BAC Information

Click to search

BAC

Clone NameB6Ng01-164N24
Chromosome1 (Build37)
Map Location 68,728,622 - 68,729,714
singlet/doubletsinglet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164N24.bB6Ng01-164N24.g
ACCDH957087DH957088
length1,1631,090
definitionDH957087|Mus musculus domesticus DNA, BAC clone: B6Ng01-164N24, 5' end.DH957088|Mus musculus domesticus DNA, BAC clone: B6Ng01-164N24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaacggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacatc
agatgctggcgaggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaactgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcaacccta
taggtggatcacattatggactacagtaccccggagctcttgactctagc
tgcatatgtatcaaagatgcctagtcgcatcactgaagagagccattaac
tacaactttaatggccaaacaggggacgtcaggcaaaatggggattggca
agttagtgatggg
gaattctttttctggcacgatgtttaactcaaattgagggaaaattacct
aacgttccttggagaccaattgcttccaaccagactacttattaaataat
tccagttcagacccacaattgtaacaggcaccttcgtcatcccttccctg
agaacaagcacatttttatttcaactgatcattaaattctgtaaattgat
tctgtctctgtgaagttgggtaatagttcttagaaagtgactacaggcta
acttcactgatgagcaatgagagcctttgctcattttgaccttgacatcc
caaagggatcttaatgaaatataatctatttaagttgttatagatgtttt
cacagtttccacaacctctctttctcacatcttgccaaatagttctaatt
gctgttcaagcacacatttgacactgatttagggtgttatgtagaaacat
agataataatctcttcttgaaaagtaatgcaaatctgaatgctagatatt
tataaatatgtttgactcacattgcatatgatacatattaggtaacatta
atgttgattataaaaatatctggaattaaaatattgccttcatttatggt
gttcaaacaaagaaattgactttccattgaaagataattttgtatgattt
gccctaatattgccaactatttagatactccaagtataatttcattactc
aaaaagggaatattccctcagtaaatgtacacacacacaccacacattaa
ggagctactacgtgtaatgtaatttctaataaaagctgttttcacataac
cttgcatgtatgtgtttgtatctaagtgttggtgaggatcatcattacta
tgtcttttcagaagatgagattagtaatattatgtacacggtctaggaaa
gtatctcttagcatgtcactgggagggaagcaatcttacatgcatatgct
aaatacacagatgaagtatgtcatttaaacaggacaataaagagttcata
ttacattattagagatgttgtatccatttcagtggtaaactattacatgg
aagaaaagttaatcccatttcttgccaaacatcattaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68728622_68729714
seq2: B6Ng01-164N24.g_64_1153 (reverse)

seq1  TGTTAATGGATGGTTTGGC-AGAATGGATTTTAATTTTTCTTCATTGTTA  49
      ||||||| ||| ||||||| ||||  |   |||| ||||||||  || ||
seq2  TGTTAAT-GAT-GTTTGGCAAGAAATGGGATTAACTTTTCTTCCATG-TA  47

seq1  ATAGTTTACCACTTGAAATTGGATAC-ACATCTCTAATATGTTAATATGA  98
      |||||||||||| ||||| ||||||| ||||||||||||   ||||||||
seq2  ATAGTTTACCAC-TGAAA-TGGATACAACATCTCTAATAATGTAATATGA  95

seq1  ACTCTTTA-TGTCCTGTTTAAATGACATACTTCATCTGTGTATTTAGCAT  147
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTATTGTCCTGTTTAAATGACATACTTCATCTGTGTATTTAGCAT  145

seq1  ATGCATGTAAGATTGCTTCCCTCCCAGTGACATGCTAGGAGATACTTTCC  197
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGCATGTAAGATTGCTTCCCTCCCAGTGACATGCTAAGAGATACTTTCC  195

seq1  TAGACCGTGTACATAATATTACTAATCTCATTCTTCTGAAAAGACATAGT  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGACCGTGTACATAATATTACTAATCTCA-TCTTCTGAAAAGACATAGT  244

seq1  AATGATGATCCTCACCAACACTTAGATACAAACACATACATGCAAGGTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGATCCTCACCAACACTTAGATACAAACACATACATGCAAGGTTA  294

seq1  TGTGAAAACAGCTTTTATTAGAAATTACATTACACGTAGTAGCTCCTTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAACAGCTTTTATTAGAAATTACATTACACGTAGTAGCTCCTTAA  344

seq1  TGTGTGGTGTGTGTGTGTACATTTACTGAGGGAATATTCCCTTTTTGAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTGTGTGTGTGTACATTTACTGAGGGAATATTCCCTTTTTGAGT  394

seq1  AATGAAATTATACTTGGAGTATCTAAATAGTTGGCAATATTAGGGCAAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTATACTTGGAGTATCTAAATAGTTGGCAATATTAGGGCAAAT  444

seq1  CATACAAAATTATCTTTCAATGGAAAGTCAATTTCTTTGTTTGAACACCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAAATTATCTTTCAATGGAAAGTCAATTTCTTTGTTTGAACACCA  494

seq1  TAAATGAAGGCAATATTTTAATTCCAGATATTTTTATAATCAACATTAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGGCAATATTTTAATTCCAGATATTTTTATAATCAACATTAAT  544

seq1  GTTACCTAATATGTATCATATGCAATGTGAGTCAAACATATTTATAAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTAATATGTATCATATGCAATGTGAGTCAAACATATTTATAAATA  594

seq1  TCTAGCATTCAGATTTGCATTACTTTTCAAGAAGAGATTATTATCTATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCATTCAGATTTGCATTACTTTTCAAGAAGAGATTATTATCTATGT  644

seq1  TTCTACATAACACCCTAAATCAGTGTCAAATGTGTGCTTGAACAGCAATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATAACACCCTAAATCAGTGTCAAATGTGTGCTTGAACAGCAATT  694

seq1  AGAACTATTTGGCAAGATGTGAGAAAGAGAGGTTGTGGAAACTGTGAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATTTGGCAAGATGTGAGAAAGAGAGGTTGTGGAAACTGTGAAAA  744

seq1  CATCTATAACAACTTAAATAGATTATATTTCATTAAGATCCCTTTGGGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATAACAACTTAAATAGATTATATTTCATTAAGATCCCTTTGGGAT  794

seq1  GTCAAGGTCAAAATGAGCAAAGGCTCTCATTGCTCATCAGTGAAGTTAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGTCAAAATGAGCAAAGGCTCTCATTGCTCATCAGTGAAGTTAGC  844

seq1  CTGTAGTCACTTTCTAAGAACTATTACCCAACTTCACAGAGACAGAATCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTCACTTTCTAAGAACTATTACCCAACTTCACAGAGACAGAATCA  894

seq1  ATTTACAGAATTTAATGATCAGTTGAAATAAAAATGTGCTTGTTCTCAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAGAATTTAATGATCAGTTGAAATAAAAATGTGCTTGTTCTCAGG  944

seq1  GAAGGGATGACGAAGGTGCCTGTTACAATTGTGGGTCTGAACTGGAATTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGATGACGAAGGTGCCTGTTACAATTGTGGGTCTGAACTGGAATTA  994

seq1  TTTAATAAGTAGTCTGGTTGGAAGCAATTGGTCTCCAAGGAACGTTAGGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAGTAGTCTGGTTGGAAGCAATTGGTCTCCAAGGAACGTTAGGT  1044

seq1  AATTTTCCCTCAATTTGAGTTAAACATCGTGCCAGAAAAAGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCCTCAATTTGAGTTAAACATCGTGCCAGAAAAAGAATTC  1090