BAC Information

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BAC

Clone NameB6Ng01-163B03
Chromosome1 (Build37)
Map Location 148,662,018 - 148,737,876
singlet/doubletdoublet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163B03.bB6Ng01-163B03.g
ACCDH955749DH955750
length1,1081,164
definitionDH955749|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B03, 5' end.DH955750|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,662,018 - 148,663,129)(148,736,701 - 148,737,876)
sequence
gaattctctaacattcactcagtactttgtaaagaaactatgcatatttg
agattattaatcaagccatatctgatagtagtaattgacatatccactag
gttcaaaactgtgctatcagtttgagataggcaaatggactcagatgaca
actaagtaatacaatttccatgtttatcattgtatctatttatatgggtt
ttccaatgagttctaacaattcaatactatactctgcccattttctcctt
agaagatactttgtaaggttgtttctgatacctgtttgtatttcagcaca
ttttctttccttagaggaccaaaaagggctttaattgagttcaactgaaa
aagaatacatcaaaagacagtgcataaaatataaaatcaccaaggaaagg
agaaaatcactttcttccatgacatagccaaaaaagagtaaattattttc
tatgaaacgtatttagtgtggccatcattgttaaaaagctatcaacagac
tgcaaaaagtagtattactatcactggtattttcatgatgccctgagaga
taatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatggatgaattcaattcaatcctataacttaaaaaaacct
accaactctgtaatttcaaggacattgtgcaggtgaagatgtaacagttc
tgcttacgtacttgcttaggctttgaagagacataagcaggataggtatt
cttattcagataaatgtattgaaatattatattttaatataagtatatat
gactcctttcagagaagtgtaaaacaatcagacaaaaatataattttatt
ttagatagctactaaatacttaagatctgctttgggtttaaatttttttt
tttttttttaggatgagtatactaatttaatggtgaaaaaaatcacaact
ttgatctctaaaacttttgtatgaagacaattataagctttaaaagtaag
aattcaattcaatttagcttagatttgagtactacctaagtcagtaactc
cctccctcccccttctaacagccctcccctcccctttctgaacagccaat
aactgaga
gaattcctggaacaataataatcatgtataactggatttttttataaaat
ataaaaattttatataattggcctaggtatatgggtaaatcaatctgtct
ctaataagacctttgtttatcactattaatatttttgtaatctaaacaaa
cctcttaatagatgaatgcaatattctgcactgaatgagagtgtcgatcc
atagtagaacactttgcttatcatgtggtattgactgcattggagctaga
acactttaaaaatagtctctgaaatgtaaattataaatgcaacttcaaat
aaaactataataattataatcacaatcaaaaatataatgtaagaaaacat
cttactagaaatatagggttaatatgacattttaccaacaagaaaattat
actgatatatagacaaagtccaaatataatttaaaataacaaacacaatg
aaattgaatgggaaccagaaacagaacctacaacgttctgtttgattaaa
gttacatgtgaaaaaatggaataatctattcttgtgcttgtttgatatat
tttcctggatatgtatatatattcttttgagaggtaaggaggatataacc
taaattatagtagaaataaatataatttttctatttacccaaaaatgcca
tccgagaatttcttagtgcaatgaaaatttcacatttaggtttccaatat
gtatatagtagaagaagaattctaaataggccaaagcacatggtacaggc
ctataatcacagctacccatagattgatgatggagtactgaagttgtgtg
agttcaagtccactttaggcacttagtttgactttgaatgcagataattg
aggaatttggggatacagggcagttgtagagtacttcacaaatacacact
aatctccatgattaatataaagaactagaaatgtagatactatgtttatg
tatctgagttacagagatatatataaaccctcttccattctcatttccta
cagacacggaaatttagagttacaaatgaaaatggtcatgtcaaatgcta
aatgctaccacctttttgtgggggtattattgcttagaattcttgagctg
ggtgttgtgttgcttgcctttaatccaagacacttgaggcagaagatcaa
ttcctgtgtgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148662018_148663129
seq2: B6Ng01-163B03.b_43_1150

seq1  GAATTCTCTAACATTCACTCAGTACTTTGTAAAGAAACTATGCATATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACATTCACTCAGTACTTTGTAAAGAAACTATGCATATTTG  50

seq1  AGATTATTAATCAAGCCATATCTGATAGTAGTAATTGACATATCCACTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTAATCAAGCCATATCTGATAGTAGTAATTGACATATCCACTAG  100

seq1  GTTCAAAACTGTGCTATCAGTTTGAGATAGGCAAATGGACTCAGATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAACTGTGCTATCAGTTTGAGATAGGCAAATGGACTCAGATGACA  150

seq1  ACTAAGTAATACAATTTCCATGTTTATCATTGTATCTATTTATATGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTAATACAATTTCCATGTTTATCATTGTATCTATTTATATGGGTT  200

seq1  TTCCAATGAGTTCTAACAATTCAATACTATACTCTGCCCATTTTCTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGAGTTCTAACAATTCAATACTATACTCTGCCCATTTTCTCCTT  250

seq1  AGAAGATACTTTGTAAGGTTGTTTCTGATACCTGTTTGTATTTCAGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATACTTTGTAAGGTTGTTTCTGATACCTGTTTGTATTTCAGCACA  300

seq1  TTTTCTTTCCTTAGAGGACCAAAAAGGGCTTTAATTGAGTTCAACTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCTTAGAGGACCAAAAAGGGCTTTAATTGAGTTCAACTGAAA  350

seq1  AAGAATACATCAAAAGACAGTGCATAAAATATAAAATCACCAAGGAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATACATCAAAAGACAGTGCATAAAATATAAAATCACCAAGGAAAGG  400

seq1  AGAAAATCACTTTCTTCCATGACATAGCCAAAAAAGAGTAAATTATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCACTTTCTTCCATGACATAGCCAAAAAAGAGTAAATTATTTTC  450

seq1  TATGAAACGTATTTAGTGTGGCCATCATTGTTAAAAAGCTATCAACAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAACGTATTTAGTGTGGCCATCATTGTTAAAAAGCTATCAACAGAC  500

seq1  TGCAAAAAGTAGTATTACTATCACTGGTATTTTCATGATGCCCTGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAGTAGTATTACTATCACTGGTATTTTCATGATGCCCTGAGAGA  550

seq1  TAATATATATATATATATATATATATATATATATATATATATATATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATATATATATATATATATATATATATATATATATATATATATAT  600

seq1  ATATATATATATGGATGAATTCAATTCAATCCTATAACTTAAAAAAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATGGATGAATTCAATTCAATCCTATAACTTAAAAAAACCT  650

seq1  ACCAACTCTGTAATTTCAAGGACATTGTGCAGGTGAAGATGTAACAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTCTGTAATTTCAAGGACATTGTGCAGGTGAAGATGTAACAGTTC  700

seq1  TGCTTACGTACTTGCTTAGGCTTTGAAGAGACATAAGCAGGATAGGTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACGTACTTGCTTAGGCTTTGAAGAGACATAAGCAGGATAGGTATT  750

seq1  CTTATTCAGATAAATGTATTGAAATATTATATTTTAATATAAGTATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCAGATAAATGTATTGAAATATTATATTTTAATATAAGTATATAT  800

seq1  GACTCCTTTCAGAGAAGTGTAAAACAATCAGACAAAAATATAA-TTTATT  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACTCCTTTCAGAGAAGTGTAAAACAATCAGACAAAAATATAATTTTATT  850

seq1  TTAGATAGCTACTAAATACTTAAGATCTGCTTTGGGTTTAAATTTTTTTT  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTAGATAGCTACTAAATACTTAAGATCTGCTTTGGGTTTAAA-TTTTTTT  899

seq1  TTTTTTTTTTAGGATGAGTATACTAATTTAATGGTGAAAAAAATCACAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAGGATGAGTATACTAATTTAATGGTGAAAAAAATCACAAC  949

seq1  TTTGATCTCTAAAAACTTTGTATGAAGACAATAATAAGCTTTAAAAGTAA  999
      ||||||||||||||  |||||||||||||||| |||||||||||||||||
seq2  TTTGATCTCTAAAACTTTTGTATGAAGACAATTATAAGCTTTAAAAGTAA  999

seq1  GAAATTCAATTCAAATTAGGCTTAGATTTGAGTACTACCTAAGTCAGTAA  1049
      | |||||||||||| ||| ||||||||||||||||||||||||||||| |
seq2  G-AATTCAATTCAATTTA-GCTTAGATTTGAGTACTACCTAAGTCAGT-A  1046

seq1  ACTCCCTCCCCTCCCCCTTCTGACAGCCCTCCCCTCCCCCTTCTG-ACAG  1098
      ||||||| ||||||||||||| ||||||||||||||||| ||||| ||||
seq2  ACTCCCT-CCCTCCCCCTTCTAACAGCCCTCCCCTCCCCTTTCTGAACAG  1095

seq1  CGCAGTAACTGAGA  1112
      | || |||||||||
seq2  C-CAATAACTGAGA  1108

seq1: chr1_148736701_148737876
seq2: B6Ng01-163B03.g_68_1231 (reverse)

seq1  TCAACACACAGAAATCTGTCTGTCTCTGCCCTCAAAGTG-CTTGGATTAA  49
      ||||||||||| |||   |||   |||| |||| ||||| ||||||||||
seq2  TCAACACACAGGAATTGATCT---TCTG-CCTC-AAGTGTCTTGGATTAA  45

seq1  AGGCATGCAACACAACACCCAGCTTCAAAGAATTCTTAGGCAATAATA-C  98
      ||||| ||||||||||||||||||   |||||||| || ||||||||| |
seq2  AGGCAAGCAACACAACACCCAGCT--CAAGAATTC-TAAGCAATAATACC  92

seq1  ACCACAAAAAGGTGGTAGCAATTTAGCATTTGACATGAACCATTTTTCAT  148
       |||||||||||||||||| ||||||||||||||||| |||| |||||| 
seq2  CCCACAAAAAGGTGGTAGC-ATTTAGCATTTGACATG-ACCA-TTTTCA-  138

seq1  TTTGTAACTCTAAATTTCCGTGTCTGTAGGAAATGAGAATGGAAGAGGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACTCTAAATTTCCGTGTCTGTAGGAAATGAGAATGGAAGAGGGT  188

seq1  TTATATATTATCTCTTGTAACTCAGATACATAAACATAGTATCTACATTT  248
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  TTATATA-TATCTC-TGTAACTCAGATACATAAACATAGTATCTACATTT  236

seq1  CTAGTTCTTTATATTAATCATGGAGATTAGTGTGTATTTGTGAAGTACTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTTTATATTAATCATGGAGATTAGTGTGTATTTGTGAAGTACTC  286

seq1  TACAACTGCCCTGTATCCCCAAATTCCTCAATTATCTGCATTCAAAGTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTGCCCTGTATCCCCAAATTCCTCAATTATCTGCATTCAAAGTCA  336

seq1  AACTAAGTGCCTAAAGTGGACTTGAACTCACACAACTTCAGTACTCCATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTGCCTAAAGTGGACTTGAACTCACACAACTTCAGTACTCCATC  386

seq1  ATCAATCTATGGGTAGCTGTGATTATAGGCCTGTACCATGTGCTTTGGCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTATGGGTAGCTGTGATTATAGGCCTGTACCATGTGCTTTGGCC  436

seq1  TATTTAGAATTCTTCTTCTACTATATACATATTGGAAACCTAAATGTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGAATTCTTCTTCTACTATATACATATTGGAAACCTAAATGTGAA  486

seq1  ATTTTCATTGCACTAAGAAATTCTCGGATGGCATTTTTGGGTAAATAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATTGCACTAAGAAATTCTCGGATGGCATTTTTGGGTAAATAGAA  536

seq1  AAATTATATTTATTTCTACTATAATTTAGGTTATATCCTCCTTACCTCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATTTATTTCTACTATAATTTAGGTTATATCCTCCTTACCTCTC  586

seq1  AAAAGAATATATATACATATCCAGGAAAATATATCAAACAAGCACAAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATATATATACATATCCAGGAAAATATATCAAACAAGCACAAGAA  636

seq1  TAGATTATTCCATTTTTTCACATGTAACTTTAATCAAACAGAACGTTGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTATTCCATTTTTTCACATGTAACTTTAATCAAACAGAACGTTGTA  686

seq1  GGTTCTGTTTCTGGTTCCCATTCAATTTCATTGTGTTTGTTATTTTAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTTTCTGGTTCCCATTCAATTTCATTGTGTTTGTTATTTTAAAT  736

seq1  TATATTTGGACTTTGTCTATATATCAGTATAATTTTCTTGTTGGTAAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGGACTTTGTCTATATATCAGTATAATTTTCTTGTTGGTAAAAT  786

seq1  GTCATATTAACCCTATATTTCTAGTAAGATGTTTTCTTACATTATATTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATTAACCCTATATTTCTAGTAAGATGTTTTCTTACATTATATTTT  836

seq1  TGATTGTGATTATAATTATTATAGTTTTATTTGAAGTTGCATTTATAATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTGATTATAATTATTATAGTTTTATTTGAAGTTGCATTTATAATT  886

seq1  TACATTTCAGAGACTATTTTTAAAGTGTTCTAGCTCCAATGCAGTCAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCAGAGACTATTTTTAAAGTGTTCTAGCTCCAATGCAGTCAATA  936

seq1  CCACATGATAAGCAAAGTGTTCTACTATGGATCGACACTCTCATTCAGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGATAAGCAAAGTGTTCTACTATGGATCGACACTCTCATTCAGTG  986

seq1  CAGAATATTGCATTCATCTATTAAGAGGTTTGTTTAGATTACAAAAATAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATTGCATTCATCTATTAAGAGGTTTGTTTAGATTACAAAAATAT  1036

seq1  TAATAGTGATAAACAAAGGTCTTATTAGAGACAGATTGATTTACCCATAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTGATAAACAAAGGTCTTATTAGAGACAGATTGATTTACCCATAT  1086

seq1  ACCTAGGCCAATTATATAAAATTTTTATATTTTATAAAAAAATCCAGTTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGCCAATTATATAAAATTTTTATATTTTATAAAAAAATCCAGTTA  1136

seq1  TACATGATTATTATTGTTCCAGGAATTC  1176
      ||||||||||||||||||||||||||||
seq2  TACATGATTATTATTGTTCCAGGAATTC  1164