggggacttttcagagggtatataaatgctaggaccccgagagg
tgggggtttgttggttgttgacagtgaaaattcaacttgccccaaggcac
tggacacctctaatcagcaggaagcagtctcacaactctgtcatcccctt
tcctttctagtcttcttttttaaaaacaaaaacaaaaacaaactcctatt
tagtgttaggggattggattgaaagggtagaaaagggactggtgagatgg
ctcagtgggtaagagcgccgactgctcttctgaaggtcctgagttcaaat
cccagcaaccacatggtggctcacaaccaaccataatgagagatctgaca
ccgaagacagctacagtgtacccatttataataataaatctttgggctag
agcgaccagatcaaacagaggttaaattcccaacaattataataataaat
aaatctttttttttttaaaaaaaaggacaaaaaaagaaaaaaagaaaaga
aaaaggaaagggtagaaaaggggaggagaaggtggaagaaagaagaacgg
gcaaagaagcaacctgccagagcataaggacttagtataacaatttttat
taaaaagtatccaaaatacttaaatgtcatttcccccaaagacacagctc
ttctcattgtggtaaactcacccaaagtccccaactttcagccattttta
tggtttcctagtatgaaaacaaaagcctaagacccaaccagtccaggtct
tccacttctgagtcacagacatcctgttttctccgtttgacccgatggga
tcaggcatggactcagcgttgacagtggagttacacggctttatttactc
actcgaattcgacttggtaagcagctgctgtgttccaggcactgccaaca
aattggaactagagggatgaatataaatcatcaggaaaatgccaatcaaa
accacggcagataagcatctcatgccttgttagctagccttttatggttt
aagaaagaatgacgtttgacaaggatatggatattattgggattcctgta
tgttctaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_51724536_51725397
seq2: B6Ng01-158O23.b_47_908 (reverse)

seq1  CAGATCAAGAAAACAATTCCACAAATGTCTGGCTTGGTGAATCAATCAGT  50
      |||||||||||||||||||||||||||| |||||  ||||||||||||||
seq2  CAGATCAAGAAAACAATTCCACAAATGTATGGCTGAGTGAATCAATCAGT  50

seq1  GGGCTTTTTGGGATTCTTGTAGGAATGTGGGTGATAAATTACTGACTCAA  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGGCTTTTTGGGATTCTTGTAGAAATGTGGGTGATAAATTACTGACTCAA  100

seq1  AGGCAGGGGAAGCACCAAAAAGCCCACCTCACCCACTAGTGACAAGTCTC  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGGGAAGCACCAAAAAGCCCACCTCACCCACTAGTGACAAGTCTC  150

seq1  AAAAGCTGCTTCTCCGCAGATCCCTGCAAAACTGCTGAGCTAAACTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGCTTCTCCGCAGATCCCTGCAAAACTGCTGAGCTAAACTTCCC  200

seq1  CTGTCCCTAGCTGAGTTCCTCTATCTTAGCCTTGGGGGAGGGACCTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCTAGCTGAGTTCCTCTATCTTAGCCTTGGGGGAGGGACCTTAAT  250

seq1  TTTGTAAATTTCAAAAGCTTCCTGGCACCTTGTCAATTTCCTTTACTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATTTCAAAAGCTTCCTGGCACCTTGTCAATTTCCTTTACTTCT  300

seq1  TGGGTCTTTAGGGGTCTCTCTGCCCCAGCAAGAAATGTTTGAAAGAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTTAGGGGTCTCTCTGCCCCAGCAAGAAATGTTTGAAAGAAATT  350

seq1  GCTACACTACACTCTCAATTAAAGCTCTTACAGAAGATCTACCAGAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACTACACTCTCAATTAAAGCTCTTACAGAAGATCTACCAGAGGCC  400

seq1  AAAACTTTAAATCAAGTTAATATGTGTTCTGTTGTATCAAAAGATGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTAAATCAAGTTAATATGTGTTCTGTTGTATCAAAAGATGGCCT  450

seq1  AGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAGACTTTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAGACTTTGTGT  500

seq1  GCCCCGGTACAGGGGAACGCCAGGGCCAAAGGGGGGGAGTGGGTGGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGGTACAGGGGAACGCCAGGGCCAAAGGGGGGGAGTGGGTGGGTAG  550

seq1  GGGAGTGGGGGTGGGTGGGTAAGGGGGACTTTTGGTATAGCATTGGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGGGGTGGGTGGGTAAGGGGGACTTTTGGTATAGCATTGGAAAT  600

seq1  GTAAATGAGCTAAATACCTAATTAAAAAAAAATATGTGTTCTGTTATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAGCTAAATACCTAATTAAAAAAAAATATGTGTTCTGTTATTTG  650

seq1  TCGGTTTTAAGCTTCAGCAACTTGTTATGTGACCTTAAGTCAGTTACCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTTTAAGCTTCAGCAACTTGTTATGTGACCTTAAGTCAGTTACCTA  700

seq1  AGCTCTTTAAACCTCGATATCTCAGTAGAACTAAGACTAATAATTCTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTAAACCTCGATATCTCAGTAGAACTAAGACTAATAATTCTGCT  750

seq1  GTCAAGAGTTAGAACGGCAATGTAGGAGAGGTGTTTGGCTCATTACTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAGTTAGAACGGCAATGTAGGAGAGGTGTTTGGCTCATTACTTGG  800

seq1  CAAGAGGGACATGATCAATAAGCATGGAGTATTGTGGTATGTGTAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGGACATGATCAATAAGCATGGAGTATTGTGGTATGTGTAATTAT  850

seq1  TGCTAAGAATTC  862
      ||||||||||||
seq2  TGCTAAGAATTC  862

seq1: chr1_51577838_51578893
seq2: B6Ng01-158O23.g_68_1127

seq1  GAATTCTGGGGACTTTTCAGAGGGTATATAAATGCTAGGACCCCGAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGACTTTTCAGAGGGTATATAAATGCTAGGACCCCGAGAGG  50

seq1  TGGGGGTTTGTTGGTTGTTGACAGTGAAAATTCAACTTGCCCCAAGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTTTGTTGGTTGTTGACAGTGAAAATTCAACTTGCCCCAAGGCAC  100

seq1  TGGACACCTCTAATCAGCAGGAAGCAGTCTCACAACTCTGTCATCCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCTCTAATCAGCAGGAAGCAGTCTCACAACTCTGTCATCCCCTT  150

seq1  TCCTTTCTAGTCTTCTTTTTTAAAAACAAAAACAAAAACAAACTCCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTAGTCTTCTTTTTTAAAAACAAAAACAAAAACAAACTCCTATT  200

seq1  TAGTGTTAGGGGATTGGATTGAAAGGGTAGAAAAGGGACTGGTGAGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTAGGGGATTGGATTGAAAGGGTAGAAAAGGGACTGGTGAGATGG  250

seq1  CTCAGTGGGTAAGAGCGCCGACTGCTCTTCTGAAGGTCCTGAGTTCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGGTAAGAGCGCCGACTGCTCTTCTGAAGGTCCTGAGTTCAAAT  300

seq1  CCCAGCAACCACATGGTGGCTCACAACCAACCATAATGAGAGATCTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACATGGTGGCTCACAACCAACCATAATGAGAGATCTGACA  350

seq1  CCGAAGACAGCTACAGTGTACCCATTTATAATAATAAATCTTTGGGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGACAGCTACAGTGTACCCATTTATAATAATAAATCTTTGGGCTAG  400

seq1  AGCGACCAGATCAAACAGAGGTTAAATTCCCAACAATTATAATAATAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGACCAGATCAAACAGAGGTTAAATTCCCAACAATTATAATAATAAAT  450

seq1  AAATCTTTTTTTTTTTAAAAAAAAGGACAAAAAAAGAAAAAAAGAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTTTTTTTTAAAAAAAAGGACAAAAAAAGAAAAAAAGAAAAGA  500

seq1  AAAAGGAAAGGGTAGAAAAGGGGAGGAGAAGGTGGAAGAAAGAAGAACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAGGGTAGAAAAGGGGAGGAGAAGGTGGAAGAAAGAAGAACGG  550

seq1  GCAAAGAAGCAACCTGCCAGAGCATAAGGACTTAGTATAACAATTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAGCAACCTGCCAGAGCATAAGGACTTAGTATAACAATTTTTAT  600

seq1  TAAAAAGTATCCAAAATACTTAAATGTCATTTCCCCCAAAGACACAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTATCCAAAATACTTAAATGTCATTTCCCCCAAAGACACAGCTC  650

seq1  TTCTCATTGTGGTAAACTCACCCAAAGTCCCCAACTTTCAGCCATTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTGTGGTAAACTCACCCAAAGTCCCCAACTTTCAGCCATTTTTA  700

seq1  TGGTTTCCTAGTATGAAAACAAAAGCCTAAGACCCAACCAGTCCAGGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCTAGTATGAAAACAAAAGCCTAAGACCCAACCAGTCCAGGTCT  750

seq1  TCCACTTCTGAGTCACAGACATCCTGTTTTCTCCGTTTGACCCGATGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTGAGTCACAGACATCCTGTTTTCTCCGTTTGACCCGATGGGA  800

seq1  TCAGGCATGGACTCAGCG-TGACAGTGGAGTTACACGGCTTAATTTACTC  849
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  TCAGGCATGGACTCAGCGTTGACAGTGGAGTTACACGGCTTTATTTACTC  850

seq1  ACTCGAATTCGACTTGGTAAGCAGCTGCTGTGTTCCAGGCACTGCCAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAATTCGACTTGGTAAGCAGCTGCTGTGTTCCAGGCACTGCCAACA  900

seq1  AATT-GAACTAGAGGGATGAATATAAATCATCAGGAAAATGCCAATCAAA  948
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAACTAGAGGGATGAATATAAATCATCAGGAAAATGCCAATCAAA  950

seq1  ACCACGGCAGGATAGCATCTCATGCCTGTTAAGCTAGCCTTCTAT-GTTT  997
      ||||||||||   ||||||||||||||  | |||||||||| ||| ||||
seq2  ACCACGGCAGATAAGCATCTCATGCCTTGTTAGCTAGCCTTTTATGGTTT  1000

seq1  TAGAAAG-ATGAGCGTTGGCAAGGATATGGATA-TATT-GGATCCCTTGT  1044
       |||||| ||||   ||| |||||||||||||| |||| |||| || |||
seq2  AAGAAAGAATGACGTTTGACAAGGATATGGATATTATTGGGATTCC-TGT  1049

seq1  ATAGTTCTAATG  1056
      || |||||||||
seq2  AT-GTTCTAATG  1060