BAC Information

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BAC

Clone NameB6Ng01-165N13
Chromosome1 (Build37)
Map Location 23,876,724 - 23,877,500
singlet/doubletsinglet
Overlap geneSmap1
Upstream geneEG665725, LOC665731, 4933415F23Rik, Rn4.5s-ps4, EG623356, Ogfrl1, LOC665782, B3gat2
Downstream gene1110058L19Rik, 4921533L14Rik, LOC665808, Col9a1, Col19a1, LOC100040475, LOC665829, Lmbrd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165N13.bB6Ng01-165N13.g
ACCDH957792DH957793
length1,120780
definitionDH957792|Mus musculus domesticus DNA, BAC clone: B6Ng01-165N13, 5' end.DH957793|Mus musculus domesticus DNA, BAC clone: B6Ng01-165N13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaacggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggattcagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagctttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggattcagaaaatgtggtacatctacacaatg
gagtactactcagctattaagaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggagagcacattattatacttaccagtacccggagctcttgactcta
gctgctatgtatcaaaagatggctagtatgcatcacttgaaggagcccat
tggacttgcaactttatatgccagtacaggacgccagggccaaaatgaaa
gtggtggttaggaagttggt
gaattctttgatctgtaggtttttggtcaaaaaacccttttctgactatg
gcattgttgctataagcatttgaaagctaatgtcagattttttttcttga
agaactctcaagtgttacatagaaaaaaaaacatgtactttatgggataa
tgaatttagaatggtcagtgatgattgttagagtatgttctgagtgaagg
gggtaaattacaagtattctgtattcttcaagtcttgtgtgcacatattt
gagagttttagtttcctttgattctaccttttcctatgtctactccttga
caaatggcatactaagcttgagagacacaaaggtgtagccttgcagactt
tacagtctagtgagggcaaataggttagctcatacagcagtttataatgc
acagcatgtatgctgtgccacgctaatatattatattgtgttctgaatag
gcactgtttctaaggatcaggaggtatttcatgtagagaaagcagcttgt
ggagaaagtatggttggagtaccgtgtttcaggactttcaggttgaatag
tttgaaggaaataggaatgcaagggggagagaagtagggggaagggcctt
aggaatccactgaaggcgattggccttactctgaaggctgtggtacatta
acgatgagtgttaaggggaaagaggcgaaggatcagattttcatatgctg
acactgttctactggctcttggggaagtgaaattttatggtaattgagtg
aaataaaagccttaataaccaggcttaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_23876724_23877500
seq2: B6Ng01-165N13.g_68_847 (reverse)

seq1  GATTAAGCCTGGTTATTAAGGCTTTTA-TTCACTC-ATTACCATAAAA-T  47
      ||||||||||||||||||||||||||| ||||||| |||||||||||| |
seq2  GATTAAGCCTGGTTATTAAGGCTTTTATTTCACTCAATTACCATAAAATT  50

seq1  TCACTTCCCCAAGAGCCAGTAGAACAGTGTCAGCATATGAAAATCTGATC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCCCAAGAGCCAGTAGAACAGTGTCAGCATATGAAAATCTGATC  100

seq1  CTTCGCCTCTTTCCCCTTAACACTCATCGTTAATGTACCACAGCCTTCAG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCCTCTTTCCCCTTAACACTCATCGTTAATGTACCACAGCCTTCAG  150

seq1  AGTAAGGCCAATCGCCTTCAGTGGATTCCTAAGGCCCTTCCCCCTACTTC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGCCAATCGCCTTCAGTGGATTCCTAAGGCCCTTCCCCCTACTTC  200

seq1  TCTCCCCCTTGCATTCCTATTTCCTTCAAACTATTCAACCTGAAAGTCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCTTGCATTCCTATTTCCTTCAAACTATTCAACCTGAAAGTCCT  250

seq1  GAAACACGGTACTCCAACCATACTTTCTCCACAAGCTGCTTTCTCTACAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACGGTACTCCAACCATACTTTCTCCACAAGCTGCTTTCTCTACAT  300

seq1  GAAATACCTCCTGATCCTTAGAAACAGTGCCTATTCAGAACACAATATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACCTCCTGATCCTTAGAAACAGTGCCTATTCAGAACACAATATAA  350

seq1  TATATTAGCGTGGCACAGCATACATGCTGTGCATTATAAACTGCTGTATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGCGTGGCACAGCATACATGCTGTGCATTATAAACTGCTGTATG  400

seq1  AGCTAACCTATTTGCCCTCACTAGACTGTAAAGTCTGCAAGGCTACACCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACCTATTTGCCCTCACTAGACTGTAAAGTCTGCAAGGCTACACCT  450

seq1  TTGTGTCTCTCAAGCTTAGTATGCCATTTGTCAAGGAGTAGACATAGGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTCTCAAGCTTAGTATGCCATTTGTCAAGGAGTAGACATAGGAA  500

seq1  AAGGTAGAATCAAAGGAAACTAAAACTCTCAAATATGTGCACACAAGACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGAATCAAAGGAAACTAAAACTCTCAAATATGTGCACACAAGACT  550

seq1  TGAAGAATACAGAATACTTGTAATTTACCCCCTTCACTCAGAACATACTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATACAGAATACTTGTAATTTACCCCCTTCACTCAGAACATACTC  600

seq1  TAACAATCATCACTGACCATTCTAAATTCATTATCCCATAAAGTACATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATCATCACTGACCATTCTAAATTCATTATCCCATAAAGTACATGT  650

seq1  TTTTTTTTCTATGTAACACTTGAGAGTTCTTCAAGAAAAAAAATCTGACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTATGTAACACTTGAGAGTTCTTCAAGAAAAAAAATCTGACA  700

seq1  TTAGCTTTCAAATGCTTATAGCAACAATGCCATAGTCAGAAAAGGGTTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTCAAATGCTTATAGCAACAATGCCATAGTCAGAAAAGGGTTTT  750

seq1  TTGACCAAAAACCTACAGATCAAAGAATTC  777
      ||||||||||||||||||||||||||||||
seq2  TTGACCAAAAACCTACAGATCAAAGAATTC  780