BAC Information

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BAC

Clone NameB6Ng01-162I13
Chromosome1 (Build37)
Map Location 46,686,473 - 46,806,438
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855
Downstream geneSlc39a10, EG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162I13.bB6Ng01-162I13.g
ACCDH955350DH955351
length8711,021
definitionDH955350|Mus musculus domesticus DNA, BAC clone: B6Ng01-162I13, 5' end.DH955351|Mus musculus domesticus DNA, BAC clone: B6Ng01-162I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,805,564 - 46,806,438)(46,686,473 - 46,687,497)
sequence
gaattctttgttagcttacatttgagtacttggttaaatcctttggttag
acctcagtaatttgcaaagttcttaaaggtgataataaattatttagtaa
aattagctgtatggtcatgtaaattttaatagagacaaatagggtatttt
tgttttattgtttgtttgtttgtttgttttaagaatggggcattgtattg
aggttatcctcagactcactgttcagactgagctctgctcaggctcataa
tcctcttgccctagcttcctaagtgcggggattataggtgccaccacaca
aggctctaaaaacagacttttaaactaaaatatataaaagtttaagtaac
aaagtcttcttaatttatattaactactctgaaattctgtcttgtcttgc
cttgccttaattaatttcactgtctggttttaatgagtatacgtatatgt
tcccatgtagaatagtaaataaatccatgacatcctgatagtgttactga
tctatacaagcatcatcaggctaggaggatactgaacaggggctccacac
acatggcaagcttcaaatcctaccttcaattttaccccataaaattgtgg
aggttttggtgctttgctggggcatactctgggaaagctactcctcctga
ttataagaatcctatttctacctctgaccatggagagacatgataggcta
accttactcaaaaactagaacatgacttactataacctcctcctctgcac
ggaatacaactggggctagactcgtgatcctctcgagttagatcttgatt
aagttatctatacccggagaatctttgacacgcctatagtatcttggtat
ataccccggaccctcgccagt
gaattctccctgggtctagacttggcagggcacatatcttcatggaagaa
atcaacagggaaagacaagtgttctgcctaaagttttccttccataccct
tggtgctgaaacacagaacaaattttgcggaaacgaaagctgcatttcct
tccagagggtgggagtgtgtgtcagtggacatgttcatgtgtaatagtgc
ttctgtgtttagtgatgtctctctcaagtggagtgtgctttacatttcca
gtcaggaaaatttcctgtgtaagtcaacgtcatgtactgcaggtcacctc
caacccgagtgagatgtctacacacaactctcacctcacccagcaaaaag
atgagtatgtctagtctttacctgacccgagagtcaaggaatattcattg
gtcttggttgagaatccccggatgacaaatttccgcattgtcttcttctt
tcttggctatcctcaaagtacttgaatgctattgtgtgaaaggtactttt
atttagaaaccattacatttcactatggatggcatactgtgagtgtgtgt
ataagtgtgtgtgtgtctgtgtgagtacactggagatcaagtgatcaagt
accggccttgcttatgttaatcatatacctacacatatcaattaactgcc
catgctgcatccaataatattgccaagaatatcatgcctgtaaggccagc
ctataccacatggcaccctacagaccagcctgatacatgcacaaaacctt
gcctacctacatttcatgtccccaatagcaaacgtgagcaagtgccatcg
ccgtcttcgttttatgtcagaccactgcaacacgagatgaaaaaaaactt
gtatctgtggcatgtgcattagcaccgggatcctggcacgacaggctaca
atgccctagggagctaactgatttagctgatggacacattgatttggtga
gtcagattataatatgcagaccacgcatatgctttctcattgactacatc
tgaagatttgccgttatcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46805564_46806438
seq2: B6Ng01-162I13.b_43_913 (reverse)

seq1  ACTGGGAGAGGGTCTGGGGTATATACCAAGATACTATACCAGTGTCAAAG  50
      ||| || ||||||| |||||||||||||||||||||||   |||||||||
seq2  ACT-GGCGAGGGTCCGGGGTATATACCAAGATACTATAGGCGTGTCAAAG  49

seq1  ATTCTCCGTGTCTAGATAACTCAACTCAAAATTTAACTCGAGAGGATCAC  100
      |||||||| || ||||||||| || |||| || |||||||||||||||||
seq2  ATTCTCCGGGTATAGATAACTTAA-TCAAGATCTAACTCGAGAGGATCAC  98

seq1  AGCTCTAGGCCCAGTTGTATTACCTGTAGAGGAGGAGGTAATAGTAAGTC  150
         ||||| |||||||||||| | || |||||||||||| ||||||||||
seq2  GAGTCTAGCCCCAGTTGTATTCCGTGCAGAGGAGGAGGTTATAGTAAGTC  148

seq1  ATTTTCTAGTCTTTGCGGAAGATTAGACTATCATGTCTCTCCCTGGTCAG  200
      || ||||||| |||| | ||| |||| ||||||||||||||| |||||||
seq2  ATGTTCTAGTTTTTGAGTAAGGTTAGCCTATCATGTCTCTCCATGGTCAG  198

seq1  AGGTAGAAATAGGATTCTTATAATCAGGAGGAGTAGCTTTCCCAGAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAAATAGGATTCTTATAATCAGGAGGAGTAGCTTTCCCAGAGTAT  248

seq1  GCCCCAGCAAAGCACCAAAACCTCCACAATTTTATGGGGTAAAATTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCAAAGCACCAAAACCTCCACAATTTTATGGGGTAAAATTGAAG  298

seq1  GTAGGATCTGAAGCTTGCCATGTGTGTGGAGCCCCTGTTCAGTATCCTCC  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATTTGAAGCTTGCCATGTGTGTGGAGCCCCTGTTCAGTATCCTCC  348

seq1  TAGCCTGATGATGCTTGTCTAGATCAGTAACACTATCATGATGTCATGGA  400
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  TAGCCTGATGATGCTTGTATAGATCAGTAACACTATCAGGATGTCATGGA  398

seq1  TTTATTTACTATTCTACATGGGAACATATACGTATACTCATTAAAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTACTATTCTACATGGGAACATATACGTATACTCATTAAAACCAG  448

seq1  ACAGTGAAATTAATTAAGGCAAGGCAAGACAAGACAGAATTTCAGAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAATTAATTAAGGCAAGGCAAGACAAGACAGAATTTCAGAGTAG  498

seq1  TTAATATAAATTAAGAAGACTTTGTTACTTAAACTTTTATATATTTTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAAATTAAGAAGACTTTGTTACTTAAACTTTTATATATTTTAGT  548

seq1  TTAAAAGTCTGTTTCTAGAGCCTTGTGTGGTGGCACCTATAATCCCTGCA  600
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  TTAAAAGTCTGTTTTTAGAGCCTTGTGTGGTGGCACCTATAATCCCCGCA  598

seq1  CTTAGGAAGCTAGGGCAAGAGGATTATGAGCCTGAGCAGAGCTCAGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAAGCTAGGGCAAGAGGATTATGAGCCTGAGCAGAGCTCAGTCTG  648

seq1  AACAGTGAGTTTGAGGATAACCTCAATACAATGCCCCATTCTTAAAACAA  700
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAGTCTGAGGATAACCTCAATACAATGCCCCATTCTTAAAACAA  698

seq1  ACAAACAAACAAACAATAAAACAAAAATACCCTATTTGTCTCTATTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAATAAAACAAAAATACCCTATTTGTCTCTATTAAAA  748

seq1  TTTACATGACCATACAGCTAATTTTACTAAATAATTTATTATCACCTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGACCATACAGCTAATTTTACTAAATAATTTATTATCACCTTTA  798

seq1  AGAACTTTGCAAATTACTGAGGTCTAACCATTTGGATTTAACCATCTTAC  850
      ||||||||||||||||||||||||||||||   |||||||||||   |||
seq2  AGAACTTTGCAAATTACTGAGGTCTAACCA-AAGGATTTAACCA-AGTAC  846

seq1  TCAAATGTAAGCTAACAAAGAATTC  875
      |||||||||||||||||||||||||
seq2  TCAAATGTAAGCTAACAAAGAATTC  871

seq1: chr1_46686473_46687497
seq2: B6Ng01-162I13.g_67_1087

seq1  GAATTCTCCCTGGGTCTAGACTTGGCAGGGCACATATCTTCATGGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTGGGTCTAGACTTGGCAGGGCACATATCTTCATGGAAGAA  50

seq1  ATCAACAGGGAAAGACAAGTGTTCTGCCTAAAGTTTTCCTTCCATACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAGGGAAAGACAAGTGTTCTGCCTAAAGTTTTCCTTCCATACCCT  100

seq1  TGGTGCTGAAACACAGAACAAATTTTGCAGAAACGAAAGCTGCATTTCCT  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGTGCTGAAACACAGAACAAATTTTGCGGAAACGAAAGCTGCATTTCCT  150

seq1  TCCAGAGGGTGGGAGTGTGTGTCAGTGGACATGTTCATGTGTAATAGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGGTGGGAGTGTGTGTCAGTGGACATGTTCATGTGTAATAGTGC  200

seq1  TTCTGTGTTTAGTGATGTCTCTCTCAAGTGGAGTGTGCTTTACATTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTTTAGTGATGTCTCTCTCAAGTGGAGTGTGCTTTACATTTCCA  250

seq1  GTCAGGAAAATTTCCTGTGTAAGTCAACGTCATGTACTGCAGGTCACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAAATTTCCTGTGTAAGTCAACGTCATGTACTGCAGGTCACCTC  300

seq1  CAACCCGAGTGAGATGTCTACACACAACTCTCACAGCAGCAAGCAGAAAG  350
      ||||||||||||||||||||||||||||||||||  || | |||| ||||
seq2  CAACCCGAGTGAGATGTCTACACACAACTCTCACCTCACCCAGCAAAAAG  350

seq1  ATGAGTATGTCTAGTCTTTACCTGACAGGAGAGTCAAGGAATATTCATTG  400
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  ATGAGTATGTCTAGTCTTTACCTGACCCGAGAGTCAAGGAATATTCATTG  400

seq1  GTCTTGGTTGAGAAGCACCGGATGACAAATTTCCACATTGTCTTCTTCTT  450
      |||||||||||||| | ||||||||||||||||| |||||||||||||||
seq2  GTCTTGGTTGAGAATCCCCGGATGACAAATTTCCGCATTGTCTTCTTCTT  450

seq1  TCAGGGCTATCCTCAAAGTACTTGAATGCTATTGTGTGAAAGGTACTTTT  500
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTATCCTCAAAGTACTTGAATGCTATTGTGTGAAAGGTACTTTT  500

seq1  ATTTAGAAACCATTACATTTCACTATGGATGGCATACTGTGAGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAACCATTACATTTCACTATGGATGGCATACTGTGAGTGTGTGT  550

seq1  ATAAGTGTGTGTGTGTCTGTGTGAGTACACTGGAGATCAAGTGATCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGTGTGTGTGTCTGTGTGAGTACACTGGAGATCAAGTGATCAAGT  600

seq1  AAGGGCCTTGCTTATGTTAAGCATATACCTACACATATCAATTAACTGCC  650
      |  ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACCGGCCTTGCTTATGTTAATCATATACCTACACATATCAATTAACTGCC  650

seq1  CAGCCTGGATCAAATAATATTGCCAAGAATATCATGCCTGTGATGCCAGC  700
      ||  ||| ||| ||||||||||||||||||||||||||||| | ||||||
seq2  CATGCTGCATCCAATAATATTGCCAAGAATATCATGCCTGTAAGGCCAGC  700

seq1  CTATACCACATGGCAAACTACAGACCAGCCTGATACATGCACAAAACCTT  750
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  CTATACCACATGGCACCCTACAGACCAGCCTGATACATGCACAAAACCTT  750

seq1  GCCTACCTACATTTCATGTCCCCAATAGCAAAGGGGAGCAAGTGGCATCA  800
      |||||||||||||||||||||||||||||||| | ||||||||| |||| 
seq2  GCCTACCTACATTTCATGTCCCCAATAGCAAACGTGAGCAAGTGCCATCG  800

seq1  CCGTCTTCATTTTATGTCAGTCCAAGTGCAACACAAAGATGACAAAAAAC  850
      |||||||| ||||||||||| || | ||||||||  |||||| |||||||
seq2  CCGTCTTCGTTTTATGTCAGACC-ACTGCAACAC-GAGATGAAAAAAAAC  848

seq1  TTGTATCTGTGGCATGTGCATGAGCACCGGGATCCTGGCCAGCCAGGCTA  900
      ||||||||||||||||||||| |||||||||||||||||  | |||||||
seq2  TTGTATCTGTGGCATGTGCATTAGCACCGGGATCCTGGCACGACAGGCTA  898

seq1  CAGTGCCCCAAGGGAGCTTACTGATTTAGTTGAGGGAGTGATTAAATTGG  950
      || || ||| |||||||| |||||||||| ||| |||   ||| | ||||
seq2  CAATG-CCCTAGGGAGCTAACTGATTTAGCTGATGGACACATTGATTTGG  947

seq1  TAGCTCAAATTTTTAAAATACAACTCAGGCATATGCTTTCTCATTAACTA  1000
      |   ||| | || ||| || ||   || ||||||||||||||||| ||||
seq2  TGAGTCAGA-TTATAATATGCAGACCACGCATATGCTTTCTCATTGACTA  996

seq1  CCTCTGAAATTTCACCTTTATCTTC  1025
      | ||||||  ||  || ||||||||
seq2  CATCTGAAGATTTGCCGTTATCTTC  1021