BAC Information

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BAC

Clone NameB6Ng01-164M14
Chromosome1 (Build37)
Map Location 51,569,135 - 51,570,272
singlet/doubletsinglet
Overlap genenone
Upstream geneTmeff2, Sdpr, LOC383504, Obfc2a
Downstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M14.bB6Ng01-164M14.g
ACCDH957019DH957020
length1,1641,131
definitionDH957019|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M14, 5' end.DH957020|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctatctcacaccagtcagaatagctaagatcataaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattattggtg
ggattgcaagcttgtacaaccactctggaaatcagtcgggcagtttctta
gaaaattggacatagtactaccggaggatccagcaatacctctcctgagc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccagtat
gttaatagcagccttatttataatagccagcagctggaaagaacccagat
gcccctcaacaaaggaatggatacagaaaatgttgtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaact
taggataaccaagatataagatacaaattactaaacgcatgcaactcaag
aagaatgaacaccaaagtatggacactttgctccttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgtgacga
aaggatggaccatctagagactgccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctattggatggatcacagggccctcaat
ggagtagctagagaagtactcaaggagctaaagggaactgcaaccctata
gttggacaacattatgaactaccagtacctcagagctctgactctagctg
catattgtagcaagatgccagtcggccatcactgccaagagaggcccaat
gacaccaactttaataggccccatacagggaccccaggtcaaagtggaat
ggtgggtaagcgaa
gaattccacgtcccttggagaaaggacgggaggacagttacagaagactt
tggtgtgactgttgtcaggaaccatggatgtgattaatgctttactgtgg
aaatcgatcaaaatgtgtctatgttcgactggtgacctgtgcagttctct
cattctgtgtccccaaacaaataacatctctaatctttctgttctctggc
tgtaaaacaggctcaataactgtattcacagttgggtatagtggctgtcc
tgtattttcagaacttggcaggcttgcacaagaggttgccaaaagttcaa
ggccagtctgagctagagactgagagcccaggttacagagaaggaccttt
tctcaaaaaacaaacagataacaacaatgatatttgtacctgtgatgttc
tgataataagatgaaataagaggagcatggtacttagaacaatgccaaca
aaatgttaactaagaacaataatgatttcctagtaacaccagagtagaca
ccaaatcactgaagaccactaatctaatggtctcgagttccatgtttagc
aaaatcatttcactgttgaaatggttcccttacagtgctgacgttagccc
ctcctgtgctcgtttttaagttagcatatgttaagagcaacatatgaatt
aataattagaaaagcatttaccttaagttgcataatatttggttcagcac
tcttggacagctcattccacagctttgggtctccaaggaaactgggttgg
cagctgaagagcagggctagtggagctacctgcccagcccattaggtggg
accaacctacgggctcacagattgcccactccttccagaaagccccaata
catccccccacaccttgttcatgaatttcaaactgctctggctccttttt
cttggtaaagcagccctcagtgttagtcagtgactcagcggacccaacag
ccacctgtttcctgcacgtggcttcaattgactgggcttgagtaatttca
cagcaggtaattacatcacagtgctcagttttgtgcaaactttagacttg
ttttgcacggtgcagtttaagtggtggacaatctttcaaataatatacat
aattgtctacaagctaatgggctcctgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_51569135_51570272
seq2: B6Ng01-164M14.g_70_1200

seq1  GAATTCCACGTCCCTTGGAGAAAGGACGGGAGGACAGTTACAGAAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGTCCCTTGGAGAAAGGACGGGAGGACAGTTACAGAAGACTT  50

seq1  TGGTGTGACTGTTGTCAGGAACCATGGATGTGATTAATGCTTTACTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGACTGTTGTCAGGAACCATGGATGTGATTAATGCTTTACTGTGG  100

seq1  AAATCGATCAAAATGTGTCTATGTTCGACTGGTGACCTGTGCAGTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGATCAAAATGTGTCTATGTTCGACTGGTGACCTGTGCAGTTCTCT  150

seq1  CATTCTGTGTCCCCAAACAAATAACATCTCTAATCTTTCTGTTCTCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTGTCCCCAAACAAATAACATCTCTAATCTTTCTGTTCTCTGGC  200

seq1  TGTAAAACAGGCTCAATAACTGTATTCACAGTTGGGTATAGTGGCTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACAGGCTCAATAACTGTATTCACAGTTGGGTATAGTGGCTGTCC  250

seq1  TGTATTTTCAGAACTTGGCAGGCTTGCACAAGAGGTTGCCAAAAGTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTCAGAACTTGGCAGGCTTGCACAAGAGGTTGCCAAAAGTTCAA  300

seq1  GGCCAGTCTGAGCTAGAGACTGAGAGCCCAGGTTACAGAGAAGGACCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCTGAGCTAGAGACTGAGAGCCCAGGTTACAGAGAAGGACCTTT  350

seq1  TCTCAAAAAACAAACAGATAACAACAATGATATTTGTACCTGTGATGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAAACAAACAGATAACAACAATGATATTTGTACCTGTGATGTTC  400

seq1  TGATAATAAGATGAAATAAGAGGAGCATGGTACTTAGAACAATGCCAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATAAGATGAAATAAGAGGAGCATGGTACTTAGAACAATGCCAACA  450

seq1  AAATGTTAACTAAGAACAATAATGATTTCCTAGTAACACCAGAGTAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTAACTAAGAACAATAATGATTTCCTAGTAACACCAGAGTAGACA  500

seq1  CCAAATCACTGAAGACCACTAATCTAATGGTCTCGAGTTCCATGTTTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCACTGAAGACCACTAATCTAATGGTCTCGAGTTCCATGTTTAGC  550

seq1  AAAATCATTTCACTGTTGAAATGGTTCCCTTACAGTGCTGACGTTAGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTTCACTGTTGAAATGGTTCCCTTACAGTGCTGACGTTAGCCC  600

seq1  CTCCTGTGCTCGTTTTTAAGTTAGCATATGTTAAGAGCAACATATGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGCTCGTTTTTAAGTTAGCATATGTTAAGAGCAACATATGAATT  650

seq1  AATAATTAGAAAAGCATTTACCTTAAGTTGCATAATATTTGGTTCAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAGAAAAGCATTTACCTTAAGTTGCATAATATTTGGTTCAGCAC  700

seq1  TCTTGGACAGCTCATTCCACAGCTTTGGGTCTCCAAGGAAACTGGGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACAGCTCATTCCACAGCTTTGGGTCTCCAAGGAAACTGGGTTGG  750

seq1  CAGCTGAAGAGCAGGGCTAGTGGAGCTACCTGCCCAGCCCATTAGGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAAGAGCAGGGCTAGTGGAGCTACCTGCCCAGCCCATTAGGTGGG  800

seq1  ACCAACCTACGGGCTCACAGATTGCCCACTCCTTCCAGAAAGCCCCAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCTACGGGCTCACAGATTGCCCACTCCTTCCAGAAAGCCCCAATA  850

seq1  CATCCCCCCACACCTTGTTCATGAATTTCAAACTGCTCTGGCTCCTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCCCACACCTTGTTCATGAATTTCAAACTGCTCTGGCTCCTTTTT  900

seq1  CTTGGTAAAGCAGCCCTCAGTGTTAGTCAGTGACCTCAGCGGACCCAACA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTGGTAAAGCAGCCCTCAGTGTTAGTCAGTGA-CTCAGCGGACCCAACA  949

seq1  GCCACCTGTTTTCCTGCACGTGGCTTCAATTGACTGGGCTTGAGTAATTT  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTG-TTTCCTGCACGTGGCTTCAATTGACTGGGCTTGAGTAATTT  998

seq1  CACAGCAAGGTAATTACATCAACAGGTTGGCTCAGGTTTTGTGCAAACTT  1050
      |||||| ||||||||||||| ||||    ||||| |||||||||||||||
seq2  CACAGC-AGGTAATTACATC-ACAG---TGCTCA-GTTTTGTGCAAACTT  1042

seq1  AGAACCTGTTTTGCACGGTGCAGTTTTAGT-GTGGACCATCTTTCCAATA  1099
         || |||||||||||||||||||| ||| |||||| ||||||| ||||
seq2  TAGACTTGTTTTGCACGGTGCAGTTTAAGTGGTGGACAATCTTTCAAATA  1092

seq1  TATATACATATATTGTCTACAAGCT-ATTGGCT-CTGAGAA  1138
       ||||||||| |||||||||||||| || |||| |||||||
seq2  -ATATACATA-ATTGTCTACAAGCTAATGGGCTCCTGAGAA  1131