BAC Information

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BAC

Clone NameB6Ng01-165P04
Chromosome1 (Build37)
Map Location 161,253,302 - 161,254,283
singlet/doubletsinglet
Overlap geneRfwd2
Upstream gene6430517E21Rik, Astn1, Pappa2, 4930562F17Rik, EG240853, LOC664972
Downstream geneEG620484, Tnr, 4930523C07Rik, 4930562F07Rik, Tnn, Mrps14, Cacybp, Rabgap1l
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165P04.g
ACCDH957866
length980
definitionDH957866|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccatgcattattgaaaagaactcatattttctagtgttggagg
gaacatgctataaatgaatctttatacactctggactcttggtgtttaat
tctgttgtccagatagtctgtctattagtgaaagaggcctttaaactcct
ctattactctactgaaatctttccttaggcatattaatatttttcatatt
tatttgtatgctcaaatattgagtgcattcatgctaagagttattcctct
tcctctgatgtggcccaccttgccctttttgctgacatgatttaaagtct
cttaaagtcagtgtggttactactgcttagtttctttttgaaaatttcat
ttgcatggaatgtatttttctccagttttaagctatgcttggctttaaag
ttgtaaaaagtctcatgccaatagacttaatgtatttatgtctttattat
tattttggttgttttgtccttttattgcctgtacacaattatttaagacc
ctttgaatattcatatctatcaaccctttgtcaaactctctttgacagct
tatattcattttgcttagatgataactccatgagtggtgttggtgtatat
tcatacccaataatgtctttacatgaaaggactaaagatttattacctgg
tatagtgcttatccttccagatattttaaataagttattgttttttttct
gagtgtacagccagtgctgctatttcagtactatagagaatccccaaaag
cagaggttcccaccccctacctgtatgtgtgctattcaagagaataatat
gagtacttataaagtttggtgcatcatatagtaagcctctacctgcggct
aactatggtgagcccagcttatcctcagacacagcctcttgtagacactg
atttcgttactagaaatcatgttctgcaagtattgggttcacgatgacag
gcatctcagtggagtcatgctagcagccca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_161253302_161254283
seq2: B6Ng01-165P04.g_68_1047

seq1  GAATTCTCCATGCATTATTGAAAAGAACTCATATTTTCTAGTGTTGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGCATTATTGAAAAGAACTCATATTTTCTAGTGTTGGAGG  50

seq1  GAACATGCTATAAATGAATCTTTATACACTCTGGACTCTTGGTGTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCTATAAATGAATCTTTATACACTCTGGACTCTTGGTGTTTAAT  100

seq1  TCTGTTGTCCAGATAGTCTGTCTATTAGTGAAAGAGGCCTTTAAACTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTCCAGATAGTCTGTCTATTAGTGAAAGAGGCCTTTAAACTCCT  150

seq1  CTATTACTCTACTGAAATCTTTCCTTAGGCATATTAATATTTTTCATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTCTACTGAAATCTTTCCTTAGGCATATTAATATTTTTCATATT  200

seq1  TATTTGTATGCTCAAATATTGAGTGCATTCATGCTAAGAGTTATTCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTATGCTCAAATATTGAGTGCATTCATGCTAAGAGTTATTCCTCT  250

seq1  TCCTCTGATGTGGCCCACCTTGCCCTTTTTGCTGACATGATTTAAAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGATGTGGCCCACCTTGCCCTTTTTGCTGACATGATTTAAAGTCT  300

seq1  CTTAAAGTCAGTGTGGTTACTACTGCTTAGTTTCTTTTTGAAAATTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTCAGTGTGGTTACTACTGCTTAGTTTCTTTTTGAAAATTTCAT  350

seq1  TTGCATGGAATGTATTTTTCTCCAGTTTTAAGCTATGCTTGGCTTTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGGAATGTATTTTTCTCCAGTTTTAAGCTATGCTTGGCTTTAAAG  400

seq1  TTGTAAAAAGTCTCATGCCAATAGACTTAATGTATTTATGTCTTTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAAAGTCTCATGCCAATAGACTTAATGTATTTATGTCTTTATTAT  450

seq1  TATTTTGGTTGTTTTGTCCTTTTATTGCCTGTACACAATTATTTAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGTTGTTTTGTCCTTTTATTGCCTGTACACAATTATTTAAGACC  500

seq1  CTTTGAATATTCATATCTATCAACCCTTTGTCAAACTCTCTTTGACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATATTCATATCTATCAACCCTTTGTCAAACTCTCTTTGACAGCT  550

seq1  TATATTCATTTTGCTTAGATGATAACTCCATGAGTGGTGTTGGTGTATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATTTTGCTTAGATGATAACTCCATGAGTGGTGTTGGTGTATAT  600

seq1  TCATACCCAATAATGTCTTTACATGAAAGGACTAAGGATTTATTACCTGG  650
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCATACCCAATAATGTCTTTACATGAAAGGACTAAAGATTTATTACCTGG  650

seq1  TATAGTGCTTATCCTTCCAGATATTTTAAATAAGTTATTG-TTTTTTTCT  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATAGTGCTTATCCTTCCAGATATTTTAAATAAGTTATTGTTTTTTTTCT  700

seq1  GAGTGTACAGCCAGTGCTGCTATTTCAGTACTATAGAGAATCCCCAAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTACAGCCAGTGCTGCTATTTCAGTACTATAGAGAATCCCCAAAAG  750

seq1  CAGAGGTTCCCACCCCCAACCTTTATGTGTGCTATTCAAGAGAATAGTAG  799
      ||||||||||||||||| |||| ||||||||||||||||||||||| || 
seq2  CAGAGGTTCCCACCCCCTACCTGTATGTGTGCTATTCAAGAGAATAATAT  800

seq1  GAGTACTTAGAAAGTATGGTTCATCATATAGTAAGCCTCTACCTGCGGCT  849
      ||||||||| ||||| |||| |||||||||||||||||||||||||||||
seq2  GAGTACTTATAAAGTTTGGTGCATCATATAGTAAGCCTCTACCTGCGGCT  850

seq1  AACTATGGTGGGCCCAGCTTTTCCTCAGCCAACAGCCTCTTGTAAGACAC  899
      |||||||||| ||||||||| ||||||| | |||||||||||| ||||||
seq2  AACTATGGTGAGCCCAGCTTATCCTCAGAC-ACAGCCTCTTGT-AGACAC  898

seq1  TGATTTC-TTACTAGAAATCATGTTCTGCTAGGTATTGGGTTCAGGATGA  948
      ||||||| ||||||||||||||||||||| | |||||||||||| |||||
seq2  TGATTTCGTTACTAGAAATCATGTTCTGC-AAGTATTGGGTTCACGATGA  947

seq1  CAGGCATCTCAGTGTGAGTCATTGCTAG-AGCCCA  982
      |||||||||||||| |||||| |||||| ||||||
seq2  CAGGCATCTCAGTG-GAGTCA-TGCTAGCAGCCCA  980