BAC Information

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BAC

Clone NameB6Ng01-167N14
Chromosome1 (Build37)
Map Location 158,410,478 - 158,411,627
singlet/doubletsinglet
Overlap genenone
Upstream geneAcbd6, Lhx4, Qscn6, Cep350, LOC676894, Tor1aip1, Ifrg15, Tor1aip2, A230106N23Rik, Tdrd5, Nphs2, 9430070O13Rik, LOC100038991, Soat1
Downstream geneLOC100039026, Abl2, Tor3a, C530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167N14.bB6Ng01-167N14.g
ACCDH959239DH959240
length1,1321,176
definitionDH959239|Mus musculus domesticus DNA, BAC clone: B6Ng01-167N14, 5' end.DH959240|Mus musculus domesticus DNA, BAC clone: B6Ng01-167N14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatatatgtatgtttgggcaacttaatggaagggacttgctt
tcttttcataacccaatggggatttttcaattccacgaagaaagcttaag
caaatatcaaattataagagcaggaaaaaaggtcccagaaatggtaccat
tctgagatgaccatttttaacactctagtctttgttttacctctttgcat
atgatactttacacaccttaggtatgtacaaatgttgccatttttttcat
tgattcccccccccccctattttcctgtgtgtggtattctgtgggtgcac
atgtgtggtgtgattaatacagtatgagtgtgtgcatgtggaggtcagag
gttaatgtcagggaccatcctctgaactttgcttaagaaggcagggtctc
tcaatcaaatccagagtttctgaatgtggctaatctggtttgctttgggg
accccttatctttgtcttctgagagtgaattacaggaggaagggtgtcag
gtccaactatctttatgcagccactgagactctggtccttataactgagt
ggttaatacccagtcagagacattgcttagaccctgataatttccttggc
tttttgttgttgtttatttgttgaacaggctttctctgtgtagtcctgga
actggctctgtagactaggctagcctcaaactcagagatcttctttgcct
ctgcctcctgagttgctgggattaaggcatgggtctccatgcctggcttt
cttgattctttttgaaagatttctttttaagttttaattacgtgaatgca
gaagtgctgtgcatggggtatgtgcactcgagtgctggtgtccacagagg
ctggaggccatcagatccctaggagctggaatttcatatactatgaacca
ccttaacatgggctgaagcatctctccagccacagatataaactcaggtt
tgatagataggaaagcagattcagagatgccctatagcctctccctcctc
cgtgtataccttcttcttatcaaatcccctctagtgtacacgtgtcaata
ataccagactattgtactgctgctttgtgtgtcactgaacacaagctgaa
gtatcccaagaaaggagttcagtgggaagtgc
gaattctcacctttaggaataccgaatggctaagaagcacctgaaaaaat
gttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
tttcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcaaggatgtggagaaagaagaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctc
agaaaactggatatagtactaccagaggatcctgcaatacctctcctggg
catatattcagaagatattccaaccggtaagaaggacacatcctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgtccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacccaatcacaa
aagaattcacatgatatgtactcactgataagtggatattagcccagaaa
cttagaatacccaagatataggataaaatttgcgaagcacatgagacttg
ggaggaataaagaccagggtgtggacgctttgccccttcttagaatgggg
agcggaatgtccatggagggagttgcagagacgaagtttggagctgagac
gaaggggtggaccatatagagactgccatatagggaatccatcccataat
cagcctccaaacactgacaccattgcatacactagcgggattttgctgaa
aggaccctgatatagctgtctcttgtgagactatgctggggcctggcaac
acagaagtggatgctcaaagtcagctattggatggatcacagggccccaa
tggaggagctagagacagtacacaagttgctgaggggaactgcaccctat
gggtggaacaacaatatgactaccagtgacccctggagcttgtgttctct
agctgcatatgttatcgagatggcctggtcggccatcagttgaagagagg
tcaatgtcgtgcaaactatatgcctcagtcaggggaacgccaggccggga
agtgtggagatggggtgcggatcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_158410478_158411627
seq2: B6Ng01-167N14.b_45_1176 (reverse)

seq1  GCACTTCCCCAACTGAAACTCCTTTCTCTGTGATAACTCCAGCTTGTGTC  50
      |||||||||  |||| ||||||||||| || ||| ||| |||||||||| 
seq2  GCACTTCCC--ACTG-AACTCCTTTCT-TGGGAT-ACTTCAGCTTGTGTT  45

seq1  AAGTTGACACACAAAAGCAGCCAGTACAATGTGTCTGTGTATTATTTGAC  100
       || |||||||| ||||||| |||||||||  ||||| |||||| |||||
seq2  CAG-TGACACAC-AAAGCAG-CAGTACAAT-AGTCTG-GTATTA-TTGAC  89

seq1  ACGGTGTACCACTAGAGGGGATTTTGATAAGGAGAGGGTTATACACGGGA  150
      || ||||| |||||||||||| ||||||||| ||| || ||||||| |||
seq2  AC-GTGTA-CACTAGAGGGGA-TTTGATAAGAAGAAGG-TATACAC-GGA  134

seq1  GGAGGGAAGAGGGCTATAGGGCATCTCTGAATTCTGCTTTCCTATCTATC  200
      |||||| ||| |||||||||||||||||||| ||||||||||||||||||
seq2  GGAGGG-AGA-GGCTATAGGGCATCTCTGAA-TCTGCTTTCCTATCTATC  181

seq1  AAACCTGAGTTTATAATCTGTGGCTGGAGAGATGCTTCAGCCCATGTT-A  249
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  AAACCTGAGTTTAT-ATCTGTGGCTGGAGAGATGCTTCAGCCCATGTTAA  230

seq1  GGTGGTTCATAGTATATGAAATTCCAGCTCCTAGGGATCTGATGGCCTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTCATAGTATATGAAATTCCAGCTCCTAGGGATCTGATGGCCTCC  280

seq1  AGCCTCTGTGGACACCAGCACTCGAGTGCACATA-CCCATGCACAGCACT  348
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCCTCTGTGGACACCAGCACTCGAGTGCACATACCCCATGCACAGCACT  330

seq1  TCTGCATTCACGTAATTAAAACTTAAAAAGAAATCTTTCAAAAAGAATCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTCACGTAATTAAAACTTAAAAAGAAATCTTTCAAAAAGAATCA  380

seq1  AGAAAGCCAGGCATGGAGACCCATGCCTTAATCCCAGCAACTCAGGAGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCAGGCATGGAGACCCATGCCTTAATCCCAGCAACTCAGGAGGC  430

seq1  AGAGGCAAAGAAGATCTCTGAGTTTGAGGCTAGCCTAGTCTACAGAGCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAAAGAAGATCTCTGAGTTTGAGGCTAGCCTAGTCTACAGAGCCA  480

seq1  GTTCCAGGACTACACAGAGAAAGCCTGTTCAACAAATAAACAACAACAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGACTACACAGAGAAAGCCTGTTCAACAAATAAACAACAACAAA  530

seq1  AAGCCAAGGAAATTATCAGGGTCTAAGCAATGTCTCTGACTGGGTATTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAGGAAATTATCAGGGTCTAAGCAATGTCTCTGACTGGGTATTAA  580

seq1  CCACTCAGTTATAAGGACCAGAGTCTCAGTGGCTGCATAAAGATAGTTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGTTATAAGGACCAGAGTCTCAGTGGCTGCATAAAGATAGTTGG  630

seq1  ACCTGACACCCTTCCTCCTGTAATTCACTCTCAGAAGACAAAGATAAGGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACACCCTTCCTCCTGTAATTCACTCTCAGAAGACAAAGATAAGGG  680

seq1  GTCCCCAAAGCAAACCAGATTAGCCACATTCAGAAACTCTGGATTTGATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAAAGCAAACCAGATTAGCCACATTCAGAAACTCTGGATTTGATT  730

seq1  GAGAGACCCTGCCTTCTTAAGCAAAGTTCAGAGGATGGTCCCTGACATTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACCCTGCCTTCTTAAGCAAAGTTCAGAGGATGGTCCCTGACATTA  780

seq1  ACCTCTGACCTCCACATGCACACACTCATACTGTATTAATCACACCACAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGACCTCCACATGCACACACTCATACTGTATTAATCACACCACAC  830

seq1  ATGTGCACCCACAGAATACCACACACAGGAAAATAGGGGGGGGGGGGAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACCCACAGAATACCACACACAGGAAAATAGGGGGGGGGGGGAAT  880

seq1  CAATGAAAAAAATGGCAACATTTGTACATACCTAAGGTGTGTAAAGTATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAAAAATGGCAACATTTGTACATACCTAAGGTGTGTAAAGTATC  930

seq1  ATATGCAAAGAGGTAAAACAAAGACTAGAGTGTTAAAAATGGTCATCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAAGAGGTAAAACAAAGACTAGAGTGTTAAAAATGGTCATCTCA  980

seq1  GAATGGTACCATTTCTGGGACCTTTTTTCCTGCTCTTATAATTTGATATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTACCATTTCTGGGACCTTTTTTCCTGCTCTTATAATTTGATATT  1030

seq1  TGCTTAAGCTTTCTTCGTGGAATTGAAAAATCCCCATTGGGTTATGAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGCTTTCTTCGTGGAATTGAAAAATCCCCATTGGGTTATGAAAA  1080

seq1  GAAAGCAAGTCCCTTCCATTAAGTTGCCCAAACATACATATATTAAGAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAGTCCCTTCCATTAAGTTGCCCAAACATACATATATTAAGAAT  1130

seq1  TC  1150
      ||
seq2  TC  1132