BAC Information

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BAC

Clone NameB6Ng01-164H21
Chromosome1 (Build37)
Map Location 68,408,730 - 68,409,806
singlet/doubletsinglet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164H21.bB6Ng01-164H21.g
ACCDH956801DH956802
length1,0781,180
definitionDH956801|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H21, 5' end.DH956802|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgctccttaaatccttttttaatgctagagcacgctgacccta
gaaacctaacaagaacatttctcgcatcactgcaaagggtcaaacagatc
ttaggctgggatactgagagatgccttacatgtggaagagcaactccaac
ttgaaagtactttttaagctcagttaaatcgcgcctgccttgctccacag
cacagcttaagtaaattgattcagtggattaatgtagtcatgtcagggga
gacaaacttatcttctatgtgaagtctgaagcttatagaagtattattta
gtaagcttgccgggaagaatgacaactctgtctattcacaagaactgagt
tctgaggtctgagttgtataggtgtaggtgtgaaggagactaagctttaa
gaaataaataataatgataaaaggaacaacactatctctgtccctgcaag
atgtatggagtgcacttatcacattttaaatagatactgcatgtcctttg
ttatctctagtctcagattcaggccagctctctctgggctcttactatca
agaaatgtggcgacttcattttacatttgccttttgtcctaccagaccca
acttcatctcacttagacactgaattttgtgttaggaaagagaaaaatgc
acacattaaaatattaccatttgattttctcaacctacacacccattttt
gcataaaagtagtcataattgtcttcagttgcagattggataatttagaa
atattttttaaagagacaacctctgatactcaattttacatcttctaagt
tgttttttcaaatgtcgtttcttctcctagaaacaaaatagataatatgt
gtattttagcaatagaaagaaaaatgtgtttcttcctgaattaaagtaaa
ccatataaaaatggaagagaaaatgtattttagctgctggactaaacaga
caggtacttttgctcattgtcataaattaatttaagctaagaacattatt
ttagactgaaaactctgctttcattaccatcttttagataaaagtcaatt
tgctatagaaaatttcttatgtgtattt
gaattctcagccaaggaatacccaatggctgagaagcacgtaaaaaaatg
ttcaacatccttagtcatcagggacatgcaaaccaaaacaaccttgagat
tccaccttacacaagtcagaatgactaagatcaaaaactcagatgacagc
agaatgtggagaaagaggaacactcctccactgctggtgggatttcaatt
tggaacaaccactctggaaatcaatttagcggttcctcagaaaattggac
atagtacaacctgcagactcactaatacctctcctgaacatatactcaga
agatactccaacatgtaataaggacacatgctccactatgttcatagcag
ccttatttataataaccaggagttggaaagaacccagatgtctctcaaca
gaagaatggatacagaaaatgtggtacatttacacaatggaatattactc
ttctacaaaaacaaacaaacaaaaaacaacaacaacaacaaaaaaccaat
gaatctttaaaattcttaggcaaatggagggaactagaaaatatcatcct
gagtgaggtaatccaatcacaaaggaacacacgtgatatgcactcactga
taatggatattagtccagaagctcagaatagccaacatacaattcacaaa
ccacatgaaactcaagaagaaggaagaccaaagtgtggattctttgatcc
ttcttagaagtatgaacaaaatacccatgggaggagttacagagacaaaa
tgtggatcagagactgaaggattgaccatccagagactgcctcacctggg
gatccatcccatatacaatcaccaaacccagacactattgtggatgccaa
caagtgcttgctgacaggatcctgatataactctctcctgagaggctcta
ccagtgcctgacaaatacagaagtggatgctcacagccatcattggactg
agcacgggttcccatgaagcactagaaaaagacacatgagctgaagggtt
tgcagcccatagagacaacaatatgactatcagtacccccagaactccag
gactaaatcaccaacaagtgtacacatggtgaactcatgtctcagctgca
tataagcaaggatgctgtcaaagagaaagtctggtctgaagccgatgcca
tggttaggaatggacactggtctacgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68408730_68409806
seq2: B6Ng01-164H21.b_45_1122 (reverse)

seq1  AAATATCACATTAAGAATTTTCTATAGCATATTGACTTTTATCTAAAAGA  50
      ||||| ||||| |  |||||||||||||| ||||||||||||||||||||
seq2  AAATA-CACATAAGAAATTTTCTATAGCAAATTGACTTTTATCTAAAAGA  49

seq1  T-GTAATGGAAGCAGAAGTTTTCAGTCTTAAAATAATG-TCTTAGCTTAA  98
      | |||||| |||||| ||||||||||| |||||||||| |||||||||||
seq2  TGGTAATGAAAGCAG-AGTTTTCAGTC-TAAAATAATGTTCTTAGCTTAA  97

seq1  ATTAATTTAATGACAAATGAGCAAAAGTACCCTGTCTGTTTAGTCCAGCA  148
      |||||||| ||||| |||||||||||||| ||||||||||||||||||||
seq2  ATTAATTT-ATGAC-AATGAGCAAAAGTA-CCTGTCTGTTTAGTCCAGCA  144

seq1  GCTAAAATACATTTTCTCTTCCATTTTTATATTGTTTTACTTTAATTCAG  198
      ||||||||||||||||||||||||||||||| || |||||||||||||||
seq2  GCTAAAATACATTTTCTCTTCCATTTTTATA-TGGTTTACTTTAATTCAG  193

seq1  GAGAGAAACACATTTTTCTTTCTATTGCT-AAATACACATATTATCTATT  247
      || |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GA-AGAAACACATTTTTCTTTCTATTGCTAAAATACACATATTATCTATT  242

seq1  TTGTTTCTAGG-GAAGAAACGACATTTG-AAAAACAACTTAGAAGATGTA  295
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  TTGTTTCTAGGAGAAGAAACGACATTTGAAAAAACAACTTAGAAGATGTA  292

seq1  AAATTGAGTATCAGAGGTTGTCTCTTT-AAAAATA-TTCT-AATTATCCA  342
      ||||||||||||||||||||||||||| ||||||| |||| |||||||||
seq2  AAATTGAGTATCAGAGGTTGTCTCTTTAAAAAATATTTCTAAATTATCCA  342

seq1  ATCTGCAACTGAAGACAATTATGACTACTTTTATGC-AAAATGGGTGTGT  391
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATCTGCAACTGAAGACAATTATGACTACTTTTATGCAAAAATGGGTGTGT  392

seq1  AGGTTGAGAAAATCAAATGGTAATATTTTAATGTGTGCATTTTTCTCTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAGAAAATCAAATGGTAATATTTTAATGTGTGCATTTTTCTCTTT  442

seq1  CCTAACACAAAATTCAGTGTCTAAGTGAGATGAAGTTGGGTCTGGTAGGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACACAAAATTCAGTGTCTAAGTGAGATGAAGTTGGGTCTGGTAGGA  492

seq1  CAAAAGGCAAATGTAAAATGAAGTCGCCACATTTCTTGATAGTAAGAGCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCAAATGTAAAATGAAGTCGCCACATTTCTTGATAGTAAGAGCC  542

seq1  CAGAGAGAGCTGGCCTGAATCTGAGACTAGAGATAACAAAGGACATGCAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGCTGGCCTGAATCTGAGACTAGAGATAACAAAGGACATGCAG  592

seq1  TATCTATTTAAAATGTGATAAGTGCACTCCATACATCTTGCAGGGACAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTTAAAATGTGATAAGTGCACTCCATACATCTTGCAGGGACAGA  642

seq1  GATAGTGTTGTTCCTTTTATCATTATTATTTATTTCTTAAAGCTTAGTCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGTTGTTCCTTTTATCATTATTATTTATTTCTTAAAGCTTAGTCT  692

seq1  CCTTCACACCTACACCTATACAACTCAGACCTCAGAACTCAGTTCTTGTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACACCTACACCTATACAACTCAGACCTCAGAACTCAGTTCTTGTG  742

seq1  AATAGACAGAGTTGTCATTCTTCCCGGCAAGCTTACTAAATAATACTTCT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACAGAGTTGTCATTCTTCCCGGCAAGCTTACTAAATAATACTTCT  792

seq1  ATAAGCTTCAGACTTCACATAGAAGATAAGTTTGTCTCCCCTGACATGAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTTCAGACTTCACATAGAAGATAAGTTTGTCTCCCCTGACATGAC  842

seq1  TACATTAATCCACTGAATCAATTTACTTAAGCTGTGCTGTGGAGCAAGGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAATCCACTGAATCAATTTACTTAAGCTGTGCTGTGGAGCAAGGC  892

seq1  AGGCGCGATTTAACTGAGCTTAAAAAGTACTTTCAAGTTGGAGTTGCTCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGCGATTTAACTGAGCTTAAAAAGTACTTTCAAGTTGGAGTTGCTCT  942

seq1  TCCACATGTAAGGCATCTCTCAGTATCCCAGCCTAAGATCTGTTTGACCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGTAAGGCATCTCTCAGTATCCCAGCCTAAGATCTGTTTGACCC  992

seq1  TTTGCAGTGATGCGAGAAATGTTCTTGTTAGGTTTCTAGGGTCAGCGTGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTGATGCGAGAAATGTTCTTGTTAGGTTTCTAGGGTCAGCGTGC  1042

seq1  TCTAGCATTAAAAAAGGATTTAAGGAGCATGAATTC  1077
      ||||||||||||||||||||||||||||||||||||
seq2  TCTAGCATTAAAAAAGGATTTAAGGAGCATGAATTC  1078