MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-162J17
Chromosome	1 (Build37)
Map Location	179,616,720 - 179,617,870
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cep170, Sdccag8, LOC666235, Akt3, Zfp238, EG631449, LOC100040770
Downstream gene	1700016C15Rik, Adss, EG631584, EG545391, LOC666262, 5830417C01Rik, LOC666284, 4930527J03Rik, LOC666295, B230369F24Rik, LOC669454, 2310005N03Rik, Hnrpu, Efcab2, D230039L06Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cep170 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545389 MGI:1918348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 99 ESTs, 2 Proteins

name	Sdccag8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76816 MGI:1924066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 3 Proteins pseudo : _no_value

name	Akt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23797 MGI:1345147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp238 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30928 MGI:1353609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG631449 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631449 MGI:3644357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040770 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	1700016C15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69428 MGI:1916678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adss (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11566 MGI:87948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG631584 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631584 MGI:3647531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	EG545391 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545391 MGI:3648036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666262 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins pseudo : _no_value

name	5830417C01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78825 MGI:1926075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666284 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins pseudo : _no_value

name	4930527J03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75164 MGI:1922414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC666295 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 581 ESTs, 3 Proteins pseudo : _no_value

name	B230369F24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320110 MGI:2443392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	LOC669454 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	2310005N03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66359 MGI:1913609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnrpu (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51810 MGI:1858195
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Efcab2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68226 MGI:1915476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D230039L06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240945 MGI:3045335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cep170 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149245432 GeneID:545389 MGI:1918348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 99 ESTs, 2 Proteins product : centrosomal protein 170, transcript variant 9 transcript_id : XM_989868.2

name	Sdccag8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031983 GeneID:76816 MGI:1924066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serologically defined colon cancer antigen 8 transcript_id : NM_029756.2

name	Akt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45433563 GeneID:23797 MGI:1345147
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymoma viral proto-oncogene 3 transcript_id : NM_011785.2

name	Zfp238 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59889575 GeneID:30928 MGI:1353609
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 238 transcript_id : NM_001012330.1

name	Zfp238 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59889573 GeneID:30928 MGI:1353609
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 238 transcript_id : NM_013915.3

name	1700016C15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371784 GeneID:69428 MGI:1916678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700016C15 gene transcript_id : NM_027077.2

name	Adss (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801876 GeneID:11566 MGI:87948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylosuccinate synthetase, non muscle transcript_id : NM_007422.3

name	EG631584 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149245378 GeneID:631584 MGI:3647531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : predicted gene, EG631584 transcript_id : XM_982472.2

name	EG545391 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350437 GeneID:545391 MGI:3648036
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG545391 transcript_id : NM_001034899.2

name	5830417C01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637811 GeneID:78825 MGI:1926075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5830417C01 gene transcript_id : NM_024282.3

name	4930527J03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364560 GeneID:75164 MGI:1922414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930527J03 gene transcript_id : XM_982795.1

name	LOC669454 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149245441 GeneID:669454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical LOC669454 transcript_id : XM_001478186.1

name	2310005N03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887807 GeneID:66359 MGI:1913609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310005N03 gene transcript_id : NM_025511.2

name	Hnrpu (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7949050 GeneID:51810 MGI:1858195
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein U transcript_id : NM_016805.1

name	Efcab2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541840 GeneID:68226 MGI:1915476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EF-hand calcium binding domain 2 transcript_id : NM_026626.2

name	D230039L06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803292 GeneID:240945 MGI:3045335
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D230039L06 gene transcript_id : NM_177724.3

name	Cep170 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364537 GeneID:545389 MGI:1918348
definition	codon_start : 1 product : centrosomal protein 170kDa isoform 9 protein_id : XP_994962.1

name	Sdccag8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789245 GeneID:76816 MGI:1924066
definition	GO_component : GO:0005813 - centrosome [Evidence IDA] codon_start : 1 product : centrosomal colon cancer autoantigen protein_id : NP_084032.1

name	Akt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45433564 GeneID:23797 MGI:1345147
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : PKB gamma product : thymoma viral proto-oncogene 3 protein_id : NP_035915.2

name	Zfp238 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59889576 GeneID:30928 MGI:1353609
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : zinc finger protein 238 isoform 1 protein_id : NP_001012330.1

name	Zfp238 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59889574 CCDS:CCDS15553.1 GeneID:30928 MGI:1353609
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 238 isoform 2 protein_id : NP_038943.3

name	1700016C15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374150 GeneID:69428 MGI:1916678
definition	codon_start : 1 product : hypothetical protein LOC69428 protein_id : NP_081353.1

name	Adss (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560737 CCDS:CCDS15555.1 GeneID:11566 MGI:87948
definition	GO_function : GO:0004019 - adenylosuccinate synthase activity [Evidence IDA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006164 - purine nucleotide biosynthesis [Evidence IDA] codon_start : 1 note : adenylosuccinate synthetase 2, non muscle product : adenylosuccinate synthetase, non muscle protein_id : NP_031448.2

name	EG631584 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149245379 GeneID:631584 MGI:3647531
definition	codon_start : 1 product : similar to chromosome 1 open reading frame 101 protein_id : XP_987566.2

name	EG545391 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91064861 GeneID:545391 MGI:3648036
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC545391 protein_id : NP_001030071.1

name	5830417C01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313498 GeneID:78825 MGI:1926075
definition	codon_start : 1 product : hypothetical protein LOC78825 protein_id : NP_077244.1

name	4930527J03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364561 GeneID:75164 MGI:1922414
definition	codon_start : 1 product : hypothetical protein LOC75164 protein_id : XP_987889.1

name	LOC669454 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149245442 GeneID:669454
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478236.1

name	2310005N03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313516 CCDS:CCDS15556.1 GeneID:66359 MGI:1913609
definition	codon_start : 1 product : RIKEN cDNA 2310005N03 protein_id : NP_079787.1

name	Hnrpu (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949051 GeneID:51810 MGI:1858195
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : nuclear matrix protein sp120; scaffold attachment factor A product : heterogenous nuclear ribonucleoprotein U protein_id : NP_058085.1

name	Efcab2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386110 CCDS:CCDS15557.1 GeneID:68226 MGI:1915476
definition	codon_start : 1 product : EF-hand calcium binding domain 2 protein_id : NP_080902.1

name	D230039L06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244198 CCDS:CCDS15558.1 GeneID:240945 MGI:3045335
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC240945 protein_id : NP_808392.1

name	EG631449 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631449
definition	number : 5 pseudo : _no_value

name	EG631449 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631449
definition	number : 4 pseudo : _no_value

name	EG631449 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631449
definition	number : 3 pseudo : _no_value

name	EG631449 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631449
definition	number : 2 pseudo : _no_value

name	EG631449 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631449
definition	number : 1 pseudo : _no_value

name	LOC100040770 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040770
definition	number : 2 pseudo : _no_value

name	LOC100040770 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040770
definition	number : 1 pseudo : _no_value

name	B230369F24Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:320110
definition	number : 1

name	(CDS detail)
type	STS
link
xref	UniSTS:158897
definition	standard_name : AU045220

name	(CDS detail)
type	STS
link
xref	UniSTS:245764
definition	standard_name : BF396392

name	(CDS detail)
type	STS
link
xref	UniSTS:498761
definition	standard_name : Hmga2

name	(CDS detail)
type	STS
link
xref	UniSTS:256676
definition	standard_name : Hmga2

name	(CDS detail)
type	STS
link
xref	UniSTS:160034
definition	standard_name : X58380

name	(CDS detail)
type	STS
link
xref	UniSTS:234273
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234274
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:164141
definition	standard_name : AI851531

name	(CDS detail)
type	STS
link
xref	UniSTS:124131
definition	standard_name : 35.MMHAP18FRD11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128718
definition	standard_name : D1Mit359

name	(CDS detail)
type	STS
link
xref	UniSTS:151302
definition	standard_name : D1S1950E

name	(CDS detail)
type	STS
link
xref	UniSTS:128547
definition	standard_name : D1Mit207

name	(CDS detail)
type	STS
link
xref	UniSTS:128717
definition	standard_name : D1Mit358

name	(CDS detail)
type	STS
link
xref	UniSTS:128766
definition	standard_name : D1Mit404

name	(CDS detail)
type	STS
link
xref	UniSTS:128448
definition	standard_name : D1Mit115

name	(CDS detail)
type	STS
link
xref	UniSTS:116742
definition	standard_name : D1Mit165

name	(CDS detail)
type	STS
link
xref	UniSTS:234275
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178526
definition	standard_name : AI314886

name	(CDS detail)
type	STS
link
xref	UniSTS:185459
definition	standard_name : BB116930

name	(CDS detail)
type	STS
link
xref	UniSTS:185459
definition	standard_name : BB116930

name	(CDS detail)
type	STS
link
xref	UniSTS:125222
definition	standard_name : MHAa54g11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178528
definition	standard_name : AU023525

name	(CDS detail)
type	STS
link
xref	UniSTS:128731
definition	standard_name : D1Mit371.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128730
definition	standard_name : MT3631

name	(CDS detail)
type	STS
link
xref	UniSTS:180818
definition	standard_name : AI503316

name	(CDS detail)
type	STS
link
xref	UniSTS:210048
definition	standard_name : RH136053

name	(CDS detail)
type	STS
link
xref	UniSTS:277316
definition	standard_name : HNRPU_1518

name	(CDS detail)
type	STS
link
xref	UniSTS:162544
definition	standard_name : RH125798

name	(CDS detail)
type	STS
link
xref	UniSTS:268990
definition	standard_name : MARC_26419-26420:1036768776:5

name	(CDS detail)
type	STS
link
xref	UniSTS:162314
definition	standard_name : RH125496

name	(CDS detail)
type	STS
link
xref	UniSTS:31692
definition	standard_name : WI-7584

name	(CDS detail)
type	STS
link
xref	UniSTS:79572
definition	standard_name : WI-8450

name	(CDS detail)
type	STS
link
xref	UniSTS:178527
definition	standard_name : AW557595

name	(CDS detail)
type	STS
link
xref	UniSTS:162363
definition	standard_name : RH125549

name	(CDS detail)
type	STS
link
xref	UniSTS:268469
definition	standard_name : MARC_20677-20678:1024509130:1

name	(CDS detail)
type	STS
link
xref	UniSTS:49593
definition	standard_name : A007A33

name	(CDS detail)
type	STS
link
xref	UniSTS:10169
definition	standard_name : D14S1285

name	(CDS detail)
type	STS
link
xref	UniSTS:207257
definition	standard_name : C86794

name	(CDS detail)
type	STS
link
xref	UniSTS:128922
definition	standard_name : D1Mit62

name	(CDS detail)
type	STS
link
xref	UniSTS:128449
definition	standard_name : D1Mit116

name	(CDS detail)
type	STS
link
xref	UniSTS:128767
definition	standard_name : D1Mit405

name	LOC666235 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149245433 GeneID:666235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 3 Proteins product : similar to Hmga2 protein pseudo : _no_value transcript_id : XR_033524.1

name	LOC666262 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149245436 GeneID:666262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins product : similar to translin associated protein X pseudo : _no_value transcript_id : XR_033555.1

name	LOC666284 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149245437 GeneID:666284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins product : similar to developmental pluripotency-associated 2 pseudo : _no_value transcript_id : XR_033578.1

name	LOC666295 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149245440 GeneID:666295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 581 ESTs, 3 Proteins product : similar to histone pseudo : _no_value transcript_id : XR_033583.1

clone name	MSMg01-430G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-483F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-182M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384K12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-484C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189G13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-272H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502C14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-158G21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-264E13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-487A15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-347L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-111I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-540F03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-338C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-540M16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112G10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-292C06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272L23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-485J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-301I16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-426H18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-331B13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-485N24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448D23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-427A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-111I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-153H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272F22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-317G04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-129F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-234J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131E03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-162J17.b	B6Ng01-162J17.g
ACC	DH955403	DH955404
length	1,215	1,132
definition	DH955403\|Mus musculus domesticus DNA, BAC clone: B6Ng01-162J17, 5' end.	DH955404\|Mus musculus domesticus DNA, BAC clone: B6Ng01-162J17, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctacccaactcattctatgaagccacaattactctgatacctaaa ccacagaaagatccaacaaagatagagaactttagaccaatttcccttat gaatatcgatacaaaaatcctcaataaaattctcactaacctaatccaag aacacattaaagcaatcatccatcctgaccaagtaggtttcattccaggg atgcagggatggtttaatatatgaaaatccatcaatgtaatccattatgt aaacaaactcaaagactaaaaccacatgatcatctcgttagatgcggaaa aagcattcgacaatatccaacacccattcgtgataaaagtcttggaaaga tcaggaattcaaggcccatacctaaacatgataaaagcaatctacagtaa accagtagccaacatcaaagtaaatggtgagaagcttgaagcaatcccac taagatcagggaatagacaaggctgcccactttctctctaccccttcaac atagtacttggagtactagccagagcaattcgacaacaaaaggagatcaa ggggatacaaattggaaaagaggaactcaaaatatcactttttgcagatg atatgatagtatatataagtgaccctaaaaattccaccagagaactccta aacctgataaacagcttcggtgaagtagctggatataaaataaactcaaa caagtcaatgccctttctctacacaaagaataaacaggctgagaaagaaa tcagggaaacaacacccttctcaatagtcacaaataatataaaatatctt ggtgtgactctaactaagtaagtgaaagatctgtatgataagaacttcaa gtctctgaagaaagaaattaaagaagatctcagaagatgggaaagatctc ccatgctcatggattggcaggatcacattgtaaaaatggctatcttgcca aagcaatctacagattcaatgcatccccatcaaaatccaactcattctca aagaattagaagggcattggcagatcatctgatacaaaactagatagcaa agctctctcagataaagtaccttggttgaatcccatgctgacctaaagct ttactacgacattggtgataaaactgcatggtactgtaattgacagacag tagcatgggaggtattggagagaactcagaaatgtgcatcccacacaccc atatgggtcacactg	gaattcactgcttgtctccctggtacatgaggtgaacttagggtgcctct gacagcaagatcaatagctttacacagagagagtagcacaccagccaaag ggacctcagctccttgggtgaatggtgaggagaggtgacacagacttcca gccatcttccctcatgctgggtttcccagacctccacactgtctagggga ctaacaggaggggggacactgcaaaggggagggtgacaggatgtgagggg cagatgttcaaagaacattataagcttgtcttgaaatgttattatgtaat tcagtacaataaaaattaaaaataaaaacttgtgaaaaggcaaaaatccc ctgcagataggaaagggttggttgttcacaataaaacaagacttctaaag tctggcaatattagcagaaacacttgcactgttataggcactgggacagg gtctcactatgtagccctagatgacctggaattcactgtgtagaccaggc tggaactcagagatctgcccgcctccacctccgcctacgcctcctcctcc gcctcccggtgccaggattaaaggcatgtgccaccttttttatttatatt cttatccctacatctgactcttgctctttagctcctcccagtgcttggta tgatcagccttagtcctggtcattctctagctgtgaacttttcaaagtct gagaaatgacagttgtcagcacaattttttttccaaagaaacaaaacaaa aaatggttgtataaatgagctctgctcttaaggacttaggtgtcctgtag ccttacaagatcatggctctgtatgacaggggagattggtttataagact acaggaggcaatggtctgtttgaccacaggggagatggatgggcacgggc agcttcagaatgagtaagaggcacaaaacggcagcatcccagggcttcct acacacctcagctcctgcacaaggtttctatgtgaaagcaaaggaagtga gggcagacactgtcaggaggagacagtccagaagcagaaccatagcatga gtagagaaccatgccctgggtccatggcagtgctgaagttcctgggttcc caccagcctcgaattgtgcctagagagaatgt
quality values	Open. Hide. 61 47 24 38 61 55 61 49 61 61 35 24 61 61 61 37 37 61 61 61 61 61 61 61 59 59 59 59 32 17 45 16 18 28 35 36 52 41 59 61 61 59 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 55 55 61 61 59 61 59 61 61 61 61 61 61 55 61 59 59 49 44 30 44 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 44 55 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 57 57 57 57 57 34 57 57 53 57 57 57 57 53 47 57 53 53 57 57 57 57 47 45 57 57 52 57 53 57 57 57 57 57 57 57 57 53 57 53 57 57 53 53 57 57 47 47 57 57 57 52 53 51 52 57 57 57 57 57 57 53 50 47 47 47 52 57 52 45 53 52 57 43 37 57 57 52 53 53 52 53 45 53 38 57 57 57 57 38 32 57 57 53 53 57 57 57 37 37 53 52 57 45 52 57 30 53 57 45 57 47 47 53 52 57 38 37 57 50 50 53 53 57 52 38 50 53 53 43 47 50 53 52 52 53 38 43 50 57 47 53 37 44 38 36 47 57 53 57 31 38 39 47 52 57 57 46 38 53 57 53 50 52 53 41 57 57 39 33 43 38 37 47 52 34 45 53 36 57 53 48 57 57 47 44 48 42 30 53 40 52 18 57 40 39 43 37 33 52 57 40 45 32 29 43 25 53 41 41 20 45 57 39 33 45 57 34 37 41 37 32 57 53 41 57 35 30 23 44 44 30 32 57 47 33 51 30 39 34 29 41 32 35 32 30 30 28 31 23 51 47 37 26 48 46 30 41 30 51 51 32 30 30 30 32 39 32 45 43 29 47 29 38 29 24 48 37 36 16 45 34 31 25 30 25 29 31 39 29 29 36 29 51 38 25 29 24 30 29 43 29 30 29 29 33 27 29 36 29 30 20 28 29 43 29 21 23 20 29 29 28 35 29 25 24 32 26 41 46 35 20 25 39 10 15 38 33 51 30 29 35 32 18 29 22 28 29 29 20 17 38 33 19 27 15 18 51 20 39 51 30 21 27 23 29 35 33 51 29 18 29 41 25 28 29 23 23 28 38 23 28 29 18 25 7 7 19 17 28 29 16 36 13 11 25 20 29 25 34 51 51 51 24 28 30 30 31 22 19 18 22 27 32 34 13 13 39 51 25 25 23 18 27 33 24 14 17 29 27 26 38 20 20 38 18 17 26 33 10 28 15 21 39 35 21 10 25 23 25 42 42 21 17 4 22 12 11 30 34 21 20 7 17 19 30 13 15 35 15 23 16 26 11 29 22 10 22 20 8 34 21 11 22 7 13 13 25 19 17 12 22 29 14 17 15 15 9 6 4 5 21 20 27 34 18 9 4 5 5 14 4 7 14 19 13 18 28 26 22 23 20 16 27 4 10 5 12 10 5 13 24 35 23 14 19 16 16 11 22 20 13 9 8 5 25 6 12 7 6 4 12 14 10 5 17 5 12 20 10 17 18 5 25 12 10 15 13 24 12 8 17 11 4 3 1 6 4 10 3 6 10 5 4 7 5 8 10 27 24 18 11 16 17 14 7 16 17 13 3 6 18 7 4 2 1 6 1 1 3 2 2 2 5 5 3 4 4 8 7 3 5 3 1 4 1 4 20 9 5 4 13 9 12 4 9 9 4 4 6 12 9 10 4 14 4 7 16 29 20 8 8 4 4 6 9 1 11 13 11 9 10 6 7 5 5 7 18 4 4 5 9 6 4 2 4 18 4 8 3 2 2 2	Open. Hide. 55 59 61 59 61 59 49 26 28 29 21 23 32 26 27 24 55 59 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 55 61 61 61 61 59 59 44 28 30 28 30 52 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 55 59 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 35 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 55 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 55 61 55 55 55 55 61 61 61 61 47 61 61 61 61 61 53 39 61 61 53 61 61 61 53 61 61 61 52 61 61 61 61 53 61 61 61 61 61 61 47 47 61 61 61 50 61 53 61 47 61 61 61 50 50 61 61 61 61 61 61 61 53 61 61 61 61 61 50 53 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 53 61 34 38 47 28 27 47 52 61 61 53 53 38 53 47 53 53 53 53 47 38 47 57 53 57 57 57 57 57 45 39 57 57 53 53 45 53 57 47 52 57 57 57 57 57 57 57 53 53 45 53 57 57 53 57 45 53 57 50 57 53 47 53 53 53 57 53 53 30 53 53 53 57 47 52 57 47 38 53 53 53 42 47 57 53 43 34 50 39 43 41 41 52 38 33 38 53 47 52 52 42 40 43 35 47 53 53 33 53 38 57 38 53 53 52 26 47 45 46 52 38 32 45 52 41 36 34 41 57 35 42 29 57 53 45 50 50 53 42 53 24 53 57 33 45 52 50 47 36 36 38 57 37 40 53 44 30 46 35 50 31 38 53 57 57 57 57 57 57 39 38 47 42 57 53 35 52 53 38 38 30 30 30 24 24 24 26 57 57 53 40 31 42 34 19 53 53 33 36 26 37 57 33 40 36 42 21 44 44 39 35 37 36 44 53 40 37 26 30 24 33 31 23 30 23 28 6 26 24 41 20 33 47 29 40 23 40 25 37 41 33 16 18 30 13 46 27 24 18 24 28 25 30 44 27 44 32 33 30 29 31 34 21 31 22 24 13 46 45 17 48 25 12 7 6 17 36 24 46 36 29 29 29 36 10 44 20 39 28 25 13 17 12 25 20 22 10 22 22 29 29 31 28 35 34 11 8 5 8 10 23 31 14 10 21 5 12 31 29 29 43 15 29 23 7 23 7 10 29 41 15 15 15 20 24 31 23 20 19 29 23 31 33 35 11 7 7 15 4 22 23 15 11 13 21 12 33 15 33 9 25 11 26 30 51 21 17 29 29 15 14 22 29 20 41 31 29 18 20 18 31 23 24 38 7 9 11 5 44 8 12 19 27 15 28 24 22 30 19 31 24 22 33 18 15 13 13 12 11 10 8 13 28 33 6 29 16 19 15 12 14 6 5 16 13 19 19 21 32 14 8 9 16 13 8 9 10 8 25 29 25 9 23 12 32 7 12 25 25 19 14 29 10 6 5 6 6 6 22 13 14 6 6 24 10 30 20 11 5 18 13 10 5 7 6 12 8 6 30 6 6 7 14 29 7 17 4 3 4 4 5 4 17 4 5 10 10 7 4 6 10 11 30 24 6 21 32 15 4 11 15 10 21 9 25 6 3 2 5 14 9 23 7 7 5 7 2 3 6 6 6 5 14 7 13 4 11 21 12 9 8 12 6 3 6 7 8 5 7 9 10 6 5 9 1 11 4 5 7 4 4 4 6 7 4 10 18 5 10 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_179616720_179617870
seq2: B6Ng01-162J17.g_69_1200

seq1  GAATTCACTGCTTGTCTCCCTGGTACATGAGGTGAACTTAGGGTGCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTTGTCTCCCTGGTACATGAGGTGAACTTAGGGTGCCTCT  50

seq1  GACAGCAAGATCAATAGCTTTACACAGAGAGAGTAGCACACCAGCCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAGATCAATAGCTTTACACAGAGAGAGTAGCACACCAGCCAAAG  100

seq1  GGACCTCAGCTCCTTGGGTGAATGGTGAGGAGAGGTGACACAGACTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCAGCTCCTTGGGTGAATGGTGAGGAGAGGTGACACAGACTTCCA  150

seq1  GCCATCTTCCCTCATGCTGGGTTTCCCAGACCTCCACACTGTCTAGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTTCCCTCATGCTGGGTTTCCCAGACCTCCACACTGTCTAGGGGA  200

seq1  CTAACAGGAGGGGGGACACTGCAAAGGGGAGGGTGACAGGATGTGAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGGAGGGGGGACACTGCAAAGGGGAGGGTGACAGGATGTGAGGGG  250

seq1  CAGATGTTCAAAGAACATTATAAGCTTGTCTTGAAATGTTATTATGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTTCAAAGAACATTATAAGCTTGTCTTGAAATGTTATTATGTAAT  300

seq1  TCAGTACAATAAAAATTAAAAATAAAAACTTGTGAAAAGGCAAAAATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACAATAAAAATTAAAAATAAAAACTTGTGAAAAGGCAAAAATCCC  350

seq1  CTGCAGATAGGAAAGGGTTGGTTGTTCACAATAAAACAAGACTTCTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATAGGAAAGGGTTGGTTGTTCACAATAAAACAAGACTTCTAAAG  400

seq1  TCTGGCAATATTAGCAGAAACACTTGCACTGTTATAGGCACTGGGACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAATATTAGCAGAAACACTTGCACTGTTATAGGCACTGGGACAGG  450

seq1  GTCTCACTATGTAGCCCTAGATGACCTGGAATTCACTGTGTAGACCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTATGTAGCCCTAGATGACCTGGAATTCACTGTGTAGACCAGGC  500

seq1  TGGAACTCAGAGATCTGCCCGCCTCCACCTCCGCCTACGCCTCCTCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCAGAGATCTGCCCGCCTCCACCTCCGCCTACGCCTCCTCCTCC  550

seq1  GCCTCCCGGTGCCAGGATTAAAGGCATGTGCCACCTTTTTTATTTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCGGTGCCAGGATTAAAGGCATGTGCCACCTTTTTTATTTATATT  600

seq1  CTTATCCCTACATCTGACTCTTGCTCTTTAGCTCCTCCCAGTGCTTGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCCTACATCTGACTCTTGCTCTTTAGCTCCTCCCAGTGCTTGGTA  650

seq1  TGATCAGCCTTAGTCCTGGTCATTCTCTAGCTGTGAACTTTTCAAAGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGCCTTAGTCCTGGTCATTCTCTAGCTGTGAACTTTTCAAAGTCT  700

seq1  GAGAAATGACAGTTGTCAGCACAATTTTTTTTCCAAAGAAACAAAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGACAGTTGTCAGCACAATTTTTTTTCCAAAGAAACAAAACAAA  750

seq1  AAATGGTTGTATAAATGAGCTCTGCTCTTAAGGACTTAGGTGTCCTGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTGTATAAATGAGCTCTGCTCTTAAGGACTTAGGTGTCCTGTAG  800

seq1  CCTTACAAGATCATGGCTCTGTATGACAGGGGAGATTGGTTTATAAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAAGATCATGGCTCTGTATGACAGGGGAGATTGGTTTATAAGACT  850

seq1  ACAGGAGGCAATGGTCTGTATGACCACAGGGGAGATTGGATGGGCACGGG  900
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  ACAGGAGGCAATGGTCTGTTTGACCACAGGGGAGA-TGGATGGGCACGGG  899

seq1  CAGCTTCAGAAGGAGTAAGAGGCACAAAACGGCAGCATCCCAGGGCTTCC  950
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  CAGCTTCAGAATGAGTAAGAGGCACAAAACGGCAGCATCCCAGGGCTT-C  948

seq1  CAACACACCTCAGCTCCCTGCACAAGGTTTCCTATGTGGAAAGCAAAGGA  1000
      | ||||||||||||| |||||||||||||| |||||| ||||||||||||
seq2  CTACACACCTCAGCT-CCTGCACAAGGTTT-CTATGT-GAAAGCAAAGGA  995

seq1  AGTGAGGGGCAGACACTGTCCAGGAAGGAGACAGCCCAGAAGGCAGACCC  1050
      ||||| ||||||||||||| |||| ||||||||| |||||| ||||| ||
seq2  AGTGA-GGGCAGACACTGT-CAGG-AGGAGACAGTCCAGAA-GCAGAACC  1041

seq1  ATAGCATTGGAAGTCAAGAGACCCATGCCCTGGGTCCATTGGCAGTGGCT  1100
      |||||||    |||  ||||| |||||||||||||||| ||||||||   
seq2  ATAGCAT---GAGT--AGAGAACCATGCCCTGGGTCCA-TGGCAGTG--C  1083

seq1  TGAGGCTCCTTGGTTCCCACCAGCCTCTGAATTGGGGGCTAGAGAGAATG  1150
      ||| | |||| |||||||||||||||| ||||| | | ||||||||||||
seq2  TGAAGTTCCTGGGTTCCCACCAGCCTC-GAATT-GTGCCTAGAGAGAATG  1131

seq1  T  1151
      |
seq2  T  1132

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information