BAC Information

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BAC

Clone NameB6Ng01-164A07
Chromosome1 (Build37)
Map Location 37,918,184 - 38,077,121
singlet/doubletdoublet
Overlap geneTsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b
Upstream geneTmem131, EG241053, A230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik
Downstream geneRev1, EG329123, Aff3, Lonrf2, Chst10, EG625775, Nms, Pdcl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164A07.bB6Ng01-164A07.g
ACCDH956457DH956458
length1,1621,129
definitionDH956457|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A07, 5' end.DH956458|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,075,944 - 38,077,121)(37,918,184 - 37,919,326)
sequence
gaattcagatcatacccccagtgatcacataaaaagccagacatgggctg
gagagatggctcagcagttaggagcactgactgctctaaggccctgagtt
caaatcccagcaaccacatggtggctcacaaccatctgcaatggatctga
tgccctcttctggtgtgtctgaagaaagcaaaggtgaatacataaaataa
ataaatcttaaaaaataaaaagaaaagccagacgtgacagcactgtttcc
tgaccagccagtatactaactctatgttcagtgaaaccctgtctcaaaaa
aatcagatggaagacgatttcttatgctctatctcagcattccttggttg
cctgtggttctctacagagagctgaggcactggctttactgtatctatct
gttggtgtctctattcaactgctgttcagaaagccatttgggtgaggctt
tatacatacagtttctgacactccgggggactcaacctcacagcagttca
tgggaaaaaaacaaggccataaatttaaaagagaggtatacagaaagacc
gtagagaaatggtgtaatattaaaaacagatcatggaaagtgacagcgga
atcgacctccagcctcctctgcacacaaagagatggaccccccccccaca
cacacacacatgtgtatgaggactagtcacaagatagtatgaccacaact
tagaccaaacatgaaccagagccttctgtggccatgaccaaccttccaga
gctgcagcagtgtctcctttctcttccgaggcagctcctgtgtcatgagt
ccctctgagtgtcaacacctcctcctcaggtctcttctgaggctccctct
gtttactctgctccttcttgcccttctctagctcttctttctccttcatc
ttccgcaacttcgctttctcttcatctctctttttcttctcgcgctcttt
cttttctgccttcttctgggccaccgtcttaattttgaagaagagtcatc
gtcctcattcccactgtctacgtaggaacggacttgtttttctgattttt
tctgtccttttctggactgcaattcatcggacccaccaccaccttcacca
gaagagtaacctcggacgtcttactctttgctattgtcttcatctcttct
gaccgtccgttt
gaattctcagtttccagaactgttagggttaaatatctgttgcttacaat
ctaccaagcgtacagtgtgttgttatatcaatgcacatgagctaagacat
gttccattttcagtcgacttcatgccctccttccacttttccctaccagg
aacattctctcctcagcctcttacctgtctgaagtctgttcaacctcagt
actttgtcttttctccctcaatttcctttttaaagcaggttctctctcag
tcaccctccactcaagccagtgcacttgtccctacttgaaatcatattat
ctgtctgtttccctgtttgctgtctactttcttctactgggatataaagt
ccaagatgtctaggctgttgtctggttgctatgtttgaaaaaaagtctac
cagagtttctgtatagaacatttgtatttactcaatgagtaaatttttag
agttaataaaacatttttaaaataatgaagtttaattaaacaaagcagcc
tctgtggaggaatgaaagtaaacctgaagaggactaataaatgaattaaa
taataaatgattaataaaccatttaatgaatgattaaaatcaaaatataa
aatgtaagcttttaatcggcatagctgcaagagccaaagaggcagaataa
aagttaaggaagactaaggctgtagaaggttcactgccaaaagcagaaaa
gtatgcttccttctttccacgagaccccttccagaatcaagcatgggctt
cgtctctcaagaaatgcaaataaaagtctgcttagccttagtctgaaaac
tcaaaccttaaatctccacaattcaaaaatgttctgagtaacaaacagca
tgaagctacaaatggaaaattccatacttgaccttgcagaatggccatag
tcaaaacccagtagaccaaaagagttacagaaaattaccttcaggccatg
atataaagttcatatgaaacataaattttctgttagatttggtcccattc
ctgggaagctttatgtacatacaatatcctaaaggtcccaaactctgaaa
cagcacacttctgatcttagcattctgaaaaatgtatctccatgcatacc
aaagccaggaattggaacactactgatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_38075944_38077121
seq2: B6Ng01-164A07.b_49_1210 (reverse)

seq1  AAACGGGACGGGTCAGAAGAGGATGAAGACAATAGCAAAAGAAGTAAAGA  50
      |||| |||| |||||||||| ||||||||||||||||||   |||||   
seq2  AAAC-GGAC-GGTCAGAAGA-GATGAAGACAATAGCAAA--GAGTAA--G  43

seq1  ACGTTCGAGAGTAAACTCCTCTGGTGAAAGTGGTGGTGAGTCCGATGAAT  100
      |||| ||||  |  |||| ||||||||| ||||||||| |||||||||| 
seq2  ACGTCCGAGGTT--ACTCTTCTGGTGAAGGTGGTGGTGGGTCCGATGAA-  90

seq1  TTTTGCAGTCCAGAAAAGGACAGAAAAAAAATCAGAAGAACAAGTCCGTT  150
        |||||||||||||||||||||  |||||||||||| ||||||||||||
seq2  --TTGCAGTCCAGAAAAGGACAG--AAAAAATCAGAAAAACAAGTCCGTT  136

seq1  CCTACCGTAGACAGTGGGAATGAGGACGATGACTCTTCCTTCAAAATTAA  200
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTA-CGTAGACAGTGGGAATGAGGACGATGACTCTT-CTTCAAAATTAA  184

seq1  GACGGTGGCCCAGAAGAAGGCAGAAAAGAAAGAGCGCGAGAAGAAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTGGCCCAGAAGAAGGCAGAAAAGAAAGAGCGCGAGAAGAAAAAGA  234

seq1  GAGATGAAGAGAAAGCGAAGTTGCGGAAGATGAAGGAGAAAGAAGAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAAGAGAAAGCGAAGTTGCGGAAGATGAAGGAGAAAGAAGAGCTA  284

seq1  GAGAAGGGCAAGAAGGAGCAGAGTAAACAGAGGGAGCCTCAGAAGAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGCAAGAAGGAGCAGAGTAAACAGAGGGAGCCTCAGAAGAGACC  334

seq1  TGAGGAGGAGGTGTTGACACTCAGAGGGACTCCTGACACAGGAGCTGCCT  400
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAGGAGGAGGTGTTGACACTCAGAGGGACTCATGACACAGGAGCTGCCT  384

seq1  CGGAAGAGAAAGGAGACACTGCTGCAGCTCTGGAAGGTTGGTCATGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGAGAAAGGAGACACTGCTGCAGCTCTGGAAGGTTGGTCATGGCCA  434

seq1  CAGAAGGCTCTGGTTCATGTTTGGTCTAAGTTGTGGTCATACTATCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCTCTGGTTCATGTTTGGTCTAAGTTGTGGTCATACTATCTTGT  484

seq1  GACTAGTCCTCATACACATGTGTGTGTGTGTGGGGGGGGGGTCCATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTCCTCATACACATGTGTGTGTGTGTGGGGGGGGGGTCCATCTCT  534

seq1  TTGTGTGCAGAGGAGGCTGGAGGTCGATTCCGCTGTCACTTTCCATGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCAGAGGAGGCTGGAGGTCGATTCCGCTGTCACTTTCCATGATC  584

seq1  TGTTTTTAATATTACACCATTTCTCTACGGTCTTTCTGTATACCTCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAATATTACACCATTTCTCTACGGTCTTTCTGTATACCTCTCTT  634

seq1  TTAAATTTATGGCCTTGTTTTTTTCCCATGAACTGCTGTGAGGTTGAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTATGGCCTTGTTTTTTTCCCATGAACTGCTGTGAGGTTGAGTC  684

seq1  CCCCGGAGTGTCAGAAACTGTATGTATAAAGCCTCACCCAAATGGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGAGTGTCAGAAACTGTATGTATAAAGCCTCACCCAAATGGCTTTC  734

seq1  TGAACAGCAGTTGAATAGAGACACCAACAGATAGATACAGTAAAGCCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGCAGTTGAATAGAGACACCAACAGATAGATACAGTAAAGCCAGT  784

seq1  GCCTCAGCTCTCTGTAGAGAACCACAGGCAACCAAGGAATGCTGAGATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGCTCTCTGTAGAGAACCACAGGCAACCAAGGAATGCTGAGATAG  834

seq1  AGCATAAGAAATCGTCTTCCATCTGATTTTTTTGAGACAGGGTTTCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGAAATCGTCTTCCATCTGATTTTTTTGAGACAGGGTTTCACTG  884

seq1  AACATAGAGTTAGTATACTGGCTGGTCAGGAAACAGTGCTGTCACGTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGAGTTAGTATACTGGCTGGTCAGGAAACAGTGCTGTCACGTCTG  934

seq1  GCTTTTCTTTTTATTTTTTAAGATTTATTTATTTTATGTATTCACCTTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTTTTTATTTTTTAAGATTTATTTATTTTATGTATTCACCTTTG  984

seq1  CTTTCTTCAGACACACCAGAAGAGGGCATCAGATCCATTGCAGATGGTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCAGACACACCAGAAGAGGGCATCAGATCCATTGCAGATGGTTG  1034

seq1  TGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTAGAGCAGTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTAGAGCAGTC  1084

seq1  AGTGCTCCTAACTGCTGAGCCATCTCTCCAGCCCATGTCTGGCTTTTTAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCCTAACTGCTGAGCCATCTCTCCAGCCCATGTCTGGCTTTTTAT  1134

seq1  GTGATCACTGGGGGTATGATCTGAATTC  1178
      ||||||||||||||||||||||||||||
seq2  GTGATCACTGGGGGTATGATCTGAATTC  1162

seq1: chr1_37918184_37919326
seq2: B6Ng01-164A07.g_70_1198

seq1  GAATTCTCAGTTTCCAGAACTGTTAGGGTTAAATATCTGTTGCTTACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTTCCAGAACTGTTAGGGTTAAATATCTGTTGCTTACAAT  50

seq1  CTACCAAGCGTACAGTGTGTTGTTATATCAATGCACATGAGCTAAGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAGCGTACAGTGTGTTGTTATATCAATGCACATGAGCTAAGACAT  100

seq1  GTTCCATTTTCAGTCGACTTCATGCCCTCCTTCCACTTTTCCCTACCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATTTTCAGTCGACTTCATGCCCTCCTTCCACTTTTCCCTACCAGG  150

seq1  AACATTCTCTCCTCAGCCTCTTACCTGTCTGAAGTCTGTTCAACCTCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTCTCCTCAGCCTCTTACCTGTCTGAAGTCTGTTCAACCTCAGT  200

seq1  ACTTTGTCTTTTCTCCCTCAATTTCCTTTTTAAAGCAGGTTCTCTCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCTTTTCTCCCTCAATTTCCTTTTTAAAGCAGGTTCTCTCTCAG  250

seq1  TCACCCTCCACTCAAGCCAGTGCACTTGTCCCTACTTGAAATCATATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCCACTCAAGCCAGTGCACTTGTCCCTACTTGAAATCATATTAT  300

seq1  CTGTCTGTTTCCCTGTTTGCTGTCTACTTTCTTCTACTGGGATATAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTTTCCCTGTTTGCTGTCTACTTTCTTCTACTGGGATATAAAGT  350

seq1  CCAAGATGTCTAGGCTGTTGTCTGGTTGCTATGTTTGAAAAAAAGTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGTCTAGGCTGTTGTCTGGTTGCTATGTTTGAAAAAAAGTCTAC  400

seq1  CAGAGTTTCTGTATAGAACATTTGTATTTACTCAATGAGTAAATTTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTCTGTATAGAACATTTGTATTTACTCAATGAGTAAATTTTTAG  450

seq1  AGTTAATAAAACATTTTTAAAATAATGAAGTTTAATTAAACAAAGCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATAAAACATTTTTAAAATAATGAAGTTTAATTAAACAAAGCAGCC  500

seq1  TCTGTGGAGGAATGAAAGTAAACCTGAAGAGGACTAATAAATGAATTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAGGAATGAAAGTAAACCTGAAGAGGACTAATAAATGAATTAAA  550

seq1  TAATAAATGATTAATAAACCATTTAATGAATGATTAAAATCAAAATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATGATTAATAAACCATTTAATGAATGATTAAAATCAAAATATAA  600

seq1  AATGTAAGCTTTTAATCGGCATAGCTGCAAGAGCCAAAGAGGCAGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGCTTTTAATCGGCATAGCTGCAAGAGCCAAAGAGGCAGAATAA  650

seq1  AAGTTAAGGAAGACTAAGGCTGTAGAAGGTTCACTGCCAAAAGCAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGGAAGACTAAGGCTGTAGAAGGTTCACTGCCAAAAGCAGAAAA  700

seq1  GTATGCTTCCTTCTTTCCACGAGACCCCTTCCAGAATCAAGCATGGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTTCCTTCTTTCCACGAGACCCCTTCCAGAATCAAGCATGGGCTT  750

seq1  CGTCTCTCAAGAAATGCAAATAAAAGTCTGCTTAGCCTTAGTCTGAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCTCAAGAAATGCAAATAAAAGTCTGCTTAGCCTTAGTCTGAAAAC  800

seq1  TCAAACCTTAAATCTCCACAATTCAAAAATGTTCTGAGTAACAAACAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTTAAATCTCCACAATTCAAAAATGTTCTGAGTAACAAACAGCA  850

seq1  TGAAGCTACAAATGGAAAATTCCATACTTGACCTTGCAAGAATGGCCATA  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGAAGCTACAAATGGAAAATTCCATACTTGACCTTGC-AGAATGGCCATA  899

seq1  GTCAAAACCCCAGTAGACCAAAAGAGTTACAGAAAATTACCTTCAGGCCA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAA-CCCAGTAGACCAAAAGAGTTACAGAAAATTACCTTCAGGCCA  948

seq1  TGAATATAAAGTTCATATGAAACATAAATTTTCTGTTTAGATTTGGTCCC  1000
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TG-ATATAAAGTTCATATGAAACATAAATTTTCTG-TTAGATTTGGTCCC  996

seq1  ATTCCTGGGAAGCTTTATGTACATACAATATCCTAAAGTCCCCAAACTCT  1050
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  ATTCCTGGGAAGCTTTATGTACATACAATATCCTAAAGGTCCCAAACTCT  1046

seq1  GAAACAGCAACACTTCTGATCTTAAGCATTCTGAAGAATGATATCTCACA  1100
      |||||||| |||||||||||||| ||||||||||| |||| |||||| ||
seq2  GAAACAGC-ACACTTCTGATCTT-AGCATTCTGAAAAATG-TATCTC-CA  1092

seq1  TGCATACACAAAGCCAGGAACATTGAGACAACTTTACTGATCA  1143
      ||||||| |||||||||||  ||||    |||  |||||||||
seq2  TGCATAC-CAAAGCCAGGA--ATTG---GAACACTACTGATCA  1129