BAC Information

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BAC

Clone NameB6Ng01-169A23
Chromosome1 (Build37)
Map Location 47,473,511 - 47,474,452
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666855, Slc39a10, EG227061
Downstream geneLOC666869, LOC546734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169A23.b
ACCDH960138
length937
definitionDH960138|Mus musculus domesticus DNA, BAC clone: B6Ng01-169A23, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcttagtactttgcataatctggttctaagtgccgtgtgta
tctgtacaactttaagttagtgaagagtgatggcaagagatggcaaccct
gccttgcacacacacacacacacgtgcacacacacacacacacacacaca
cacacacacacacacacacacacacttggtctcatttgaccattagagac
aaggagcacgaacttccctgtgtgaactgaggtcaattgcacttgcaggg
ctagagcaacattcacacagtgtactcatgtgttttattcctagctagaa
agaagcttacatttcatttctcctttaaaaaatgttattgatgtcccatt
ttggtattttactcagctgaccacattttgtgtcctttacatgtatgcac
tttctcttattttctgttctgtttatacaaatctgttgacaagtttgagt
tcaaggaagatgtgacttgacaagaccatatgcataagctatatgtaaag
aaactgaactctaactccaggtaaatttcttaacttttgtccatgaaacc
agaaggtagacaatatagattttgaaggagacttgtagctgatgcatgta
gagttctttaagtaacatctgatatgtaggatactcataatcaaaatgag
aacagtggctctaaccagttcttttcaccttgcctattcttttactcctg
tccggaatcctcttaggatgttctttctataaagatgcttggcttttatt
tgttgttgtttagcttgtttttttttttttttttttttttttttaaatca
gatcctctgatctcacactgaatataccacataccccttccatgcttatt
atcattatattgatgcttatgggctttctacctttcttctttccctccct
ccttccctcctctccctctccctctcccttctccctc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47473511_47474452
seq2: B6Ng01-169A23.b_47_983

seq1  GAATTCTCTTCTTAGTACTTTGCATAATCTGGTTCTAAGTGCCGTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTTAGTACTTTGCATAATCTGGTTCTAAGTGCCGTGTGTA  50

seq1  TCTGTACAACTTTAAGTTAGTGAAGAGTGATGGCAAGAGATGGCAACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACAACTTTAAGTTAGTGAAGAGTGATGGCAAGAGATGGCAACCCT  100

seq1  GCCTTGCACACACACACACACACGTGCACACACACACACACACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCACACACACACACACACGTGCACACACACACACACACACACACA  150

seq1  CACACACACACACACACACACACACTTGGTCTCATTTGACCATTAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACTTGGTCTCATTTGACCATTAGAGAC  200

seq1  AAGGAGCACGAACTTCCCTGTGTGAACTGAGGTCAATTGCACTTGCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCACGAACTTCCCTGTGTGAACTGAGGTCAATTGCACTTGCAGGG  250

seq1  CTAGAGCAACATTCACACAGTGTACTCATGTGTTTTATTCCTAGCTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCAACATTCACACAGTGTACTCATGTGTTTTATTCCTAGCTAGAA  300

seq1  AGAAGCTTACATTTCATTTCTCCTTTAAAAAATGTTATTGATGTCCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTACATTTCATTTCTCCTTTAAAAAATGTTATTGATGTCCCATT  350

seq1  TTGGTATTTTACTCAGCTGACCACATTTTGTGTCCTTTACATGTATGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTTTACTCAGCTGACCACATTTTGTGTCCTTTACATGTATGCAC  400

seq1  TTTCTCTTATTTTCTGTTCTGTTTATACAAATCTGTTGACAAGTTTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTATTTTCTGTTCTGTTTATACAAATCTGTTGACAAGTTTGAGT  450

seq1  TCAAGGAAGATGTGACTTGACAAGACCATATGCATAAGCTATATGTAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAAGATGTGACTTGACAAGACCATATGCATAAGCTATATGTAAAG  500

seq1  AAACTGAACTCTAACTCCAGGTAAATTTCTTAACTTTTGTCCATGAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAACTCTAACTCCAGGTAAATTTCTTAACTTTTGTCCATGAAACC  550

seq1  AGAAGGTAGACAATATAGATTTTGAAGGAGACTTGTAGCTGATGCATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTAGACAATATAGATTTTGAAGGAGACTTGTAGCTGATGCATGTA  600

seq1  GAGTTCTTTAAGTAACATCTGATATGTAGGATACTCATAATCAAAATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTTTAAGTAACATCTGATATGTAGGATACTCATAATCAAAATGAG  650

seq1  AACAGTGGCTCTAACCAGTTCTTTTCACCTTGCCTATTCTTTTACTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGGCTCTAACCAGTTCTTTTCACCTTGCCTATTCTTTTACTCCTG  700

seq1  TCCGGAATCCTCTTAGGATGTTCTTTCTATAAAGATGCTTGGCTTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGAATCCTCTTAGGATGTTCTTTCTATAAAGATGCTTGGCTTTTATT  750

seq1  TGTTGTTGTTTAGCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTTAGCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATCA  800

seq1  GATCCTCTGATCTCACACTGAATATACCACATACCCCTTCCATGCTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTGATCTCACACTGAATATACCACATACCCCTTCCATGCTTATT  850

seq1  ATCATTATATTGATGCTTATGGGCTTTCTACCTTTCTTCCTTCCCTCCCT  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATCATTATATTGATGCTTATGGGCTTTCTACCTTTCTTCTTTCCCTCCCT  900

seq1  CCTTCCCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC  942
      |||||||||||||||||||||||||||||     ||||||||
seq2  CCTTCCCTCCTCTCCCTCTCCCTCTCCCT-----TCTCCCTC  937