MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-163H02
Chromosome	1 (Build37)
Map Location	189,162,625 - 189,163,014
singlet/doublet	singlet
Overlap gene	Gpatch2
Upstream gene	Tgfb2, Rrp15, LOC666832, LOC100042375, D1Pas1, Spata17
Downstream gene	Esrrg, 9330162B11Rik, Ush2a
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-163H02.b	B6Ng01-163H02.g
ACC	DH956027	DH956028
length	1,133	358
definition	DH956027\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163H02, 5' end.	DH956028\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163H02, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctctggtagaatttttgaggtcccttatggaaattatcatatcaa ctgtgaatggcaatactttgacttcttccttttcaatttgtacccctttg atctagcttacttgttttaatgctccagctagaacttcaagaactgtatt gaagagatagagagcggagagccttgtcttgattttagtggaaatgcttt aagtttctctccatttaatttgatgttggctattggcttgatgtatattt cctttattgtgtttaggtatacatcccgtatccctgttatctctaagact tttatcatgaagaggtgtcggattttgtcaaatgttttttcagcatctag tgagatgatcatgtagtctttttttctttcagtttatttatatggtggat ttcattgattgattttcatatattgaaacactcctatatccctgtgatga tgcctacttgataatggtggatgatgtctttgatatgttcttggattcag tttgtgagtattttattgggtattttgcatcaatgttcataaaagaaatc aatctgaagttctctatccttttgagtctttgtgtggtttaatcatcagg gtgactgtggccttacagaatgattttggcagtgttccttctgtttctat tttatggaatagttagaggagtactggcattagcttttctttgaaagcct ggtagaattctacactcaaaccatcggactcagggttttgttttgttttt ttgattgggacacttttaatgactgcttctatttccttagggttatagaa ctattcagctagtttgcctgatcttgatttagccttgctgattgatatct tttttagaacattttagattttccagttttgtgtagtacaggcttttgaa gtaagatctaaagattctttgaatttctccttgtccgttgttatgccttc cttttcatttcaattttattaattggtgcactgtctctctgcctttttgt tagtttgctaagggtttgtctatctggttgatcttctcaaagaacagccc tgggtctttggatggttttagaaagttaatagtatactaatattatatta ctataatataataatatggatcctgtgattatc	attaacagggataaggcagctgttactgggattggggacgaaaagccagg caagcgcaagtggaagagccccggtttgcaagtgagcttgaagttggcct gcctggccagctgctcggcccgagaccttcactccgccttgctgtagaca ggggctgttacttgttccttctgttctttatacttgagagcctctccccc caccccataggagtgtcccaggggaattggagctcaatggcttaaagaga ctccaaaggtatacctttccattgaagaaagaaatcctacacggtgtgtg tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtg tgtgtgtg
quality values	Open. Hide. 57 42 25 24 61 61 61 61 61 50 37 53 47 37 50 43 37 55 55 55 61 43 61 55 43 35 25 41 49 19 25 11 15 18 28 41 49 55 55 59 59 59 59 61 61 61 59 59 59 59 61 59 59 59 55 59 61 59 61 61 61 61 61 61 61 61 61 61 59 59 37 59 50 36 43 49 49 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 59 52 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 61 61 59 61 43 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 59 61 61 61 61 59 59 61 59 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 52 61 61 61 61 61 61 61 55 61 61 55 55 55 55 61 55 55 61 61 55 61 55 61 61 61 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 50 61 61 61 61 61 53 61 61 61 61 61 61 50 53 53 50 50 50 53 53 50 53 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 37 50 61 61 61 61 61 61 61 61 61 61 53 61 53 53 53 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 53 61 47 61 61 50 61 53 61 52 53 53 52 53 53 53 47 47 53 53 57 47 47 57 57 52 52 53 38 53 53 47 45 53 45 42 53 57 52 57 53 38 57 53 53 53 53 45 52 50 53 57 50 53 47 47 52 52 53 53 47 38 57 47 52 50 53 50 57 57 53 52 53 57 53 47 47 47 57 28 45 37 50 53 53 47 57 57 42 50 50 52 50 53 41 50 21 53 53 45 45 53 52 53 57 50 50 45 47 47 45 53 53 43 33 37 43 45 52 38 37 45 24 52 52 52 32 39 41 40 50 40 52 52 43 33 52 43 52 52 28 50 37 45 45 36 23 52 50 32 52 57 52 30 53 53 40 38 15 46 46 37 32 17 53 53 53 53 46 30 37 38 27 57 53 46 39 50 35 25 52 50 46 38 22 28 40 44 37 40 37 33 48 31 52 30 47 29 25 13 46 23 21 40 29 53 44 39 57 40 12 31 36 31 37 21 34 33 26 34 37 32 41 40 25 24 37 30 33 36 33 33 21 26 31 36 30 44 48 34 29 9 33 37 39 24 57 33 33 22 41 29 21 37 40 30 20 30 30 11 30 30 34 23 30 32 30 11 45 45 45 51 48 30 23 43 28 29 23 25 45 46 30 48 17 11 7 46 51 17 18 29 29 29 37 46 46 23 23 12 31 30 33 29 35 26 29 27 15 21 26 29 46 44 26 34 31 28 27 32 25 33 11 28 17 27 35 33 46 34 18 39 17 27 29 23 36 31 28 39 27 32 33 22 15 13 26 26 14 25 25 17 29 33 29 23 21 43 12 20 13 24 23 14 13 7 14 30 19 24 32 41 30 16 17 27 29 19 21 7 25 16 41 39 21 38 17 21 30 5 32 12 17 10 8 13 21 20 35 14 30 7 17 14 19 17 29 27 23 18 9 17 17 27 29 20 29 15 16 15 9 21 36 9 34 13 19 28 9 13 38 28 21 38 20 35 17 28 17 14 6 7 32 9 16 28 14 14 9 6 10 13 28 10 8 9 22 38 17 11 19 20 11 4 5 13 5 4 11 17 44 14 8 4 6 32 7 6 7 10 16 11 19 16 8 35 24 7 4 14 25 6 5 28 15 6 6 20 16 5 12 26 11 5 3 7 9 7 4 4 9 5 29 21 12 11 5 4 4 3 4 4 7 26 13 18 7 4 9 6 10 17 7 6 3 13 12 13 5 4 11 25 4 8 10 8 2 2 4 4 2	Open. Hide. 16 11 10 13 12 8 6 8 12 28 19 37 52 59 59 59 59 61 59 61 61 59 59 59 59 61 61 61 61 59 59 59 61 61 61 61 61 59 49 59 61 52 52 52 37 39 35 22 24 24 26 39 59 61 61 59 61 59 59 61 61 61 61 61 61 59 61 59 61 61 61 61 59 61 59 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 59 61 61 59 61 61 61 61 61 59 61 61 61 61 52 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 59 55 59 59 61 59 59 59 52 59 43 44 50 44 59 59 52 59 45 59 37 43 13 27 22 32 12 36 18 31 23 36 12 32 10 26 6 17 12 18 13 10 8 13

Alignment Information

BAC End 1	BAC End 2
	seq1: chr1_189162625_189163014 seq2: B6Ng01-163H02.g_66_429 seq1 GAATTCATTAACAGGGATAAGGCAGCTGTTACTGGGATTGGGGACGAAAA 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAATTCATTAACAGGGATAAGGCAGCTGTTACTGGGATTGGGGACGAAAA 50 seq1 GCCAGGCAAGCGCAAGTGGAAGAGCCCCGGTTTGCAAGTGAGCTTGAAGT 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GCCAGGCAAGCGCAAGTGGAAGAGCCCCGGTTTGCAAGTGAGCTTGAAGT 100 seq1 TGGCCTGCCTGGCCAGCTGCTCGGCCCGAGACCTTCACTCCGCCTTGCTG 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGGCCTGCCTGGCCAGCTGCTCGGCCCGAGACCTTCACTCCGCCTTGCTG 150 seq1 TAGACAGGGGCTGTTACTTGTTCCTTCTGTTCTTTATACTTGAGAGCCTC 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TAGACAGGGGCTGTTACTTGTTCCTTCTGTTCTTTATACTTGAGAGCCTC 200 seq1 TCCCCCCACCCCATAGGAGTGTCCCAGGGGAATTGGAGCTCAATGGCTTA 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCCCCCCACCCCATAGGAGTGTCCCAGGGGAATTGGAGCTCAATGGCTTA 250 seq1 AAGAGACTCCAAAGGTATACCTTTCCATTGAAGAAAGAAATCCTACACGG 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGAGACTCCAAAGGTATACCTTTCCATTGAAGAAAGAAATCCTACACGG 300 seq1 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG 350 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\| seq2 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 350 seq1 T--GTGTGTGTGTGCGTCTGTGTGTGTGTGAGTGTGTGTGTG 390 \| \|\|\|\|\|\|\|\|\|\|\| seq2 TGAGTGTGTGTGTG---------------------------- 364

BAC End 1

BAC End 2

seq1: chr1_189162625_189163014
seq2: B6Ng01-163H02.g_66_429

seq1  GAATTCATTAACAGGGATAAGGCAGCTGTTACTGGGATTGGGGACGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAACAGGGATAAGGCAGCTGTTACTGGGATTGGGGACGAAAA  50

seq1  GCCAGGCAAGCGCAAGTGGAAGAGCCCCGGTTTGCAAGTGAGCTTGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCAAGCGCAAGTGGAAGAGCCCCGGTTTGCAAGTGAGCTTGAAGT  100

seq1  TGGCCTGCCTGGCCAGCTGCTCGGCCCGAGACCTTCACTCCGCCTTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGCCTGGCCAGCTGCTCGGCCCGAGACCTTCACTCCGCCTTGCTG  150

seq1  TAGACAGGGGCTGTTACTTGTTCCTTCTGTTCTTTATACTTGAGAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGGGCTGTTACTTGTTCCTTCTGTTCTTTATACTTGAGAGCCTC  200

seq1  TCCCCCCACCCCATAGGAGTGTCCCAGGGGAATTGGAGCTCAATGGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCACCCCATAGGAGTGTCCCAGGGGAATTGGAGCTCAATGGCTTA  250

seq1  AAGAGACTCCAAAGGTATACCTTTCCATTGAAGAAAGAAATCCTACACGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTCCAAAGGTATACCTTTCCATTGAAGAAAGAAATCCTACACGG  300

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  T--GTGTGTGTGTGCGTCTGTGTGTGTGTGAGTGTGTGTGTG  390
      |  |||||||||||                            
seq2  TGAGTGTGTGTGTG----------------------------  364

BAC Information

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BAC

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BAC End Information

Alignment Information