BAC Information

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BAC

Clone NameB6Ng01-162N24
Chromosome6 (Build37)1 (Build37)
Map Location 26,301,951 - 26,302,694102,324,946 - 102,324,976
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGpr37, Pot1a, EG626912, LOC100041210
Downstream geneLOC100041247, Grm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162N24.bB6Ng01-162N24.g
ACCDH955602DH955603
length1,011543
definitionDH955602|Mus musculus domesticus DNA, BAC clone: B6Ng01-162N24, 5' end.DH955603|Mus musculus domesticus DNA, BAC clone: B6Ng01-162N24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(26,301,951 - 26,302,694)(102,324,946 - 102,324,976)
sequence
gaattcagtgttcattgaaaatagctacaataaaagatgtcagacaaaga
gtatatgttctagaaaggatgaccaaatatgtcatgaaaattataatttc
tgaaggaagtcattatttgattccataatgactaagtgagagaactttta
catatcaaaacacaaaactgcaggaagaaagaataattgttaagcaaatt
ttggaatactataattttagtttgtggactaggctgcatgtcagtttgca
tttgtttgaagcagaaaatttaaatcacctttgttcatataactgcttca
gaactcacccaacctctcagataagttgaattattaaaaatgagtacaga
tgcaggtagtacttatttctttgtattcatgttcattttttgaaagtgac
aaattaatattctaattcactttgccttcagtgaaaacaaaacaccgtgg
aagaaaattaagaggcctattgcaatttgccagggaaaccactgactgct
cattatttttgccttcttttttttaaaggaaaataaggtttaagggatat
acccatgagtggtatggccggatcataacgaaggtctattgtaatgattg
aaaaagctttggattgctcttcacgaagctgcacttgtcttatattctca
gcaactatcacatagttcctgtgataggaactctttccccacatccaaga
cagcattttttttgccatttatattcttgtttatgttcactctcactgga
atataaggaaatttttaaatagtttgcattcaccttccccttttagctaa
agatgctaagcatatgcttaggcgtttttgatgcattacatttcttcttt
tgagaactctcttcaatttcataactcattttaattgcattgttcattct
taatatatttattattttgagttagctgtatatacaaacattaatccact
ataatgtgcatagtcagatttctgtgtcttactatagagatacctgaaag
tctgtacttat
tgatgctctagtgaagtgatggtaggagagtatttttgaggtctatgacc
tcactggtcctgtagtctgggtaggatttgaatacaagacacagtttttt
ctttctgcatggaccttaagtctaattaaatagccattgattaactttaa
caattgactgtcatttcctgtatatttgttcacatcttggtatactgggt
attacggtggttcataaatgttgcagtgtggacagtattttctaaaatca
tgagagcttgactgcagaatagaggttcagttcagtcaagcatgaactgc
ttgagtccccagttctaacttcatagtgtcttcagcattaggccctgact
cccagagaggcaaccaaaatctctatcaataatctatattgttcacacaa
actactgtgaccaagcattcaaggggaagtttctcatgatgcatattggg
ttgttggtaagtttattgttcttccaataagtattaaagtattaccagct
caagtggctcgatcttgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26301951_26302694
seq2: B6Ng01-162N24.b_46_789 (reverse)

seq1  GAGAGTGAACATAAACAAGAATATAAATGGCAAAAAAAATGCTGTCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGAACATAAACAAGAATATAAATGGCAAAAAAAATGCTGTCTTGG  50

seq1  ATGTGGGGAAAGAGTTCCTATCACAGGAACTATGTGATAGTTGCTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGGAAAGAGTTCCTATCACAGGAACTATGTGATAGTTGCTGAGAA  100

seq1  TATAAGACAAGTGCAGCTTCGTGAAGAGCAATCCAAAGCTTTTTCAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACAAGTGCAGCTTCGTGAAGAGCAATCCAAAGCTTTTTCAATCA  150

seq1  TTACAATAGACCTTCGTTATGATCCGGCCATACCACTCATGGGTATATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAGACCTTCGTTATGATCCGGCCATACCACTCATGGGTATATCC  200

seq1  CTTAAACCTTATTTTCCTTTAAAAAAAAGAAGGCAAAAATAATGAGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACCTTATTTTCCTTTAAAAAAAAGAAGGCAAAAATAATGAGCAGT  250

seq1  CAGTGGTTTCCCTGGCAAATTGCAATAGGCCTCTTAATTTTCTTCCACGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTTCCCTGGCAAATTGCAATAGGCCTCTTAATTTTCTTCCACGG  300

seq1  TGTTTTGTTTTCACTGAAGGCAAAGTGAATTAGAATATTAATTTGTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTCACTGAAGGCAAAGTGAATTAGAATATTAATTTGTCACT  350

seq1  TTCAAAAAATGAACATGAATACAAAGAAATAAGTACTACCTGCATCTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAATGAACATGAATACAAAGAAATAAGTACTACCTGCATCTGTA  400

seq1  CTCATTTTTAATAATTCAACTTATCTGAGAGGTTGGGTGAGTTCTGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTTAATAATTCAACTTATCTGAGAGGTTGGGTGAGTTCTGAAGC  450

seq1  AGTTATATGAACAAAGGTGATTTAAATTTTCTGCTTCAAACAAATGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATGAACAAAGGTGATTTAAATTTTCTGCTTCAAACAAATGCAAA  500

seq1  CTGACATGCAGCCTAGTCCACAAACTAAAATTATAGTATTCCAAAATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATGCAGCCTAGTCCACAAACTAAAATTATAGTATTCCAAAATTTG  550

seq1  CTTAACAATTATTCTTTCTTCCTGCAGTTTTGTGTTTTGATATGTAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAATTATTCTTTCTTCCTGCAGTTTTGTGTTTTGATATGTAAAAG  600

seq1  TTCTCTCACTTAGTCATTATGGAATCAAATAATGACTTCCTTCAGAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCACTTAGTCATTATGGAATCAAATAATGACTTCCTTCAGAAATT  650

seq1  ATAATTTTCATGACATATTTGGTCATCCTTTCTAGAACATATACTCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCATGACATATTTGGTCATCCTTTCTAGAACATATACTCTTTG  700

seq1  TCTGACATCTTTTATTGTAGCTATTTTCAATGAACACTGAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACATCTTTTATTGTAGCTATTTTCAATGAACACTGAATTC  744

seq1: chr1_102324946_102324976
seq2: B6Ng01-162N24.g_584_614 (reverse)

seq1  CACACACACACACACACACACACACACAAGA  31
      |||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAAGA  31