MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-161I03
Chromosome	1 (Build37)
Map Location	29,669,955 - 29,671,126
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm597, LOC435614, EG623924, EG433283
Downstream gene	LOC100040665, LOC665944
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm597 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210962 MGI:2685443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435614 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins pseudo : _no_value

name	EG623924 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623924 MGI:3647053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG433283 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433283 MGI:3646042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1509 ESTs, 4 Proteins

name	LOC100040665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins

name	LOC665944 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Gm597 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719315 GeneID:210962 MGI:2685443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 597, (NCBI) transcript_id : NM_001013750.1

name	EG623924 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82878868 GeneID:623924 MGI:3647053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG623924 transcript_id : XM_888439.1

name	EG433283 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233792 GeneID:433283 MGI:3646042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1509 ESTs, 4 Proteins product : predicted gene, EG433283, transcript variant 1 transcript_id : XM_484844.5

name	LOC100040665 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233776 GeneID:100040665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins product : similar to Electron transferring flavoprotein, alpha polypeptide transcript_id : XM_001475043.1

name	Gm597 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719316 GeneID:210962 MGI:2685443
definition	codon_start : 1 product : hypothetical protein LOC210962 protein_id : NP_001013772.1

name	EG623924 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878869 GeneID:623924 MGI:3647053
definition	codon_start : 1 product : similar to cpn10 protein protein_id : XP_893532.1

name	EG433283 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51704904 GeneID:433283 MGI:3646042
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_484844.1

name	LOC100040665 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233777 GeneID:100040665
definition	codon_start : 1 product : similar to Electron transferring flavoprotein, alpha polypeptide protein_id : XP_001475093.1

name	LOC665944 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665944
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:207141
definition	standard_name : RH126997

name	(CDS detail)
type	STS
link
xref	UniSTS:224594
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:225035
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:493314
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:254591
definition	standard_name : ORS_179

name	(CDS detail)
type	STS
link
xref	UniSTS:128892
definition	standard_name : D1Mit526

name	LOC435614 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233791 GeneID:435614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : hypothetical LOC435614 pseudo : _no_value transcript_id : XR_032225.1

clone name	MSMg01-331K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510C20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-456H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-113H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335C10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-161I03.b	B6Ng01-161I03.g
ACC	DH954600	DH954601
length	1,162	1,085
definition	DH954600\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161I03, 5' end.	DH954601\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161I03, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacttagacctatatatgcaccaaaaagaacagcaatgcctgatg tcaacatactacttatttaatagccatcgaagtttagcattggttcacta tcaaattccatactatgttttttaacatattgatatgttatttttattac aggatcctgttatatattcctaggtactcataatgacactctgtagtcaa agacactcatacaaatttaatcatcttgcattagacttccaggtaaccaa atatataaatggaagtcaaattttaaactctataaattttgtgctatatt acgttttgatcctataatttactgttactgttttgttaattcattccact ttgagttttgttcttacctcatacatgactctcttgccatcaattctcaa ttgtacttaacataatttgctgtttttctgtctgatgttttacaggttaa aaacatttctgttacatcccagtcaagtaagcagactgagcttatgcaag ttcaaaagctggacatgttcacaacagataatgtgaaaaggtatcacttt cctggagtaagtcagcaggacacggtgagctatgaaaacctttgtctgcc ttagcacactcaaaataaagttttgtctaaatgctacagtttggagttta acaacaacagcaataacaataacaaaatgtcttgcgcgcgctcgactggc caggaagaacgacgctgcaacaggatccttctgcacacgtttattgagag agcttgattgtagaggcgaaaagaccttgagcccagaactggtgctgctt ttataggcctaggaggggcgtgtctcaaacccggattggttatgcactaa gccttatttgcatgttcctcatctgattggttatactctcagtaccttac agaacctcattatcatacctcatttgcatgtctcacatctgattggttta ctctcggtaccttacagaacctcattatcatgcctgggcaggcagtgtct tgcaaaaaactttactgcatatgtacacatggtgtttgtcaatcttatgc gtgggtggcagcagtagtcagtgccacttcagcacgcacatgggccttcc caatctcccttgtttttttaataaaaatgaaggctgactagggctgtgcc aattagcccatc	gaattccttgtttacctctgtaagccattttttaaaaggggtatttggtt ttctggcatccaacttcttgatatatatatattggatattatcccccaat cagatttaggaatggtgaagctcttttacaaacctgttggttgccatttt gtcttcctgacagtatgcagtatgctttgccttgcagaagctttgcaatt ttatgaggtcccatttgttgattcttgatcttaaagcacaggccagtgct gttctgttcaagaagttttccccctgtgctctttgaggctcgtccacact ttttcctctaaaagttatagtgtctttggttttatgtgtagttccttaat ccacttatacttgagctttgtacaaggagataagaatggatcgatccaca ttcttctacagactaatggctagttgagccagtaccattaagtgaaaatg ctgtcttctatacactggatagatttagcccctttgtcaaagatcaaggg accataggtgtgtgtattcatttctgggtcttcttcaattctattccatt gatctacctgtctgtcactgtacaagtaccgtgcagtttttatcataatt actctgtagtacaccttaaggtcaggaatggtaattcctccagaggttct tttattgttgagaatggtttttgctgtcctaggtattttgttattccaga tgaactttcatattgccctttctatctctgaagaattgagttggaatttt gatggggattgcattgaatctgtagattgctttttgcaaggtagccatga ccaagggagctctttccatcttctgagatcttcttgatttcttattcaga gacttgaagttctataaagatcttcacttccttagttagagttaacacca aggtatttatattatttgtgactatatgaagatgtgttcactaatttctt tctcagaaataatccttgtgtaaaagaaaaaccacagatttctttcagta attatatccagcttctgcactgagttgttatcaggttagaggtcttgggt gaatcttggggtccactaaaaatacatcctacctc
quality values	Open. Hide. 61 47 31 39 61 29 24 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 34 32 18 22 29 24 28 26 52 45 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 34 35 44 55 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 59 55 55 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 52 61 50 61 61 53 53 61 61 47 47 47 46 43 57 57 57 57 53 53 53 45 53 53 53 53 47 57 57 53 53 53 53 57 57 57 38 53 53 57 47 57 53 53 50 57 57 38 57 42 43 53 53 57 57 53 53 46 42 57 57 53 50 57 46 57 57 53 43 53 53 53 57 57 53 53 52 37 22 47 50 53 57 45 53 53 50 52 53 57 53 42 57 57 53 45 53 57 52 41 42 57 57 57 52 42 53 53 53 57 45 53 52 37 53 45 43 47 53 53 57 53 57 28 53 30 50 57 46 36 52 45 50 50 53 27 50 53 40 50 52 30 50 52 53 53 50 50 53 53 50 57 52 50 57 57 57 36 57 38 53 57 57 52 32 38 43 40 53 53 50 53 40 30 53 36 50 46 47 13 31 39 37 40 47 57 29 52 27 23 21 37 29 28 37 42 36 41 17 34 37 28 14 52 32 36 34 40 31 48 35 40 42 31 28 36 29 41 28 32 57 48 37 37 44 37 40 30 43 28 53 18 33 29 27 40 29 18 33 26 21 32 22 53 21 35 32 25 48 57 57 48 28 38 12 32 29 40 32 29 18 41 47 32 23 26 34 30 24 33 32 46 22 44 35 36 32 22 38 51 51 43 31 36 29 28 31 17 29 29 28 9 39 32 26 46 45 35 30 24 29 29 25 30 29 30 33 48 29 23 39 16 16 20 39 25 34 29 34 23 30 23 28 28 25 29 33 31 27 33 28 34 38 19 33 20 15 51 33 12 23 29 28 36 21 27 35 32 28 28 28 28 28 29 29 38 27 20 29 46 17 31 22 26 31 31 31 35 31 25 23 22 35 28 14 32 17 34 28 28 22 18 29 32 15 30 33 30 22 30 31 31 25 23 18 34 28 23 29 28 27 28 23 51 29 15 28 23 20 29 15 26 24 26 23 30 21 27 23 12 16 31 19 20 25 15 10 28 23 6 12 24 23 24 29 20 33 26 27 31 28 27 29 22 21 14 26 34 28 27 7 16 24 21 28 26 31 23 24 27 31 36 16 27 29 20 42 13 5 14 13 19 15 19 12 9 15 7 20 15 29 12 8 25 44 44 44 44 24 25 26 39 21 12 23 16 33 19 26 10 14 13 11 4 4 12 9 13 6 9 4 6 4 6 7 42 11 29 26 29 9 17 10 29 23 9 14 15 16 6 5 10 9 28 23 13 14 3 5 9 24 26 29 18 22 6 5 17 14 11 5 5 19 20 15 9 7 8 15 9 9 8 8 12 7 16 4 4 7 7 9 8 4 3 7 6 21 8 24 27 9 15 4 2 5 7 21 24 26 9 6 10 7 11 6 4 6 11 18 5 10 5 5 21 32 24 20 5 6 6 8 6 9 10 10 21 5 5 5 6 9 20 4 23 5 15 7 7 4 7 20 13 6 10 6 12 13 12 4 5 6 17	Open. Hide. 61 61 55 38 61 35 37 34 31 49 27 49 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 55 55 61 47 61 61 61 61 61 61 61 61 61 55 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 50 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 39 61 61 52 52 43 35 27 33 34 61 42 61 33 61 52 61 61 61 61 61 57 53 57 53 57 53 53 42 57 57 50 57 57 57 57 53 57 57 57 53 57 57 47 57 57 53 53 40 57 53 57 57 53 57 53 57 57 43 43 53 57 57 53 53 57 53 53 53 57 52 57 53 57 52 53 50 57 45 43 57 57 45 52 47 27 57 53 53 38 52 57 53 33 57 43 53 52 46 57 57 57 53 45 45 53 45 41 52 53 52 52 53 53 50 57 53 53 45 57 40 42 37 45 45 47 46 43 41 37 33 44 46 21 50 45 32 53 53 53 38 57 57 24 45 52 50 53 42 52 40 41 46 30 24 53 24 41 18 43 50 29 57 57 52 34 52 37 57 33 41 42 53 31 52 52 30 46 29 13 53 57 57 41 23 31 52 52 30 40 52 31 37 13 46 35 32 23 57 57 43 30 24 37 36 32 40 44 37 29 36 52 22 27 38 29 28 40 57 44 37 30 40 36 30 52 53 23 57 37 32 57 24 32 34 33 37 37 39 43 40 31 40 40 19 53 37 28 36 30 47 24 37 33 44 30 30 33 37 57 57 51 32 33 27 47 57 57 28 40 13 30 29 24 24 32 32 24 28 32 30 34 37 43 27 38 28 29 15 33 38 33 48 51 51 51 40 32 29 23 16 16 26 10 32 17 30 36 19 32 29 32 21 30 27 26 26 47 20 31 20 28 29 31 25 51 12 7 37 17 21 18 19 27 29 27 27 33 14 29 14 11 5 25 29 30 17 22 29 19 51 27 29 43 46 13 29 18 28 19 22 46 15 35 31 22 32 26 35 39 29 33 25 13 39 14 32 19 51 39 29 27 25 26 51 28 28 21 29 27 23 29 31 15 33 18 22 26 29 28 28 41 20 14 33 20 23 29 18 18 22 5 33 13 46 13 23 23 51 33 7 21 23 27 20 23 19 42 28 24 12 21 29 28 23 17 24 7 9 11 31 23 8 12 19 30 46 25 24 41 14 19 33 24 23 23 25 14 5 5 5 38 28 17 12 15 12 6 25 34 31 38 9 25 27 19 23 21 16 9 8 22 12 6 5 10 12 14 7 51 51 51 29 18 19 19 14 5 5 26 13 34 18 26 7 37 26 23 19 8 22 6 15 44 16 6 12 19 15 17 26 14 19 28 9 5 13 9 33 8 5 10 11 16 26 12 20 8 19 6 28 3 4 18 20 21 26 7 29 18 29 10 8 22 5 7 4 4 4 10 23 5 17 7 10 10 4 22 6 27 42 37 23 5 8 5 12 5 21 12 14 35 9 8 11 5 10 3 5 3 3 4 4 3 4 2 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_29669955_29671126
seq2: B6Ng01-161I03.b_44_1205 (reverse)

seq1  GATGGGCATAATT-GCACAGGCCTAGTCCAGCC-TCA-TTTTATTAAAAC  47
      ||||||| ||||| |||||| |||||| ||||| ||| ||||||||||| 
seq2  GATGGGC-TAATTGGCACAGCCCTAGT-CAGCCTTCATTTTTATTAAAA-  47

seq1  AAACAGGGGGAGATGTGGGAAGCCACATGTGCCGTTGCTG-AGTGGCACT  96
      |||||  ||||||| ||||||| | |||||||   ||||| |||||||||
seq2  AAACA-AGGGAGAT-TGGGAAGGCCCATGTGC--GTGCTGAAGTGGCACT  93

seq1  GACTACTGCTGGCCACCACGCATAAGATTGGACAAACAACCAATGTGTAC  146
      ||||||||||| |  |||||||||||||| ||||||||  | ||||||||
seq2  GACTACTGCTGCCACCCACGCATAAGATT-GACAAACA--CCATGTGTAC  140

seq1  ATATGCAGTAAAGTTTTTTTGCAAAGACACTGCCTGGCCCAGGCATGATA  196
      ||||||||||||| |||||||| |||||||||||| ||||||||||||||
seq2  ATATGCAGTAAAG-TTTTTTGC-AAGACACTGCCT-GCCCAGGCATGATA  187

seq1  ATGAGGTTCTGTAAGGTACCGAGAGTAAAACCAATCAGATGTGAGACATG  246
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGAGGTTCTGTAAGGTACCGAGAGT-AAACCAATCAGATGTGAGACATG  236

seq1  CAAATGAGGTATGATAATGAGGTTCTGTAAGGTACTGAGAGTATAACCAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGGTATGATAATGAGGTTCTGTAAGGTACTGAGAGTATAACCAA  286

seq1  TCAGATGAGGAACATGCAAATAAGGCTTAGTGCATAACCAATCCGGGTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGAGGAACATGCAAATAAGGCTTAGTGCATAACCAATCCGGGTTT  336

seq1  GAGACACGCCCCTCCTAGGCCTATAAAAGCAGCACCAGTTCTGGGCTCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACGCCCCTCCTAGGCCTATAAAAGCAGCACCAGTTCTGGGCTCAA  386

seq1  GGTCTTTTCGCCTCTACAATCAAGCTCTCTCAATAAACGTGTGCAGAAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTCGCCTCTACAATCAAGCTCTCTCAATAAACGTGTGCAGAAGG  436

seq1  ATCCTGTTGCAGCGTCGTTCTTCCTGGCCAGTCGAGCGCGCGCAAGACAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTGCAGCGTCGTTCTTCCTGGCCAGTCGAGCGCGCGCAAGACAT  486

seq1  TTTGTTATTGTTATTGCTGTTGTTGTTAAACTCCAAACTGTAGCATTTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATTGTTATTGCTGTTGTTGTTAAACTCCAAACTGTAGCATTTAG  536

seq1  ACAAAACTTTATTTTGAGTGTGCTAAGGCAGACAAAGGTTTTCATAGCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTTATTTTGAGTGTGCTAAGGCAGACAAAGGTTTTCATAGCTC  586

seq1  ACCGTGTCCTGCTGACTTACTCCAGGAAAGTGATACCTTTTCACATTATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGTCCTGCTGACTTACTCCAGGAAAGTGATACCTTTTCACATTATC  636

seq1  TGTTGTGAACATGTCCAGCTTTTGAACTTGCATAAGCTCAGTCTGCTTAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGAACATGTCCAGCTTTTGAACTTGCATAAGCTCAGTCTGCTTAC  686

seq1  TTGACTGGGATGTAACAGAAATGTTTTTAACCTGTAAAACATCAGACAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGGGATGTAACAGAAATGTTTTTAACCTGTAAAACATCAGACAGA  736

seq1  AAAACAGCAAATTATGTTAAGTACAATTGAGAATTGATGGCAAGAGAGTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAAATTATGTTAAGTACAATTGAGAATTGATGGCAAGAGAGTC  786

seq1  ATGTATGAGGTAAGAACAAAACTCAAAGTGGAATGAATTAACAAAACAGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGAGGTAAGAACAAAACTCAAAGTGGAATGAATTAACAAAACAGT  836

seq1  AACAGTAAATTATAGGATCAAAACGTAATATAGCACAAAATTTATAGAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAAATTATAGGATCAAAACGTAATATAGCACAAAATTTATAGAGT  886

seq1  TTAAAATTTGACTTCCATTTATATATTTGGTTACCTGGAAGTCTAATGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTGACTTCCATTTATATATTTGGTTACCTGGAAGTCTAATGCA  936

seq1  AGATGATTAAATTTGTATGAGTGTCTTTGACTACAGAGTGTCATTATGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATTAAATTTGTATGAGTGTCTTTGACTACAGAGTGTCATTATGAG  986

seq1  TACCTAGGAATATATAACAGGATCCTGTAATAAAAATAACATATCAATAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGGAATATATAACAGGATCCTGTAATAAAAATAACATATCAATAT  1036

seq1  GTTAAAAAACATAGTATGGAATTTGATAGTGAACCAATGCTAAACTTCGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAACATAGTATGGAATTTGATAGTGAACCAATGCTAAACTTCGA  1086

seq1  TGGCTATTAAATAAGTAGTATGTTGACATCAGGCATTGCTGTTCTTTTTG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTAAATAAGTAGTATGTTGACATCAGGCATTGCTGTTCTTTTTG  1136

seq1  GTGCATATATAGGTCTAAGTGAATTC  1172
      ||||||||||||||||||||||||||
seq2  GTGCATATATAGGTCTAAGTGAATTC  1162

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information