BAC Information

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BAC

Clone NameB6Ng01-166P07
Chromosome1 (Build37)
Map Location 188,160,999 - 188,249,853
singlet/doubletdoublet
Overlap genenone
Upstream geneBpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik, LOC677785, Lyplal1
Downstream geneTgfb2, Rrp15, LOC666832, LOC100042375, D1Pas1, Spata17, Gpatch2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166P07.bB6Ng01-166P07.g
ACCDH958586DH958587
length6331,186
definitionDH958586|Mus musculus domesticus DNA, BAC clone: B6Ng01-166P07, 5' end.DH958587|Mus musculus domesticus DNA, BAC clone: B6Ng01-166P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(188,160,999 - 188,161,631)(188,248,658 - 188,249,853)
sequence
gaattctctcatattagttacctggtaccgactacatacctttaaagcag
tgactaagttgaaataattcattactatttgaaagttcgaaccaagttca
tcaacctaatcaaacattccaggttaactataagaaaaagaaaaaagcaa
ttctagacgactaaagaacaaattgaggtgctttaggagtccctggctca
cccctgaaggaggtatgtgtagctttcctgtttcagctttccaagtgctg
caattacaatgtatgctatcatacagtttatgtggtttgaaaaataagtt
ctttccaccctttctccctcccacattcccttcctccatctgtctgtctg
ttatcaactgtatcatcacaaaaacagaaccattagtgggaaagccagcc
accaaagcattgcttccacataaagttagtcatgtttgtttgcagatttg
tgccacagatattagtgttcccgtggtcaaaatcccaatgagggaaaaaa
aaaaatccagggaggcaggaacaaattaaaagtggcactgatctcagtgg
caggcaccaggtagggtgaggtgacttttcaaacacttttagttctctgg
taaagcagcaggggtagggttggggggtgaggg
gaattctttgtaattcttatcttgagagggacagaggtaggtaaagatac
tgattaatttgtctgtgataaatgccaaccaatcaatggccgcatttaaa
ctgtttcgtctcccggaaaatacgagaatcgtagaaatgaagaggaaaag
gcaggagcgaagtgtgagaagcagagaccggagaggcacaaagggaaagg
ggaaaataaaagccagtcacagtgatgacatcacctctgttttaaaactg
agctgtgcatctgtaggagtcatttctgctctgtctcaggaggggaaacg
tgctgagctcctggggctgctgcctgacaggtctaccagatggaccctgg
ctctggcagctgggctgaagcactccactcagggtttaagattcagcaat
gtattattaaacctgtgtgtaacacaatgtgcaagatgacatcatgtccc
cgggtgtgtgtgacctcaccaaaaatatgtgccctgctgtggaagaagaa
tagaattccaagatagcaaaagccaggcagaaatttgagcaacttacgac
tgcgtactttcttctatccagcctccagcactgttagccttcctacaaac
aaacaaaaagcaattattgtgtgcaatttcacatcaaaaaatgtaatgta
aaaaagttcagagctaagcatctattgtgaatgttaaatggagacggcct
taggagcctggcacctcagctataatctgcagaggagcacagtaattggg
gaagtaggacatgcttttactcaccattagacaagagtgaccttgagtgc
tgattgccttgtctctacctcctgagcgctacaattataagcttgttcca
ccacacctggtgtctgcagtgctgggggtcaaccccaaggcttcatgcag
gccgtgtatgcactctaccaaccgagctacatcagctatagctcttgcac
tggtagacagttagagtgtggaagggacaggaagcacccagaaatcaaca
gagtcaggaagaccctactatctataagctggtcacagaagcttggggag
ctaatgaggcagttgaagagctgtagctggtggcctggggcatcactgga
gtcgaaagacaagcatatttcatttggcttcattggccatcctgttagga
acttccacctcttcataggtccggttcagctgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_188160999_188161631
seq2: B6Ng01-166P07.b_45_677

seq1  GAATTCTCTCATATTAGTTACCTGGTACCGACTACATACCTTTAAAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCATATTAGTTACCTGGTACCGACTACATACCTTTAAAGCAG  50

seq1  TGACTAAGTTGAAATAATTCATTACTATTTGAAAGTTCGAACCAAGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAGTTGAAATAATTCATTACTATTTGAAAGTTCGAACCAAGTTCA  100

seq1  TCAACCTAATCAAACATTCCAGGTTAACTATAAGAAAAAGAAAAAAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTAATCAAACATTCCAGGTTAACTATAAGAAAAAGAAAAAAGCAA  150

seq1  TTCTAGACGACTAAAGAACAAATTGAGGTGCTTTAGGAGTCCCTGGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACGACTAAAGAACAAATTGAGGTGCTTTAGGAGTCCCTGGCTCA  200

seq1  CCCCTGAAGGAGGTATGTGTAGCTTTCCTGTTTCAGCTTTCCAAGTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAAGGAGGTATGTGTAGCTTTCCTGTTTCAGCTTTCCAAGTGCTG  250

seq1  CAATTACAATGTATGCTATCATACAGTTTATGTGGTTTGAAAAATAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACAATGTATGCTATCATACAGTTTATGTGGTTTGAAAAATAAGTT  300

seq1  CTTTCCACCCTTTCTCCCTCCCACATTCCCTTCCTCCATCTGTCTGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCACCCTTTCTCCCTCCCACATTCCCTTCCTCCATCTGTCTGTCTG  350

seq1  TTATCAACTGTATCATCACAAAAACAGAACCATTAGTGGGAAAGCCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTGTATCATCACAAAAACAGAACCATTAGTGGGAAAGCCAGCC  400

seq1  ACCAAAGCATTGCTTCCACATAAAGTTAGTCATGTTTGTTTGCAGATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCATTGCTTCCACATAAAGTTAGTCATGTTTGTTTGCAGATTTG  450

seq1  TGCCACAGATATTAGTGTTCCCGTGGTCAAAATCCCAATGAGGGAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGATATTAGTGTTCCCGTGGTCAAAATCCCAATGAGGGAAAAAA  500

seq1  AAAAATCCAGGGAGGCAGGAACAAATTAAAAGTGGCACTGATCTCAGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCAGGGAGGCAGGAACAAATTAAAAGTGGCACTGATCTCAGTGG  550

seq1  CAGGCACCAGGTAGGGTGAGGTGACTTTTCAAACACTTTTAGTTCTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACCAGGTAGGGTGAGGTGACTTTTCAAACACTTTTAGTTCTCTGG  600

seq1  TAAAGCAGCAGGGGTAGGGTTGGGGGGTGAGGG  633
      |||||||||||||||||||||||||||||||||
seq2  TAAAGCAGCAGGGGTAGGGTTGGGGGGTGAGGG  633

seq1: chr1_188248658_188249853
seq2: B6Ng01-166P07.g_65_1250 (reverse)

seq1  CACACAGCTGGAAAGGGAACCTATGAAGAGGTTGGAAGTACTATACAGGA  50
      ||||||||||  ||  | ||||||||||||| ||||||| |   ||||||
seq2  CACACAGCTG--AACCGGACCTATGAAGAGG-TGGAAGTTCCTAACAGGA  47

seq1  TGGGGCAAATGAAAGCAAATGAAATATGCTTGTCTTTTCGACTCCAGTGA  100
      |  ||| ||||||  ||||||||||||||||||| |||||||||||||||
seq2  T--GGCCAATGAAGCCAAATGAAATATGCTTGTC-TTTCGACTCCAGTGA  94

seq1  TGCCCCAGGCCA-CAGCTACAGCTCTTCCAACTGCCTCATTAGCTCCCCA  149
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  TGCCCCAGGCCACCAGCTACAGCTCTT-CAACTGCCTCATTAGCTCCCCA  143

seq1  AGCTTCCTGTGACCAGCTTATAGATAGTAGGGTCTTCCTGACTCTGTTGA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTT-CTGTGACCAGCTTATAGATAGTAGGGTCTTCCTGACTCTGTTGA  192

seq1  TTTCTGGGTTGCTTCCTTGTCCC-TCCACACCTCTAACTGTCTACCCAGT  248
      |||||||| ||||||| |||||| |||||| ||||||||||||| |||||
seq2  TTTCTGGG-TGCTTCC-TGTCCCTTCCACA-CTCTAACTGTCTA-CCAGT  238

seq1  GCAAGAGCTATAGCTGATGTAGCTCGGTTGGTAGAGTGCATACACGGCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGCTATAGCTGATGTAGCTCGGTTGGTAGAGTGCATACACGGCCT  288

seq1  GCATGAAGCCTTGGGGTTGACCCCCAGCACTGCAGACACCAGGTGTGGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGCCTTGGGGTTGACCCCCAGCACTGCAGACACCAGGTGTGGTG  338

seq1  GAACAAGCTTATAATTGTAGCGCTCAGGAGGTAGAGACAAGGCAATCAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCTTATAATTGTAGCGCTCAGGAGGTAGAGACAAGGCAATCAGC  388

seq1  ACTCAAGGTCACTCTTGTCTAATGGTGAGTAAAAGCATGTCCTACTTCCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGGTCACTCTTGTCTAATGGTGAGTAAAAGCATGTCCTACTTCCC  438

seq1  CAATTACTGTGCTCCTCTGCAGATTATAGCTGAGGTGCCAGGCTCCTAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACTGTGCTCCTCTGCAGATTATAGCTGAGGTGCCAGGCTCCTAAG  488

seq1  GCCGTCTCCATTTAACATTCACAATAGATGCTTAGCTCTGAACTTTTTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCTCCATTTAACATTCACAATAGATGCTTAGCTCTGAACTTTTTTA  538

seq1  CATTACATTTTTTGATGTGAAATTGCACACAATAATTGCTTTTTGTTTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACATTTTTTGATGTGAAATTGCACACAATAATTGCTTTTTGTTTGT  588

seq1  TTGTAGGAAGGCTAACAGTGCTGGAGGCTGGATAGAAGAAAGTACGCAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGAAGGCTAACAGTGCTGGAGGCTGGATAGAAGAAAGTACGCAGT  638

seq1  CGTAAGTTGCTCAAATTTCTGCCTGGCTTTTGCTATCTTGGAATTCTATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAGTTGCTCAAATTTCTGCCTGGCTTTTGCTATCTTGGAATTCTATT  688

seq1  CTTCTTCCACAGCAGGGCACATATTTTTGGTGAGGTCACACACACCCGGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCACAGCAGGGCACATATTTTTGGTGAGGTCACACACACCCGGG  738

seq1  GACATGATGTCATCTTGCACATTGTGTTACACACAGGTTTAATAATACAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGATGTCATCTTGCACATTGTGTTACACACAGGTTTAATAATACAT  788

seq1  TGCTGAATCTTAAACCCTGAGTGGAGTGCTTCAGCCCAGCTGCCAGAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATCTTAAACCCTGAGTGGAGTGCTTCAGCCCAGCTGCCAGAGCC  838

seq1  AGGGTCCATCTGGTAGACCTGTCAGGCAGCAGCCCCAGGAGCTCAGCACG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCATCTGGTAGACCTGTCAGGCAGCAGCCCCAGGAGCTCAGCACG  888

seq1  TTTCCCCTCCTGAGACAGAGCAGAAATGACTCCTACAGATGCACAGCTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTCCTGAGACAGAGCAGAAATGACTCCTACAGATGCACAGCTCA  938

seq1  GTTTTAAAACAGAGGTGATGTCATCACTGTGACTGGCTTTTATTTTCCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAACAGAGGTGATGTCATCACTGTGACTGGCTTTTATTTTCCCC  988

seq1  TTTCCCTTTGTGCCTCTCCGGTCTCTGCTTCTCACACTTCGCTCCTGCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTGTGCCTCTCCGGTCTCTGCTTCTCACACTTCGCTCCTGCCT  1038

seq1  TTTCCTCTTCATTTCTACGATTCTCGTATTTTCCGGGAGACGAAACAGTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTCATTTCTACGATTCTCGTATTTTCCGGGAGACGAAACAGTT  1088

seq1  TAAATGCGGCCATTGATTGGTTGGCATTTATCACAGACAAATTAATCAGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCGGCCATTGATTGGTTGGCATTTATCACAGACAAATTAATCAGT  1138

seq1  ATCTTTACCTACCTCTGTCCCTCTCAAGATAAGAATTACAAAGAATTC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTACCTACCTCTGTCCCTCTCAAGATAAGAATTACAAAGAATTC  1186