BAC Information

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BAC

Clone NameB6Ng01-166F11
Chromosome1 (Build37)
Map Location 12,676,795 - 12,677,625
singlet/doubletsinglet
Overlap geneLOC100039733
Upstream geneA830018L16Rik, LOC665262, LOC100039709, LOC621353
Downstream geneSulf1, Slco5a1, LOC383490, Prdm14, Ncoa2, LOC665341, LOC100039812, EG621685, Tram1, Lactb2, Xkr9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166F11.bB6Ng01-166F11.g
ACCDH958149DH958150
length523833
definitionDH958149|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F11, 5' end.DH958150|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
taaagatttaatttttgagacaaagcctcgctatgtagtagagattgccc
tgaaacatactaggtggtagcccaggctagcctcatttcaggctctggga
ttacagcatgtaccatgactcagctcagaagtggggaatcaacccggaca
ctattgcatatgtcagaaagattctgctgaagggaccctgttatagctgt
ctcgtatgaggctatgccagtgcctggcaaatatagaattggatgctcac
agtcagctattggatggaacacagggcccccaatcgaggaactagagaaa
gtacccaaggagctgaacgggtctgcaaccctataggaggaccaacaata
gaactaacttgtacccctggagctcgtgtctctagctgcatatgtagcag
aagatggcctagttggccatcattgggaaaagaggccccttggtcttgca
aactttatatgccccagtataggggaatgccagggctaagaagtgggagt
gggagggtaggggagcagggcag
gaattcatggtaagtcttctctcttcttttttttttttttttggtttttc
gagacagggtttctctgtatagctctggctgtcctggaactcactctgta
gaccaggctggcctcgaacacagaaatctgccttcctctgcctccgaagt
gctgggattaaaggcttgtaccaccatgcctggcttctcttttcttaatg
tggaaaaggcaggaaagttaagttgaaggagattaatgaatgccagaggc
tgggcagtcttgtgtgatttagaactgcaggctgttctagttgcaagact
taaagcacatctgtggacatattgcaatagatggcaatgggctaattgtt
atacatgtctctggtggcacgagactttacatgtcctttgccatttgctt
aacacacaaattttacggagtgctttcagcaaagccaagatgtcatcaat
ataaggagcatctcaggtatgcactgtgtctctatttcggatgctcagat
tacaggatatcattatatagcccagactgtcctgccatttgtatgtagtc
caggctagcctccaactcacacttttcttgtcctggtccccaaatgccat
atttggggtgaagctcattgttagaccactttcccagatgctgaggcctg
gatttgatgcacagaaatgtaagaagtagggggaagggtagaagagaaag
ggaaaagattgcattagatttgggtacattttatttctgataattcatgt
gtgcttatgtacatatggaggccaggcattgacactgggtatcttcctca
gttactttttctctttccttccctccctccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12676795_12677625
seq2: B6Ng01-166F11.g_66_898

seq1  GAATTCATGGTAAGTCTTCTCTCTTCTTTTTTTTTTTTTTTTGGTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTAAGTCTTCTCTCTTCTTTTTTTTTTTTTTTTGGTTTTTC  50

seq1  GAGACAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGAACTCACTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGAACTCACTCTGTA  100

seq1  GACCAGGCTGGCCTCGAACACAGAAATCTGCCTTCCTCTGCCTCCGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCTGGCCTCGAACACAGAAATCTGCCTTCCTCTGCCTCCGAAGT  150

seq1  GCTGGGATTAAAGGCTTGTACCACCATGCCTGGCTTCTCTTTTCTTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTAAAGGCTTGTACCACCATGCCTGGCTTCTCTTTTCTTAATG  200

seq1  TGGAAAAGGCAGGAAAGTTAAGTTGAAGGAGATTAATGAATGCCAGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGCAGGAAAGTTAAGTTGAAGGAGATTAATGAATGCCAGAGGC  250

seq1  TGGGCAGTCTTGTGTGATTTAGAACTGCAGGCTGTTCTAGTTGCAAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTCTTGTGTGATTTAGAACTGCAGGCTGTTCTAGTTGCAAGACT  300

seq1  TAAAGCACATCTGTGGACATATTGCAATAGATGGCAATGGGCTAATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCACATCTGTGGACATATTGCAATAGATGGCAATGGGCTAATTGTT  350

seq1  ATACATGTCTCTGGTGGCACGAGACTTTACATGTCCTTTGCCATTTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTCTCTGGTGGCACGAGACTTTACATGTCCTTTGCCATTTGCTT  400

seq1  AACACACAAATTTTACGGAGTGCTTTCAGCAAAGCCAAGATGTCATCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAAATTTTACGGAGTGCTTTCAGCAAAGCCAAGATGTCATCAAT  450

seq1  ATAAGGAGCATCTCAGGTATGCACTGTGTCTCTATTTCGGATGCTCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAGCATCTCAGGTATGCACTGTGTCTCTATTTCGGATGCTCAGAT  500

seq1  TACAGGATATCATTATATAGCCCAGACTGTCCTGCCATTTGTATGTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGATATCATTATATAGCCCAGACTGTCCTGCCATTTGTATGTAGTC  550

seq1  CAGGCTAGCCTCCAACTCACACTTTTCTTGTCCTGGTCCCCAAATGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGCCTCCAACTCACACTTTTCTTGTCCTGGTCCCCAAATGCCAT  600

seq1  ATTTGGGGTGAAGCTCATTGTTAGACCACTTTCCCAGATGCTGAGGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGTGAAGCTCATTGTTAGACCACTTTCCCAGATGCTGAGGCCTG  650

seq1  GATTTGATGCACAGAAATGTAAGAAGTAGGGGGAAGGGTAGAAGAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATGCACAGAAATGTAAGAAGTAGGGGGAAGGGTAGAAGAGAAAG  700

seq1  GGAAAAGATTGCATTAGATTTGGGTACATTTTATTTCTGATAATTCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGATTGCATTAGATTTGGGTACATTTTATTTCTGATAATTCATGT  750

seq1  GTGCTTATGTACATATGGAGGCCAGGCATTGACACTGGGTATCTTCCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATGTACATATGGAGGCCAGGCATTGACACTGGGTATCTTCCTCA  800

seq1  GTTAC-TTTTCTC-TTCCTTCCCTCCCTCCCTC  831
      ||||| ||||||| |||||||||||||||||||
seq2  GTTACTTTTTCTCTTTCCTTCCCTCCCTCCCTC  833