BAC Information

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BAC

Clone NameB6Ng01-168H05
Chromosome1 (Build37)
Map Location 47,739,466 - 47,740,333
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc39a10, EG227061, LOC666869
Downstream geneLOC546734, LOC674566, LOC100041936
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168H05.bB6Ng01-168H05.g
ACCDH959685DH959686
length1,2651,101
definitionDH959685|Mus musculus domesticus DNA, BAC clone: B6Ng01-168H05, 5' end.DH959686|Mus musculus domesticus DNA, BAC clone: B6Ng01-168H05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagactttcatcctgaatgggtgttggattttg
tcaaatgctttctcctcatctgaggaaatgatcatgtggtttttgtcttt
gagtttgttaatataatgggttacattgatggatttccatatattaaacc
atccctgcatccctggaataaaacctacttggtcagggtggatgattgtt
ttaatgtgttcttggacttatagcaagaattttattgagtatttttgcat
cgatattcctaagggaaattggtctgaatttctctatctttgttggatct
ttctgtggtttaggtatcacaataattgtggcttcatagaatgagttggg
tagaggaccatctacttctattttgtggaatagattttgcagaactggaa
ttagatcttctttgaaggcctgatagaactctgcactaaacccatctggt
cctgggctttttttggttgggaaaccattattgaatgcttctattccttt
agggaatatgtgactgttcagatcattaacttgatcctggtttacctttg
gtacttggtatctgtctataacttagtccatttcgttcaggttttccagt
tttgttgagtattgccattgtagaaggatctgatggtgttttggatttct
tcagggtctgttcttatgtctcccttttcatttctgattttgttaattag
gatgctgtccctgtaccctctagtgagtctggctaagggtttatctatct
tttgattttctcaaagaaccagctcctcctttggtttattctttgaatag
ttcttcttatttccacttggttgatttcgcccctatgtttgattatttcc
ttctgtctactactctttggtgaattttcttccttttttctagagctttt
agatgtgttgtcaaggtgctagtatgtcctctctctagtttctttttgga
ggcactcagagctatgagtttccctctagaatcctttcaaagtggtccca
taagtttggctatgttgtggcttcatttcataaacttctaaaagtcttaa
tttctttctttatttcttcttgacaaggtatcattggagagatgttgtca
ttcccaaatgatgttgcctttcatatttatgttgtatggaagtacagcct
agtccaggcggctgaaggaggcctgtgtactattaaaattttgtactgtg
aacctgtttggacaaatatgccactactgaaaggcatactgatgactatc
agtatagaaattcat
gaattctctaaagaggagtggaagagtagaaacattagaaaatttggtta
gacttaagaaagctaactttagggactgttatccagtctctgcatgtttg
gaaggttcagagcttgactgaagttctttctttctgaaaggttggatgag
gcaagatgacctgaaatcagctgccatcccacaaggtgttttgggcagca
actctaagcaggaggccaagcaaatctgttcagcatctctgagaatgaat
cttgccaaagctgtacattattgaatatatgaatctcacaactaaattta
gtaccattaagatattaatatgaattgggcagggttcacatttcagttaa
ggatgaaattttgctccttgtttgagcaggttaaagatagctgtcttttt
aatgagttaattttatcaataaccaattgtaataagtcttcatttatgcc
atgtgaaggatgatatgacgaatttttacctgtcttctttgattttctca
aacttttcgagtccttcaggagggtctttccctgtcatctttgatgcata
tgactctagataggcttcaaagccctctctagtttcctgttaacataaac
tcagagttctctcccaaaataacatgtacttggttcagtaactgcaaata
attaaatgtttatcttaaggaatttctatacgaattttaatataaccact
aaactcataatcacactcattttgataattaaaacaattcaaagtaatat
ttaagatggaatgcctcaatatttctatttctctataattaacttaatta
aattccctccttcttactgtatcactctcccctatattctctcttctgtg
gagcttaagatctgtatgtttaagtacatttaaagaattactataatatt
tttttctgtccttaaacacagttaaatcaaattttaaaatctttcctttg
atacttttctggctagagacaggcagctttattatttgttctctctctct
ctcttttatggaaatttatttatttacatttcaaattttacccctttcct
gattccccttgaagaaccctgtccaatctcttactctgcttctatggagg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47739466_47740333
seq2: B6Ng01-168H05.g_312_1168

seq1  ATGAATCTTGCCAAAGCTGTACATTATTGAATATATGAATCTCACAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTTGCCAAAGCTGTACATTATTGAATATATGAATCTCACAACTA  50

seq1  AATTTAGTACCATTAAGATATTAATATGAATTGGGCAGGGTTCACATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTACCATTAAGATATTAATATGAATTGGGCAGGGTTCACATTTC  100

seq1  AGTTAAGGATGAAATTTTGCTCCTTGTTTGAGCAGGTTAAAGATAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGGATGAAATTTTGCTCCTTGTTTGAGCAGGTTAAAGATAGCTGT  150

seq1  CTTTTTAATGAGTTAATTTTATCAATAACCAATTGTAATAAGTCTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATGAGTTAATTTTATCAATAACCAATTGTAATAAGTCTTCATT  200

seq1  TATGCCATGTGAAGGATGATATGACGAATTTTTACCTGTCTTCTTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCATGTGAAGGATGATATGACGAATTTTTACCTGTCTTCTTTGATT  250

seq1  TTCTCAAACTTTTCGAGTCCTTCAGGAGGGTCTTTCCCTGTCATCTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAACTTTTCGAGTCCTTCAGGAGGGTCTTTCCCTGTCATCTTTGA  300

seq1  TGCATATGACTCTAGATAGGCTTCAAAGCCCTCTCTAGTTTCCTGTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGACTCTAGATAGGCTTCAAAGCCCTCTCTAGTTTCCTGTTAAC  350

seq1  ATAAACTCAGAGTTCTCTCCCAAAATAACATGTACTTGGTTCAGTAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTCAGAGTTCTCTCCCAAAATAACATGTACTTGGTTCAGTAACTG  400

seq1  CAAATAATTAAATGTTTATCTTAAGGAATTTCTATACGAATTTTAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATTAAATGTTTATCTTAAGGAATTTCTATACGAATTTTAATATA  450

seq1  ACCACTAAACTCATAATCACACTCATTTTGATAATTAAAACAATTCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAAACTCATAATCACACTCATTTTGATAATTAAAACAATTCAAAG  500

seq1  TAATATTTAAGATGGAATGCCTCAATATTTCTATTTCTCTATAATTAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTAAGATGGAATGCCTCAATATTTCTATTTCTCTATAATTAACT  550

seq1  TAATTAAATTCCCTCCTTCTTACTGTATCACTCTCCCCTATATTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATTCCCTCCTTCTTACTGTATCACTCTCCCCTATATTCTCTCT  600

seq1  TCTGTGGAGCTTAAGATCTGTATGTTTAAGTACATTTAAAGAATTACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAGCTTAAGATCTGTATGTTTAAGTACATTTAAAGAATTACTAT  650

seq1  AATATTTTTTTCTGTCCTTAAACACAGTTAAATCAAATTTTAAAAATCTT  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATATTTTTTTCTGTCCTTAAACACAGTTAAATCAAATTTT-AAAATCTT  699

seq1  TCCTTTGATACTTTTCTGGCTAGAGACAGGCAGCTTTATTATTTGTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCTTTGATACTTTTCTGGCTAGAGACAGGCAGCTTTATTATTTGTT-CT  748

seq1  CTCTCTCTCTCTTTTTAATTGGATACTTTATTTATTTACATTTCAAATTT  800
      |||||||||||||||    |||| | ||||||||||||||||||||||||
seq2  CTCTCTCTCTCTTTT---ATGGA-AATTTATTTATTTACATTTCAAATTT  794

seq1  TACCCCCTTTCCTGATTTCCCCTTGAGAAACCCCTGTCCCATCCCCCTTA  850
      || |||||||||||| |||||||||| | | |||||||| ||  | ||||
seq2  TA-CCCCTTTCCTGA-TTCCCCTTGA-AGAACCCTGTCCAAT--CTCTTA  839

seq1  CTCCTGCTTCTAT-GAGGG  868
      || |||||||||| |||||
seq2  CT-CTGCTTCTATGGAGGG  857