MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-159E09
Chromosome	1 (Build37)
Map Location	100,342,991 - 100,344,026
singlet/doublet	singlet
Overlap gene	Slco6d1
Upstream gene	EG634346, D1Ertd622e, Hisppd1, Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887
Downstream gene	LOC100041868, EG666182
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG634346 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634346 MGI:3647710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	D1Ertd622e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52392 MGI:1277184
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hisppd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227399 MGI:2142810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zh2c2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252876 MGI:2182036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18484 MGI:97475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041823 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 571 ESTs, 7 Proteins

name	LOC666153 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100040887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 3 Proteins

name	Slco6d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70866 MGI:1918116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins

name	LOC100041868 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 63 Proteins

name	EG666182 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666182 MGI:3644984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG634346 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234215 GeneID:634346 MGI:3647710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG634346 transcript_id : XM_981747.2

name	D1Ertd622e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981586 GeneID:52392 MGI:1277184
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 1, ERATO Doi 622, expressed transcript_id : NM_133825.2

name	Hisppd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328376 GeneID:227399 MGI:2142810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histidine acid phosphatase domain containing 1 transcript_id : NM_173760.3

name	Zh2c2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922603 GeneID:252876 MGI:2182036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, H2C2 domain containing transcript_id : NM_026250.2

name	Pam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367449 GeneID:18484 MGI:97475
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylglycine alpha-amidating monooxygenase transcript_id : NM_013626.2

name	LOC100041823 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234233 GeneID:100041823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 571 ESTs, 7 Proteins product : similar to general transcription factor transcript_id : XM_001477813.1

name	LOC100040887 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234217 GeneID:100040887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 3 Proteins product : similar to CD2 antigen (cytoplasmic tail) binding protein 2 transcript_id : XM_001475440.1

name	Slco6d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363832 GeneID:70866 MGI:1918116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins product : solute carrier organic anion transporter family, member 6d1, transcript variant 1 transcript_id : XM_129964.3

name	LOC100041868 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234235 GeneID:100041868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 63 Proteins product : similar to serine/threonine kinase 38-like transcript_id : XM_001477834.1

name	EG666182 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363835 GeneID:666182 MGI:3644984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG666182 transcript_id : XM_991070.1

name	EG634346 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234216 GeneID:634346 MGI:3647710
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986841.2

name	D1Ertd622e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527042 CCDS:CCDS15202.1 GeneID:52392 MGI:1277184
definition	codon_start : 1 product : hypothetical protein LOC52392 protein_id : NP_598586.1

name	Hisppd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328377 GeneID:227399 MGI:2142810
definition	GO_function : GO:0003993 - acid phosphatase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : histidine acid phosphatase domain containing 1 protein_id : NP_776121.2

name	Zh2c2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922604 GeneID:252876 MGI:2182036
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0015074 - DNA integration [Evidence IEA] codon_start : 1 product : zinc finger, H2C2 domain containing protein_id : NP_080526.2

name	Pam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305367 GeneID:18484 MGI:97475
definition	GO_component : GO:0005829 - cytosol [Evidence TAS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004598 - peptidylamidoglycolate lyase activity [Evidence IEA]; GO:0004504 - peptidylglycine monooxygenase activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006518 - peptide metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation function : alpha-amidating enzyme product : peptidylglycine alpha-amidating monooxygenase protein_id : NP_038654.1

name	LOC100041823 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234234 GeneID:100041823
definition	codon_start : 1 product : similar to general transcription factor protein_id : XP_001477863.1

name	LOC100040887 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234218 GeneID:100040887
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475490.1

name	Slco6d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20857651 GeneID:70866 MGI:1918116
definition	codon_start : 1 product : solute carrier organic anion transporter family, member 6d1 isoform 1 protein_id : XP_129964.1

name	LOC100041868 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234236 GeneID:100041868
definition	codon_start : 1 product : similar to serine/threonine kinase 38-like protein_id : XP_001477884.1

name	EG666182 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363836 GeneID:666182 MGI:3644984
definition	codon_start : 1 product : similar to putative retrovirus-related gag protein protein_id : XP_996164.1

name	LOC666153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666153
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:123571
definition	standard_name : 22.MMHAP69FRH7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:167284
definition	standard_name : D1Ertd622e

name	(CDS detail)
type	STS
link
xref	UniSTS:123953
definition	standard_name : RH118244

name	(CDS detail)
type	STS
link
xref	UniSTS:164123
definition	standard_name : AW047450

name	(CDS detail)
type	STS
link
xref	UniSTS:165094
definition	standard_name : AI987691

name	(CDS detail)
type	STS
link
xref	UniSTS:110284
definition	standard_name : AU047666

name	(CDS detail)
type	STS
link
xref	UniSTS:179854
definition	standard_name : AW555814

name	(CDS detail)
type	STS
link
xref	UniSTS:232662
definition	standard_name : RH143415

name	(CDS detail)
type	STS
link
xref	UniSTS:207194
definition	standard_name : BE688627

name	(CDS detail)
type	STS
link
xref	UniSTS:178444
definition	standard_name : U79523

name	(CDS detail)
type	STS
link
xref	UniSTS:225022
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:185448
definition	standard_name : BB187771

name	(CDS detail)
type	STS
link
xref	UniSTS:234182
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:122683
definition	standard_name : 01.MMHAP9FLA1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:209706
definition	standard_name : RH126583

name	(CDS detail)
type	STS
link
xref	UniSTS:128445
definition	standard_name : D1Mit11

name	(CDS detail)
type	STS
link
xref	UniSTS:125167
definition	standard_name : MHAa38d11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:224807
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162212
definition	standard_name : RH125390

name	(CDS detail)
type	STS
link
xref	UniSTS:224725
definition

clone name	MSMg01-449H22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-114H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447P24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-272B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-143F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-063K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-067K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-389B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-159E09.b	B6Ng01-159E09.g
ACC	DH952984	DH952985
length	1,041	1,038
definition	DH952984\|Mus musculus domesticus DNA, BAC clone: B6Ng01-159E09, 5' end.	DH952985\|Mus musculus domesticus DNA, BAC clone: B6Ng01-159E09, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctatttaaattaggaaacaatttagccatagataccatactttca gcagttaagagacatacatagtggttaattgcaaattttaaacattttaa ttatcaaagaattgtgtcttataaagcattgctgttgttgaagaatttgc actctaaaatacacattggttttagtgtgtttaacataacacctgttatt ctatgttaaatgtgattattataatgtgtacaagttcatgatgtatattt tcatactgatgtgtagttaagaaaatattattttcctcgtgacctatagg tgcacgccagataagacttgagaaaagtcaggaacctcctacctttgaca ggagacttaaaaataaggaaattaagaataatttgaagagtgttcttcat gctacttgggtaaagtaaaatatttctgttaacaagccagttaaagtgac ctgtgtagttttcttatagagtcaagaatatggtaaggtgtttaatttaa atttgcgtgaaaggtttggagtctcttagataaattactaaattgtacat tttccttataatggaaagaaataactcccttttttgatattacaaaagac aggtatagggttagagaataatgattcagaaataatattttgatttattt ttaattgatttggtacaatttttgtgtttattctctctgaaagaattaat gggagatttaataaaatttcatgaattggaagaactctgtgtcagcacat agcccccacaacacaaataatatcacaatatttaaaacaaaatcctttgt ttctctgtattataaacaggcctgtcatagtagtaacagacatggggaat gcatagatagccacttttaatgcacttaatcctacttctgaatatatttt tttattttataacatttcttctgtgcatatagattgcacggtgccaattt tcacacattttttttttaccatggtaattacactccaagatcttggaaat aacatcaattgaatttctcctactcaccattagatttgcat	gaattctcacttgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatgtactcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa caaaacacccatgggaagaagttacagagacaaagtttggagctgagatg aaaggatggaccatgtagagactgccatatccagggatccaccccataat cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa aggacccagatgtagctgtcttctgtgagactattgccggggcctagcaa acaagaagtgatgctccaagccgctattgttggattctaggccccctaat ggaggagcctgagaaatacccaggactttaggtacttcaaccctaatgtg gaaaaacttggactatccataccccggagtcctgttct
quality values	Open. Hide. 47 47 25 24 47 27 38 38 61 50 32 50 61 50 47 47 47 47 61 61 55 61 50 50 61 16 12 9 9 9 7 5 5 8 15 13 17 33 36 52 61 49 61 61 61 61 36 30 32 20 23 30 32 61 61 61 61 61 59 61 59 61 61 59 59 59 59 28 20 12 12 18 26 14 21 20 29 59 35 44 55 52 59 55 55 61 61 61 61 59 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 59 59 59 59 59 61 61 61 61 61 61 59 61 59 61 61 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 59 52 52 59 59 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 59 59 52 59 59 61 61 59 61 61 61 61 61 59 59 61 61 61 59 59 52 59 59 52 61 61 61 61 61 59 59 59 59 59 59 59 59 59 61 61 61 61 59 59 61 59 49 59 41 59 52 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 43 43 32 59 49 49 59 59 61 59 61 61 61 61 52 61 59 43 61 59 61 61 61 61 61 49 59 61 59 59 52 59 59 59 61 61 39 38 41 35 45 43 59 61 59 61 61 61 61 59 52 59 52 49 59 43 41 43 61 61 59 59 59 59 61 59 59 61 61 61 61 61 61 59 59 59 59 55 59 61 61 61 61 61 61 61 55 52 55 55 55 55 61 61 61 15 36 31 10 26 19 52 52 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 43 37 50 26 35 61 61 61 61 55 61 61 55 55 61 61 61 50 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 61 61 55 48 50 50 50 50 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 24 25 22 22 29 33 43 43 53 53 61 61 61 61 53 50 53 47 61 53 61 45 53 61 53 50 61 33 50 50 61 43 43 61 61 53 50 61 27 47 47 50 61 52 61 53 35 53 61 61 61 61 39 39 50 23 4 19 42 43 30 46 50 61 52 61 61 61 61 61 37 31 61 39 50 45 61 31 27 33 33 33 31 61 53 40 38 61 61 53 50 39 43 52 39 39 35 61 53 61 61 52 35 53 43 57 53 34 28 34 34 53 39 47 53 53 57 52 57 57 45 57 42 53 43 40 34 39 57 57 57 53 42 39 18 57 42 45 45 45 25 32 34 12 12 9 9 17 8 14 53 53 53 53 47 39 37 53 42 26 46 34 43 52 42 53 45 34 47 19 25 43 28 37 37 32 39 47 52 12 33 45 34 43 43 29 41 38 28 38 23 45 38 57 53 50 23 53 32 45 45 24 42 18 18 38 36 29 17 36 45 29 53 50 35 29 37 47 46 53 28 20 21 22 17 28 21 34 46 32 34 32 30 31 53 24 25 30 20 52 42 33 35 38 33 28 19 18 8 17 39 40 32 23 15 19 28 6 17 52 32 30 52 37 34 25 27 50 21 36 37 24 53 46 9 20 37 27 18 16 14 40 31 16 11 16 27 24 30 23 21 25 18 24 28 32 26 17 18 27 19 12 14 12 6 33 24 41 26 14 27 21 21 9 8 17 33 44 40 47 21 28 15 12 18 32 57 15 10 5 4 7 6 45 36 17 25 23 48 13 20 5 16 19 9 13 17 8 37 10 8 8 20 22 24 13 16 17 36 23 28 17 27 44 20 18 23 30 46 13 27 24 21 21 11 33 48 48 29 9 9 21 7 7 6 29 46 48 48 46 51 46 27 29 23 10 8 7 7 8 7 8 13 36 24 14 5 23 6 10 9 12 7 21 14 14 7 19 14 26 21 23 20 13 46 51 14 13 32 20 15 13 15 8 6 30 33 28 31 28 21 27 15 7 8 19 31 30 20 26 16 22 16 8 9 5 8 28 21 29 8 46 12 43 20 17 20 28 28	Open. Hide. 50 29 33 38 61 12 15 13 7 8 6 11 6 7 7 19 15 11 19 23 27 55 55 61 50 47 61 55 37 49 49 61 55 61 61 52 55 52 55 61 61 61 47 61 61 61 61 55 21 32 15 12 18 10 13 13 13 27 49 50 43 59 52 59 61 61 59 59 61 61 59 55 59 59 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 41 59 61 59 61 61 59 61 61 61 61 59 59 59 59 59 59 52 59 59 59 52 61 59 61 61 61 59 61 59 61 52 61 61 59 52 59 55 59 59 59 59 59 59 49 61 59 61 59 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 59 59 59 61 61 61 61 59 59 61 59 52 59 59 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 59 59 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 52 55 61 55 55 55 61 61 61 61 61 61 61 61 61 61 55 61 55 52 55 52 41 52 55 55 55 61 61 55 61 55 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 61 55 55 55 55 55 41 49 55 61 61 61 61 61 61 61 55 55 61 61 52 61 52 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 47 61 61 61 61 61 61 61 61 61 61 61 61 47 35 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 39 61 61 45 52 47 61 52 61 61 61 61 61 61 53 53 61 53 47 61 42 39 43 50 26 42 35 32 50 47 45 61 35 39 38 23 33 50 36 47 61 53 40 52 50 52 39 46 50 50 61 61 52 34 61 61 61 42 61 61 61 61 53 46 61 53 40 61 61 52 50 31 45 47 39 39 45 35 31 29 21 24 28 25 32 39 20 10 27 39 24 27 30 45 24 20 13 8 22 12 31 39 36 47 16 40 11 24 9 10 19 10 16 21 27 22 38 30 35 28 23 30 45 19 40 30 38 45 38 42 39 30 21 47 33 45 40 24 52 33 21 43 30 50 27 53 36 38 47 23 45 28 37 45 20 34 24 42 28 16 33 27 19 50 33 34 53 53 39 28 36 19 19 53 40 18 37 8 43 26 20 57 27 38 30 38 19 45 45 37 25 21 42 52 52 10 24 16 37 19 22 31 20 23 23 12 16 23 25 42 15 21 57 17 41 33 13 30 35 24 25 53 22 25 24 34 24 32 37 33 50 18 40 28 25 33 50 32 7 34 14 23 12 53 32 24 19 12 27 30 37 26 20 36 18 19 21 29 34 27 53 17 44 17 37 27 34 12 40 35 33 16 22 25 29 18 33 33 36 37 28 37 21 24 32 37 13 15 19 9 12 11 24 37 35 34 17 14 18 40 36 33 28 12 6 19 17 33 13 13 12 9 17 24 30 6 27 29 21 12 17 29 21 14 30 28 31 35 33 11 17 24 29 11 47 32 11 15 29 25 39 32 20 8 29 13 35 17 13 28 16 29 27 25 22 10 11 12 29 16 13 23 23 6 31 13 9 8 19 9 27 13 33 5 36 30 29 21 24 7 7 20 25 34 25 21 15 6 7 5 14 30 15 16 21 15 14 23 13 11 15 12 7 5 12 18 10 10 8 12 31 9 5 17 5 5 11 9 13 5 5 9 17 29 22 15 8 9 15 16 23 9 25 17 17 31 18 23 28 10 9 10 8 5 10 6 17 12 29 30 14 20 14 10 28 10 39 7 23 19 12 11 15 8 19 6 19 8 23 12 18 10 8 5 15 22 35 29 10 5 8 7 27 5 24 9 13 7 17 8 11 14 7 6 5 13 28 7 8 36 6 7 6 5 8 5 10 14 26 26 14 11 17 5 7 5 10 5 8 7 9 5 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_100342991_100344026
seq2: B6Ng01-159E09.b_44_1084

seq1  GAATTCTATTTAAATTAGGAAACAATTTAGCCATAGATACCATACTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTAAATTAGGAAACAATTTAGCCATAGATACCATACTTTCA  50

seq1  GCAGTTAAGAGACATACATAGTGGTTAATTGCAAATTTTAAACATTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAAGAGACATACATAGTGGTTAATTGCAAATTTTAAACATTTTAA  100

seq1  TTATCAAAGAATTGTGTCTTATAAAGCATTGCTGTTGTTGAAGAATTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAAGAATTGTGTCTTATAAAGCATTGCTGTTGTTGAAGAATTTGC  150

seq1  ACTCTAAAATACACATTGGTTTTAGTGTGTTTAACATAACACCTGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAAATACACATTGGTTTTAGTGTGTTTAACATAACACCTGTTATT  200

seq1  CTATGTTAAATGTGATTATTATAATGTGTACAAGTTCATGATGTATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTAAATGTGATTATTATAATGTGTACAAGTTCATGATGTATATTT  250

seq1  TCATACTGATGTGTAGTTAAGAAAATATTATTTTCCTCGTGACCTATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTGATGTGTAGTTAAGAAAATATTATTTTCCTCGTGACCTATAGG  300

seq1  TGCACGCCAGATAAGACTTGAGAAAAGTCAGGAACCTCCTACCTTTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCCAGATAAGACTTGAGAAAAGTCAGGAACCTCCTACCTTTGACA  350

seq1  GGAGACTTAAAAATAAGGAAATTAAGAATAATTTGAAGAGTGTTCTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTTAAAAATAAGGAAATTAAGAATAATTTGAAGAGTGTTCTTCAT  400

seq1  GCTACTTGGGTAAAGTAAAATATTTCTGTTAACAAGCCAGTTAAAGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTGGGTAAAGTAAAATATTTCTGTTAACAAGCCAGTTAAAGTGAC  450

seq1  CTGTGTAGTTTTCTTATAGAGTCAAGAATATGGTAAGGTGTTTAATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGTTTTCTTATAGAGTCAAGAATATGGTAAGGTGTTTAATTTAA  500

seq1  ATTTGCGTGAAAGGTTTGGAGTCTCTTAGATAAATTACTAAATTGTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCGTGAAAGGTTTGGAGTCTCTTAGATAAATTACTAAATTGTACAT  550

seq1  TTTCCTTATAATGGAAAGAAATAACTCCCTTTTTTGATATTACAAAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTATAATGGAAAGAAATAACTCCCTTTTTTGATATTACAAAAGAC  600

seq1  AGGTATAGGGTTAGAGAATAATGATTCAGAAATAATATTTTGATTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAGGGTTAGAGAATAATGATTCAGAAATAATATTTTGATTTATTT  650

seq1  TTAATTGATTTGGTACAA-TTTTGTGTTTATTCTCTCTGAAAGAATTAAT  699
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTAATTGATTTGGTACAATTTTTGTGTTTATTCTCTCTGAAAGAATTAAT  700

seq1  GGGAGATTTAATAAAATTACATGAATTGGAAGAACTCTGTGTCAGCACAT  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGAGATTTAATAAAATTTCATGAATTGGAAGAACTCTGTGTCAGCACAT  750

seq1  AGCCCCCACAACACAAATAATATCACAATATTTAAAACAAAATCCTTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCACAACACAAATAATATCACAATATTTAAAACAAAATCCTTTGT  800

seq1  TTCTCTGTATTATAAACAGGCCTGTCATAGTAGTAACAGACAT-GGGAAT  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCTCTGTATTATAAACAGGCCTGTCATAGTAGTAACAGACATGGGGAAT  850

seq1  GCATAGATAGCCACTTTTAATGCAC-TAATCCTAC-TCTGAATATATTTT  896
      ||||||||||||||||||||||||| ||||||||| ||||||||||||||
seq2  GCATAGATAGCCACTTTTAATGCACTTAATCCTACTTCTGAATATATTTT  900

seq1  TCTA-TTTATAACA-TTCTTCCTGGCATATAGATTGCACGGTGCCAATTT  944
      | || ||||||||| ||||||   ||||||||||||||||||||||||||
seq2  TTTATTTTATAACATTTCTTCTGTGCATATAGATTGCACGGTGCCAATTT  950

seq1  TCACACA-TTTTTTTTTACACTGTAAATAACACTTCCAAGAATCTTGAAA  993
      ||||||| |||||||||||  ||  ||| |||| |||||| |||||| ||
seq2  TCACACATTTTTTTTTTACCATGGTAATTACAC-TCCAAG-ATCTTGGAA  998

seq1  ATAACATCAATTGAA-TTCTCCTAACTCA-CATTAGAATTTGCAT  1036
      ||||||||||||||| ||||||| ||||| |||||| ||||||||
seq2  ATAACATCAATTGAATTTCTCCT-ACTCACCATTAG-ATTTGCAT  1041

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information