BAC Information

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BAC

Clone NameB6Ng01-164I08
ChromosomeY (Build37)1 (Build37)
Map Location 573,480 - 573,568113,252,930 - 113,253,138
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I08.bB6Ng01-164I08.g
ACCDH956823DH956824
length1,008209
definitionDH956823|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I08, 5' end.DH956824|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,480 - 573,568)(113,252,930 - 113,253,138)
sequence
gaattccatccttgtctgttgttatgtcacctttttcatttcatattttg
ttgctttggatacgctctttctgtcttttggctagtttagctttttggtt
agtttggtttgttgatcttattgattccccccacacacaccccccaaaaa
ccaactctttgtttcagtgattccttttattctctttttttacagttgat
tgatttcagctctgattttattatttcctgctttctactcctgtttggta
tcttttttcctagagatttcagatatacttctaaattgctgctatgagac
atttccttctttctatcctttctttctttctttttctgtttttctgtttt
tctttttttattagatattttctttatttacatttaaaatgctacccgaa
aagctccctgtaccctccccctgccctgctcccctacccacccactccca
cttcttgccctgactttcccctgtactggggcatataaagtttgcaagac
caaggggcctctttccaatgatggctgactaggccatcttctgctacata
tgtagctaaagacacgagctctgggggtactggttggttcatattgttct
tcccccctttcaggttgcagaccccttcagctccttgggtactttctcta
gctcctccattgggggtcctgtgttccacccaatagatgactgtgtgcat
ccacttctgtatttgccagccactggcatagcttcacaccagacagcaat
gtcagggtcctttcagcgaaatcttggtggcatatgcaatagtgtctggg
tttgatggctgattatgggatggatccccaggtagggtagtctctggatg
gtccatgttttcatcttagctccaaattttgtctctgtaactccttccat
aggtattttgttccctattctaagaagaatgaagtatccacacattggtc
ttccttcttcttaatttcttttgttttgcaaatgtatctagggattctag
ttctgggc
aaatctcaaatactgtttatagtgtgaatagaatcagagcaggattaaac
ctcttctatgcctgggagaatttctgagttatatttttactggcagagta
tttaaaattctactactacttattttgaactttatcaataccttgatatt
tttatgtagtatgcatatatatatatatatatgtgtgtgtgtgtgtgtgt
gtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573480_573568
seq2: B6Ng01-164I08.b_461_548 (reverse)

seq1  GGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAGA  50
      ||||||||||||||||||||||||||||||||||||   ||||| |||||
seq2  GGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAAAGTCAGGG-CAAGA  49

seq1  AGTGGGAGAAGGTGGGTAGGGTAGCAAGGCAGGGGGAGG  89
      ||||||||  ||||||||||| |||| ||||||||||||
seq2  AGTGGGAGTGGGTGGGTAGGGGAGCAGGGCAGGGGGAGG  88

seq1: chr1_113252930_113253138
seq2: B6Ng01-164I08.g_72_280 (reverse)

seq1  CACACACACACACACACACACACACACATATATATATATATATATGCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACATATATATATATATATATGCATA  50

seq1  CTACATAAAAATATCAAGGTATTGATAAAGTTCAAAATAAGTAGTAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAAAAATATCAAGGTATTGATAAAGTTCAAAATAAGTAGTAGTAG  100

seq1  AATTTTAAATACTCTGCCAGTAAAAATATAACTCAGAAATTCTCCCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAATACTCTGCCAGTAAAAATATAACTCAGAAATTCTCCCAGGC  150

seq1  ATAGAAGAGGTTTAATCCTGCTCTGATTCTATTCACACTATAAACAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAGGTTTAATCCTGCTCTGATTCTATTCACACTATAAACAGTAT  200

seq1  TTGAGATTT  209
      |||||||||
seq2  TTGAGATTT  209