BAC Information

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BAC

Clone NameB6Ng01-166C05
Chromosome1 (Build37)
Map Location 125,046,968 - 125,048,139
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666971, LOC666983
Downstream geneDpp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166C05.bB6Ng01-166C05.g
ACCDH957997DH957998
length9911,165
definitionDH957997|Mus musculus domesticus DNA, BAC clone: B6Ng01-166C05, 5' end.DH957998|Mus musculus domesticus DNA, BAC clone: B6Ng01-166C05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaacataattaaagcaatttattgcaaaccag
cagccaatatcaaattaagtggagaaatacctgaagcaatcccactgaaa
tcagggacaaggatgcccactctccccatatctattaaatacaatactca
aagttttagctagaacaataagacaacaaaaagagataaaagggatacaa
attggaaaagaagaagtaaaggtatcactatttgtagatgatatgatagt
atacataagaaaatccaaaaattctaccagagaacttctctagctgataa
acaacttcagcaatgtggctggatataaaattaacacaaataaatcagta
gccttcctttatacaaaggataaacaggctgagaaagaaattatggaaat
aattcccttcacaataaccacaaataacataaaatatcttggggtaactc
taaccaaagaaatgaaagacctgtatgacaataacttcaagtctctcaag
aaagaaattaaagatctcagaaaatggagagatctcccatgctcatgaat
cggaagaattagcatagtaaaaatggccatcctactaaaggcaatttaca
gattcaatgcaatccttatcaaaatcccaacacaattcttcaaagacatg
gaaagagcaattctcagactcatctggaaagtaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaacagaatttcaaaaacaatttttaacaataagagaaca
gctgggggaattaccatccctgacctgaagctttaatacagagcaatagt
gataaaaaactgcatggtgttgatacagagacaaacatgttgatcaaagg
aatagaatcaaagatctagttggtcatcaatgggatgagaggcccttggt
cttgtgaagattatataccccagtactggggaatgccagggccaggaagc
gggagtgggtgggttggggagcaggccaggggggaaggtat

gaattcttaaaagagatagcaagtaagatgcttacatcagcactgtccac
acagcaataccacacacctattgctgaagccagactacagattcaagtac
cattctgtgctcttagctgatattcagtaagtaacattctgtccagtcac
attcttgtgtttattctaggaaaaacaaatcaagactagaatttctcgac
agaattcaatgaatattttcagggaatttaaaatatgtttccatatttcc
ttccaagaaaaataatgcaataccaccaaaaagagatgaaaagtttatgt
tcacacatttgctgcattgatctctgaggtgtgctgccaaaatgctggta
agtctcctaaaactacacagtaggcacatatgtgaagcaatatctcagat
gaaagtcaccgtctactctcttggacatcagagtactagctaataagttt
cggcaaaagatgtttagcttattatattgcctgtgtatattttaatacat
acataaaggacatatttgatactcatccttaaataacatttgattgcgag
ggaatgagagctctacagtgtaaaagagcgagaatgagtacatgtgtgcc
tgggcacatgtgtgggttatgaaagctgattctctccttcaattgcatgc
accgcatcccaggagtgcacacagagaaaatattagattgtttatcgtcc
tctctatacaatatgcttaacatatttccttggtccagtggtacatattc
aggtggattgcaatgctttattattaaaataatttaatatatacacatcc
ctatttcaggcagagattcatattacaaggtctgcataatatcacactgc
atctcaatgaatccaacactatcacaggataatagtatataaaactgtca
attatttttcatacctgattagttactaaatagattgttttgcttcattt
ttacaatatctgtggaggataaacggaattctaagcattgttttgtagag
taatgtattttgtgcatgtatggataagaagaggaatatcacagcacacc
atgtggaaggtcagaaggaaacctgaacaaatagtctctcctaattcccc
ttacatgctctctatggaggtcctatggggggtagccttgttgaaaactg
tgtctctgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125046968_125048139
seq2: B6Ng01-166C05.g_66_1230 (reverse)

seq1  --CCCCCCAGTGACACAGTTTCTCCAACAAGGCTACACCCATTAAGGACA  48
        |||| ||| |||||||||  | |||||||||||| |||  | ||||| 
seq2  CCCCCCACAGAGACACAGTT--TTCAACAAGGCTACCCCCCAT-AGGAC-  46

seq1  CTCCATA-TGAGCATGTAGGGGAAATAAGAAGAAAGAACATATTTGTTCA  97
      |||||||  ||||||||| ||| ||| || ||| |     ||||||||||
seq2  CTCCATAGAGAGCATGTAAGGGGAATTAGGAGAGA----CTATTTGTTCA  92

seq1  GGTTTTCCTCTGACCTT-CACAT-GTGTGCTGTGATATTCCTCTTTCCTT  145
      ||||| | ||||||||| ||||| |||||||||||||||||||||  |||
seq2  GGTTTCCTTCTGACCTTCCACATGGTGTGCTGTGATATTCCTCTT--CTT  140

seq1  ATCCATAACATGCACAAAATACATTACTCTACAAAAACAATGCTTAGAAT  195
      |||||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCCAT-ACATGCACAAAATACATTACTCTAC-AAAACAATGCTTAGAAT  188

seq1  TCCGTTTATCCTCCACAGATATTGTAAAAATGAAGCAAAACAATCTATTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTTATCCTCCACAGATATTGTAAAAATGAAGCAAAACAATCTATTT  238

seq1  AGTAACTAATCAGGTATGAAAAATAATTGACAGTTTTATATACTATTATC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTAATCAGGTATGAAAAATAATTGACAGTTTTATATACTATTATC  288

seq1  CTGTGATAGTGTTGGATTCATTGAGATGCAGTGTGATATTATGCAGACCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATAGTGTTGGATTCATTGAGATGCAGTGTGATATTATGCAGACCT  338

seq1  TGTAATATGAATCTCTGCCTGAAATAGGGATGTGTATATATTAAATTATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATGAATCTCTGCCTGAAATAGGGATGTGTATATATTAAATTATT  388

seq1  TTAATAATAAAGCATTGCAATCCACCTGAATATGTACCACTGGACCAAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATAAAGCATTGCAATCCACCTGAATATGTACCACTGGACCAAGG  438

seq1  AAATATGTTAAGCATATTGTATAGAGAGGACGATAAACAATCTAATATTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTTAAGCATATTGTATAGAGAGGACGATAAACAATCTAATATTT  488

seq1  TCTCTGTGTGCACTCCTGGGATGCGGTGCATGCAATTGAAGGAGAGAATC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTGCACTCCTGGGATGCGGTGCATGCAATTGAAGGAGAGAATC  538

seq1  AGCTTTCATAACCCACACATGTGCCCAGGCACACATGTACTCATTCTCGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCATAACCCACACATGTGCCCAGGCACACATGTACTCATTCTCGC  588

seq1  TCTTTTACACTGTAGAGCTCTCATTCCCTCGCAATCAAATGTTATTTAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACACTGTAGAGCTCTCATTCCCTCGCAATCAAATGTTATTTAAG  638

seq1  GATGAGTATCAAATATGTCCTTTATGTATGTATTAAAATATACACAGGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTATCAAATATGTCCTTTATGTATGTATTAAAATATACACAGGCA  688

seq1  ATATAATAAGCTAAACATCTTTTGCCGAAACTTATTAGCTAGTACTCTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAAGCTAAACATCTTTTGCCGAAACTTATTAGCTAGTACTCTGA  738

seq1  TGTCCAAGAGAGTAGACGGTGACTTTCATCTGAGATATTGCTTCACATAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAGAGAGTAGACGGTGACTTTCATCTGAGATATTGCTTCACATAT  788

seq1  GTGCCTACTGTGTAGTTTTAGGAGACTTACCAGCATTTTGGCAGCACACC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACTGTGTAGTTTTAGGAGACTTACCAGCATTTTGGCAGCACACC  838

seq1  TCAGAGATCAATGCAGCAAATGTGTGAACATAAACTTTTCATCTCTTTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATCAATGCAGCAAATGTGTGAACATAAACTTTTCATCTCTTTTT  888

seq1  GGTGGTATTGCATTATTTTTCTTGGAAGGAAATATGGAAACATATTTTAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTATTGCATTATTTTTCTTGGAAGGAAATATGGAAACATATTTTAA  938

seq1  ATTCCCTGAAAATATTCATTGAATTCTGTCGAGAAATTCTAGTCTTGATT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGAAAATATTCATTGAATTCTGTCGAGAAATTCTAGTCTTGATT  988

seq1  TGTTTTTCCTAGAATAAACACAAGAATGTGACTGGACAGAATGTTACTTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCCTAGAATAAACACAAGAATGTGACTGGACAGAATGTTACTTA  1038

seq1  CTGAATATCAGCTAAGAGCACAGAATGGTACTTGAATCTGTAGTCTGGCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATCAGCTAAGAGCACAGAATGGTACTTGAATCTGTAGTCTGGCT  1088

seq1  TCAGCAATAGGTGTGTGGTATTGCTGTGTGGACAGTGCTGATGTAAGCAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAATAGGTGTGTGGTATTGCTGTGTGGACAGTGCTGATGTAAGCAT  1138

seq1  CTTACTTGCTATCTCTTTTAAGAATTC  1172
      |||||||||||||||||||||||||||
seq2  CTTACTTGCTATCTCTTTTAAGAATTC  1165


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