BAC Information

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BAC

Clone NameB6Ng01-162K09
Chromosome1 (Build37)
Map Location 112,322,167 - 112,322,791
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7
Downstream geneLOC100041429, EG626652, Cdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162K09.bB6Ng01-162K09.g
ACCDH955435DH955436
length1,129997
definitionDH955435|Mus musculus domesticus DNA, BAC clone: B6Ng01-162K09, 5' end.DH955436|Mus musculus domesticus DNA, BAC clone: B6Ng01-162K09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccagttttaatagggttatttggttc
tttggagcctaacttcttgagatctttgtatatattggatattaaccctc
tattggatgtagggttggcaaagatctgttctcagcctgttggttgctgt
tttgtcctattgacagtgccctttgccttacagaagctttgtaattttat
gaggtcccatttgtcaattcttgatcttggagcataagctattggtgttc
agttaaggaaattttcctctgtgcccatgtgtttaaggctctttatgaaa
ttcttaggcaaatggatagagctagaaaatatcatcctgagtgaggtaac
tcaatcacaaaagaaaacacatggtatacactcactgataagtggatatt
agcccagtagagtgcaataaccaacatacaattaccaggccaaatgaagc
taatgaagaaggtagaccaaagtatgtatactttggtacttcttagaagg
ggagggggcacaatacccatgggaggagatacagagacaaactgtggaac
agagattgaaggaaagacaatccagagagtgccccacctctggattcatc
ccacgtatagtcaccaaacccagacactattgtggattccaacaagtgct
tgcttataggagcctgatatagctatctcctgagatgctctaccagtgcc
tgataaatacagaggtggatgctctcaggcaaacattggactgaacacaa
tatccccaatggagaagctagagaaaggacccaaggagctgaaagagctt
gcagcctcatagaaagaacaacaatatgaaccagagtttccaggaactaa
attgccaacgagagtacacatagagggatccttggctccagctgcatatg
tagcagaggacggcctttttgaacaaactggaatccccagagcttccaag
gactaaaccaccaaccaaaggatacacattgtgggtatcatggcaccagc
tgcaaatgtagcagaaggatgacctagtcagtcatcaatgggtggtggag
gtccttgattctgtgagcacttatgccagttaaggaatgccagccgaagc
ttgattggtggtttgttgataaggggatg
gaattcacatgtggcatgattatctaggaaaagaacctgtgtttagataa
agggtgataattttctgccctttaggagttgttaatacttcatggaatta
tcagaaaaatagtagtaggttcctctggaagacctatggtctctgcttcc
agctgtctttgattgataataaagaatagccatacagccaatcactgggc
agggagacttttagactgcaagggcaagggacagagggggaagaagaaca
gatagaatcacgatgatggggaaccagaaagatcagagtaaacagtccat
acacatgtaagaatcagaataaggggccacagaatccactcccctgactg
tgtctgggtcatcagagataaattatagaattagcaaatattaattagga
atacctgagggaagtatgtgctatccatggggagatcgagaagtgctgag
ccattgagctagttaggcatattacaagtaggtttcatcccagggataaa
gggatggttcaatatacggaaatccatcaatgtaatccagtatataaaca
aactcaaagacaaaaaccacatgatcatctccttagatgaagagaaagca
tttgacaaaatccaacacccattcatgataaaagtcttggaaagatcagg
aattcaaggcccatacctaaacataataaaagcaatatacatcaaaccag
tagccaatatcaaactaaatggaaagaagctggaagcaatccaaataaaa
tcatggactagacaagactgcccactttctccctacctattcaatatgat
actcaaaatcctatccagagcaattagacaacaaaaggagatcaaggcaa
tacaaattggaaaggaagaagtcaaattatcactatttgcagataataag
atagtatatataagtgatgctaaaaattccaccagagtactcctaaatct
gataacagcttcagtgaagtacctggatataaagtaattcaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112322167_112322791
seq2: B6Ng01-162K09.g_69_693

seq1  GAATTCACATGTGGCATGATTATCTAGGAAAAGAACCTGTGTTTAGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGTGGCATGATTATCTAGGAAAAGAACCTGTGTTTAGATAA  50

seq1  AGGGTGATAATTTTCTGCCCTTTAGGAGTTGTTAATACTTCATGGAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGATAATTTTCTGCCCTTTAGGAGTTGTTAATACTTCATGGAATTA  100

seq1  TCAGAAAAATAGTAGTAGGTTCCTCTGGAAGACCTATGGTCTCTGCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAATAGTAGTAGGTTCCTCTGGAAGACCTATGGTCTCTGCTTCC  150

seq1  AGCTGTCTTTGATTGATAATAAAGAATAGCCATACAGCCAATCACTGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTTTGATTGATAATAAAGAATAGCCATACAGCCAATCACTGGGC  200

seq1  AGGGAGACTTTTAGACTGCAAGGGCAAGGGACAGAGGGGGAAGAAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACTTTTAGACTGCAAGGGCAAGGGACAGAGGGGGAAGAAGAACA  250

seq1  GATAGAATCACGATGATGGGGAACCAGAAAGATCAGAGTAAACAGTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATCACGATGATGGGGAACCAGAAAGATCAGAGTAAACAGTCCAT  300

seq1  ACACATGTAAGAATCAGAATAAGGGGCCACAGAATCCACTCCCCTGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTAAGAATCAGAATAAGGGGCCACAGAATCCACTCCCCTGACTG  350

seq1  TGTCTGGGTCATCAGAGATAAATTATAGAATTAGCAAATATTAATTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGGTCATCAGAGATAAATTATAGAATTAGCAAATATTAATTAGGA  400

seq1  ATACCTGAGGGAAGTATGTGCTATCCATGGGGAGATCGAGAAGTGCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGAGGGAAGTATGTGCTATCCATGGGGAGATCGAGAAGTGCTGAG  450

seq1  CCATTGAGCTAGTTAGGCATATTACAAGTAGGTTTCATCCCAGGGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAGCTAGTTAGGCATATTACAAGTAGGTTTCATCCCAGGGATAAA  500

seq1  GGGATGGTTCAATATACGGAAATCCATCAATGTAATCCAGTATATAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGTTCAATATACGGAAATCCATCAATGTAATCCAGTATATAAACA  550

seq1  AACTCAAAGACAAAAACCACATGATCATCTCCTTAGATGAAGAGAAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAGACAAAAACCACATGATCATCTCCTTAGATGAAGAGAAAGCA  600

seq1  TTTGACAAAATCCAACACCCATTCA  625
      |||||||||||||||||||||||||
seq2  TTTGACAAAATCCAACACCCATTCA  625