BAC Information

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BAC

Clone NameB6Ng01-168G03
Chromosome1 (Build37)
Map Location 36,904,202 - 37,060,476
singlet/doubletdoublet
Overlap geneTmem131, EG241053
Upstream geneLOC666283, LOC100041091, EG666290, Hs6st1, Ugcgl1, LOC100041123, Lincr, Arid5a, 4632411B12Rik, 4930533C12Rik, Lman2l, Cnnm4, Cnnm3, Ankrd23, Ankrd39, Sema4c, 1700024G10Rik, BC050210, EG623414, Cox5b, Actr1b, 4933424G06Rik, Zap70
Downstream geneA230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168G03.bB6Ng01-168G03.g
ACCDH959635DH959636
length6371,067
definitionDH959635|Mus musculus domesticus DNA, BAC clone: B6Ng01-168G03, 5' end.DH959636|Mus musculus domesticus DNA, BAC clone: B6Ng01-168G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,059,943 - 37,060,476)(36,904,202 - 36,905,269)
sequence
gaattcttgtctacatcatacgctttgtcctctgtcccctagcctgtagt
tattagagtgagattatgtgacatcaaatgccgctgcattggtggctggg
cccagcagacagcttccagatgattccagaatgtcctccattgcttctgt
tgggtgatcactgaaataaaagcacaagagtttaatattttctcctaagt
gccaggcggtggtagcacacctttagtcccagcactcaggagacagaagc
attcagatttctgagttcaaggccagcctggtctacagaatcttgtcaga
gttgtctctctcctttcattaggtgatagatcagttcaatctaggcatat
agcttatgaatataactgggttatgtattttttatacaggcttattggga
taagaaattacctgggctggagagatggctcagcggttaagagcactgac
tgctcttccagaagtccagagttcaattcccagcaaacacatggtggctc
acgaccatctgtaatgggatccgatgccctcctctggtgtgtctgaagac
agctacagtgtactcatataaataagatgtataaatgtttaaaaaaaaaa
gggggaaggaaggaagggacggagggagggatggagg
gaattcagagcaaagatacagaatgcgccgaagggagaagcccacacgtt
tacaaagtgagactcaccagagcaagctctggctctggcttcagcgactc
tgtgctgagaaaagcctgggccagacacttcaacctgtaaagcactcagc
tgccaaccaagatgatcatgttcagcacagctcttttaaaagctctggag
aaatcaggacatttcgagacaagcacaaacgagccatcagcacaggagtg
cttcagaaagaacgctctgtacagaaagggaagaaagtctaacacactgt
agtctaaagagcataaactccatgaggggaacggatgataggggcgatca
aggaagaactctgccatagctagcctgtcactcagaaaactctcaatact
agcaggaaacaaaaccacacaacaatccccatgatagctcccaatagcaa
ccttaaatgttaatggcttcaatgtgtcaataaaaggactcagatgggct
gagttggaaaaaaaaaaactgactatatgttgtctctaagaaatatacat
acctaactggaagacactcaaaaagtaaatttatcacccaaacagaagct
gatgtagttattttgatatgtgatagagttccaaataaaagatataattc
atcaagatacaacaattttaagtaataatgtaccccattttggtgctcct
ggtttcataaaacaaacactagtgggcacaaaaggttagtcagatcctga
cacaaagagtgggtaaccttcaaatcccattttcttacttatgtatttat
ttgatgtgaataggtgttttgcctgcatgtatgtctgtgcactaacctgt
atgcagtgtccacagagcccagaagagggcgttagtctgcctttgggact
ggagttacagatagctctgagttgacatgccactgggaactgaccccagg
ttcttgggaaatgcagcaagtgctcttacccagtatcatctctttagcat
actctgtcccccaccccactcccttttttgttgttccttactgttgtttg
ggtttttggaagacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37059943_37060476
seq2: B6Ng01-168G03.b_149_682 (reverse)

seq1  CCTCCATCCCTCCCTCCGTCCCTTCCTTCCTTCCCCCTTTTTTTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCCCTCCCTCCGTCCCTTCCTTCCTTCCCCCTTTTTTTTTTAAA  50

seq1  CATTTATACATCTTATTTATATGAGTACACTGTAGCTGTCTTCAGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATACATCTTATTTATATGAGTACACTGTAGCTGTCTTCAGACACA  100

seq1  CCAGAGGAGGGCATCGGATCCCATTACAGATGGTCGTGAGCCACCATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGAGGGCATCGGATCCCATTACAGATGGTCGTGAGCCACCATGTG  150

seq1  TTTGCTGGGAATTGAACTCTGGACTTCTGGAAGAGCAGTCAGTGCTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGGAATTGAACTCTGGACTTCTGGAAGAGCAGTCAGTGCTCTTA  200

seq1  ACCGCTGAGCCATCTCTCCAGCCCAGGTAATTTCTTATCCCAATAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTGAGCCATCTCTCCAGCCCAGGTAATTTCTTATCCCAATAAGCCT  250

seq1  GTATAAAAAATACATAACCCAGTTATATTCATAAGCTATATGCCTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAAAATACATAACCCAGTTATATTCATAAGCTATATGCCTAGATT  300

seq1  GAACTGATCTATCACCTAATGAAAGGAGAGAGACAACTCTGACAAGATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGATCTATCACCTAATGAAAGGAGAGAGACAACTCTGACAAGATTC  350

seq1  TGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGAATGCTTCTGTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGAATGCTTCTGTCTCCT  400

seq1  GAGTGCTGGGACTAAAGGTGTGCTACCACCGCCTGGCACTTAGGAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGGACTAAAGGTGTGCTACCACCGCCTGGCACTTAGGAGAAAA  450

seq1  TATTAAACTCTTGTGCTTTTATTTCAGTGATCACCCAACAGAAGCAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAACTCTTGTGCTTTTATTTCAGTGATCACCCAACAGAAGCAATGG  500

seq1  AGGACATTCTGGAATCATCTGGAAGCTGTCTGCT  534
      ||||||||||||||||||||||||||||||||||
seq2  AGGACATTCTGGAATCATCTGGAAGCTGTCTGCT  534

seq1: chr1_36904202_36905269
seq2: B6Ng01-168G03.g_67_1133

seq1  GAATTCAGAGCAAAGATACAGAATGCGCCGAAGGGAGAAGCCCACACGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCAAAGATACAGAATGCGCCGAAGGGAGAAGCCCACACGTT  50

seq1  TACAAAGTGAGACTCACCAGAGCAAGCTCTGGCTCTGGCTTCAGCGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTGAGACTCACCAGAGCAAGCTCTGGCTCTGGCTTCAGCGACTC  100

seq1  TGTGCTGAGAAAAGCCTGGGCCAGACACTTCAACCTGTAAAGCACTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGAGAAAAGCCTGGGCCAGACACTTCAACCTGTAAAGCACTCAGC  150

seq1  TGCCAACCAAGATGATCATGTTCAGCACAGCTCTTTTAAAAGCTCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACCAAGATGATCATGTTCAGCACAGCTCTTTTAAAAGCTCTGGAG  200

seq1  AAATCAGGACATTTCGAGACAAGCACAAACGAGCCATCAGCACAGGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGACATTTCGAGACAAGCACAAACGAGCCATCAGCACAGGAGTG  250

seq1  CTTCAGAAAGAACGCTCTGTACAGAAAGGGAAGAAAGTCTAACACACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAAGAACGCTCTGTACAGAAAGGGAAGAAAGTCTAACACACTGT  300

seq1  AGTCTAAAGAGCATAAACTCCATGAGGGGAACGGATGATAGGGGCGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAGAGCATAAACTCCATGAGGGGAACGGATGATAGGGGCGATCA  350

seq1  AGGAAGAACTCTGCCATAGCTAGCCTGTCACTCAGAAAACTCTCAATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAACTCTGCCATAGCTAGCCTGTCACTCAGAAAACTCTCAATACT  400

seq1  AGCAGGAAACAAAACCACACAACAATCCCCATGATAGCTCCCAATAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAAACAAAACCACACAACAATCCCCATGATAGCTCCCAATAGCAA  450

seq1  CCTTAAATGTTAATGGCTTCAATGTGTCAATAAAAGGACTCAGATGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATGTTAATGGCTTCAATGTGTCAATAAAAGGACTCAGATGGGCT  500

seq1  GAGTTGGAAAAAAAAAAACTGACTATATGTTGTCTCTAAGAAATATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGAAAAAAAAAAACTGACTATATGTTGTCTCTAAGAAATATACAT  550

seq1  ACCTAACTGGAAGACACTCAAAAAGTAAATTTATCACCCAAACAGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACTGGAAGACACTCAAAAAGTAAATTTATCACCCAAACAGAAGCT  600

seq1  GATGTAGTTATTTTGATATGTGATAGAGTTCCAAATAAAAGATATAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGTTATTTTGATATGTGATAGAGTTCCAAATAAAAGATATAATTC  650

seq1  ATCAAGATACAACAATTTTAAGTAATAATGTACCCCATTTTGGTGCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGATACAACAATTTTAAGTAATAATGTACCCCATTTTGGTGCTCCT  700

seq1  GGTTTCATAAAACAAACACTAGTGGGCAC-AAAGGTTAGTCAGATCCTGA  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTTTCATAAAACAAACACTAGTGGGCACAAAAGGTTAGTCAGATCCTGA  750

seq1  CACAAAGAGTGGGTAACCTTCAAATCCCATTTTCTTACTTATGTATTTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGAGTGGGTAACCTTCAAATCCCATTTTCTTACTTATGTATTTAT  800

seq1  TTGATGTGAATAGGTGTTTTGCCTGCATGTATGTCTGTGCACTAACCTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGAATAGGTGTTTTGCCTGCATGTATGTCTGTGCACTAACCTGT  850

seq1  ATGCAGTGTCCACAGAGCCCAGAAGAGGGCGTTAGTCTGCCTTTGGGACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTGTCCACAGAGCCCAGAAGAGGGCGTTAGTCTGCCTTTGGGACT  900

seq1  GGAGTTACAGATAGCTCTGAGTTGACATGCCACTGGGAACTGACCCCAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTACAGATAGCTCTGAGTTGACATGCCACTGGGAACTGACCCCAGG  950

seq1  TTCTTGGGAAATGCAGCAAGTGCTCTTACCCAGTATCATCTCTTTAGCAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCTTGGGAAATGCAGCAAGTGCTCTTACCCAGTATCATCTCTTTAGCA-  999

seq1  TACTCTGTCCCCCCACCCCCACTCCCCTTTTTTGTTGTTCCTTACTGTTG  1049
      |||||||||||||   ||||||| ||||||||||||||||||||||||||
seq2  TACTCTGTCCCCC--ACCCCACT-CCCTTTTTTGTTGTTCCTTACTGTTG  1046

seq1  TTTGGGTTTTTG--AGACAGG  1068
      ||||||||||||  |||||||
seq2  TTTGGGTTTTTGGAAGACAGG  1067