BAC Information

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BAC

Clone NameB6Ng01-169B07
Chromosome1 (Build37)
Map Location 148,205,641 - 148,350,155
singlet/doubletdoublet
Overlap geneLOC383571, B830045N13Rik
Upstream genenone
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169B07.bB6Ng01-169B07.g
ACCDH960151DH960152
length1,1181,098
definitionDH960151|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B07, 5' end.DH960152|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,349,023 - 148,350,155)(148,205,641 - 148,206,749)
sequence
gaattcaggaagaataagtctatctgtaagtatttcttcacagtaaatct
ataatggaatttaaatgaaacacaccattatgagagaataattcttgcat
agcatagtgctataatacgtttgagtgtaatgttcatatatttattaatc
caatcaataaatgtgtattttatagatttaattttctggaactataatat
gatagttcctttattagctattaaggagaatttgttatactttgggtgct
cttaaggcatctaggtaaattagggtttatatattaaaacaatacttaaa
acaatttgtaaaataggtcagactatggataagtatattttaaactgtag
gcataataaacttttacaaataataaattaaaattgaaaatagtagatac
tgattcagtgtattgtcaagtatgtagattatgtatcactttctgcatca
caatttgtatttccttaattgaaaataaaccttcaaacaacacactgatt
tcatccttaaatatgtagtaatgcatcctatccatcaaaaagtattaatt
atgtaaattcatcttagagggaaataaatttgctactggatcacaattgg
acttatgtcacttgttaaagaatgaaaactttgttactttgaatacaaat
tagtaaacacttgaaaactctttgcgttatttattttaaactttattaag
agcagtagattcataatataaaataattatctgtgaaatccattcaatga
gatagaaatatttgtgataaattgaatacaaatgttctttgtggatcatc
aaatatttttaaaaaggatataagagtctaaaaatgtaaatgtcaattat
atttgaagaccattgtgaggggttatgtttgccacttgataccattaaga
tagtcatgagctagttcttggtaaatttttcgggcattgagtcaatggaa
agcccattagtactcagattaaatttcaaattcagagactgattctattt
tataaagagataaacatgtatacacttttattatttaacaattaaattgg
catcaaagacatgatttaaaaggaagtagtttgctaacatttgatctcat
gggaatttatatttttta
gaattcaggaatcagggtcagacagcatggtgaagtttttgaagagaatc
agagcacatgtagcaaaaggagagagcctcttcttacatcttttgtggaa
aagggggcagtgagcatggcaacaaattgcaggttctctgatttccaggt
tggaagtggggaaggaagtagaagcagactgtggtagctctttgatttaa
actcactcaggactcagtcaagttgactagctcaggccacacaaaggctc
agaatgatgcttatcagtatgtggggaaggggagttgctacaaaacagca
tctagatttgcacattacattctttcagatactttattttaggaaaaccc
aactgagaagattataattctctgtccaatatatttgcataaaaacaatg
tacatgtcagtttaggtgaggcaatggtatttggagctggactttctaaa
ctcaaattgcaaccaacatatatgctattgggattttaatagataaaata
actttcatctcatttattccttctaaaatattgggaacatccacatcttc
tactcactacttcattttacacataagtattcatatataacttataagac
tttggaatatacacaaggagtttcaaagtattgcaagtgattgctggaat
atagaaaatagtcagtaaattacaataattccattaaattatttcagtgg
atcataagcacatgtaactaagactgattattaactagaaattcatatgt
ataaattcctttcatttcaaactgagcctcaaattaaaaacatggtttct
ttgtgtcttttccctcaacatgctattttcgtaagtatgtaaatgttgtc
tattggtacatttcaaagattagagttacttgtaagtttgtctttcgtat
ttctgtcaagttttgggaatatctatcaatttatattaagagttgttgca
catacaggtcataaaaattttaaagatgccattataaatcaatcccttta
gatatcttaatgacaaacacttacattctacttcatatagaattagcttg
aatttagtttagttacataagagaacgttggccttattttgaccattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148349023_148350155
seq2: B6Ng01-169B07.b_47_1164 (reverse)

seq1  TAAAATATATAAATTCCCATTGAGATCAAATGTTAGCAATACTACTTTCT  50
      ||||| ||||||||||||| ||||||||||||||||||| ||||||| | 
seq2  TAAAAAATATAAATTCCCA-TGAGATCAAATGTTAGCAA-ACTACTTCC-  47

seq1  GTTTTAATATCATTGTCTTTTGATGGCCAATTTTAATTGTTTAAATAATA  100
       |||||| |||| |||| |||||| ||||| |||||||| ||||||||||
seq2  -TTTTAA-ATCA-TGTC-TTTGAT-GCCAA-TTTAATTG-TTAAATAATA  90

seq1  AAAGTGTATAACAATGTTTATTCTCTTTTATAAAATAGAATCAAGTCTCT  150
      ||||||||||   ||||||| |||| |||||||||||||||| |||||||
seq2  AAAGTGTATA--CATGTTTA-TCTC-TTTATAAAATAGAATC-AGTCTCT  135

seq1  GAATTTGAAATTTAATCTGAGTACTAATGGGCTTTCCATTGACTCAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAAATTTAATCTGAGTACTAATGGGCTTTCCATTGACTCAATGC  185

seq1  CCGAAAAATTTACCAAGAACTAGCTCATGACTATCTTAATGGTATCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAAATTTACCAAGAACTAGCTCATGACTATCTTAATGGTATCAAGT  235

seq1  GGCAAACATAACCCCTCACAATGGTCTTCAAATATAATTGACATTTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACATAACCCCTCACAATGGTCTTCAAATATAATTGACATTTACAT  285

seq1  TTTTAGACTCTTATATCCTTTTTAAAAATATTTGATGATCCACAAAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGACTCTTATATCCTTTTTAAAAATATTTGATGATCCACAAAGAAC  335

seq1  ATTTGTATTCAATTTATCACAAATATTTCTATCTCATTGAATGGATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTCAATTTATCACAAATATTTCTATCTCATTGAATGGATTTCA  385

seq1  CAGATAATTATTTTATATTATGAATCTACTGCTCTTAATAAAGTTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATTATTTTATATTATGAATCTACTGCTCTTAATAAAGTTTAAAA  435

seq1  TAAATAACGCAAAGAGTTTTCAAGTGTTTACTAATTTGTATTCAAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACGCAAAGAGTTTTCAAGTGTTTACTAATTTGTATTCAAAGTAA  485

seq1  CAAAGTTTTCATTCTTTAACAAGTGACATAAGTCCAATTGTGATCCAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTTCATTCTTTAACAAGTGACATAAGTCCAATTGTGATCCAGTA  535

seq1  GCAAATTTATTTCCCTCTAAGATGAATTTACATAATTAATACTTTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTTATTTCCCTCTAAGATGAATTTACATAATTAATACTTTTTGAT  585

seq1  GGATAGGATGCATTACTACATATTTAAGGATGAAATCAGTGTGTTGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGATGCATTACTACATATTTAAGGATGAAATCAGTGTGTTGTTTG  635

seq1  AAGGTTTATTTTCAATTAAGGAAATACAAATTGTGATGCAGAAAGTGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTATTTTCAATTAAGGAAATACAAATTGTGATGCAGAAAGTGATA  685

seq1  CATAATCTACATACTTGACAATACACTGAATCAGTATCTACTATTTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCTACATACTTGACAATACACTGAATCAGTATCTACTATTTTCAA  735

seq1  TTTTAATTTATTATTTGTAAAAGTTTATTATGCCTACAGTTTAAAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTATTATTTGTAAAAGTTTATTATGCCTACAGTTTAAAATATA  785

seq1  CTTATCCATAGTCTGACCTATTTTACAAATTGTTTTAAGTATTGTTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCATAGTCTGACCTATTTTACAAATTGTTTTAAGTATTGTTTTAA  835

seq1  TATATAAACCCTAATTTACCTAGATGCCTTAAGAGCACCCAAAGTATAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAACCCTAATTTACCTAGATGCCTTAAGAGCACCCAAAGTATAAC  885

seq1  AAATTCTCCTTAATAGCTAATAAAGGAACTATCATATTATAGTTCCAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCCTTAATAGCTAATAAAGGAACTATCATATTATAGTTCCAGAA  935

seq1  AATTAAATCTATAAAATACACATTTATTGATTGGATTAATAAATATATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATCTATAAAATACACATTTATTGATTGGATTAATAAATATATGA  985

seq1  ACATTACACTCAAACGTATTATAGCACTATGCTATGCAAGAATTATTCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACACTCAAACGTATTATAGCACTATGCTATGCAAGAATTATTCTC  1035

seq1  TCATAATGGTGTGTTTCATTTAAATTCCATTATAGATTTACTGTGAAGAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATGGTGTGTTTCATTTAAATTCCATTATAGATTTACTGTGAAGAA  1085

seq1  ATACTTACAGATAGACTTATTCTTCCTGAATTC  1133
      |||||||||||||||||||||||||||||||||
seq2  ATACTTACAGATAGACTTATTCTTCCTGAATTC  1118

seq1: chr1_148205641_148206749
seq2: B6Ng01-169B07.g_68_1165

seq1  GAATTCAGGAATCAGGGTCAGACAGCATGGTGAAGTTTTTGAAGAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAATCAGGGTCAGACAGCATGGTGAAGTTTTTGAAGAGAATC  50

seq1  AGAGCACATGTAGCAAAAGGAGAGAGCCTCTTCTTACATCTTTTGTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATGTAGCAAAAGGAGAGAGCCTCTTCTTACATCTTTTGTGGAA  100

seq1  AAGGGGGCAGTGAGCATGGCAACAAATTGCAGGTTCTCTGATTTCCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGCAGTGAGCATGGCAACAAATTGCAGGTTCTCTGATTTCCAGGT  150

seq1  TGGAAGTGGGGAAGGAAGTAGAAGCAGACTGTGGTAGCTCTTTGATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGGGGAAGGAAGTAGAAGCAGACTGTGGTAGCTCTTTGATTTAA  200

seq1  ACTCACTCAGGACTCAGTCAAGTTGACTAGCTCAGGCCACACAAAGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCAGGACTCAGTCAAGTTGACTAGCTCAGGCCACACAAAGGCTC  250

seq1  AGAATGATGCTTATCAGTATGTGGGGAAGGGGAGTTGCTACAAAACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATGCTTATCAGTATGTGGGGAAGGGGAGTTGCTACAAAACAGCA  300

seq1  TCTAGATTTGCACATTACATTCTTTCAGATACTTTATTTTAGGAAAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATTTGCACATTACATTCTTTCAGATACTTTATTTTAGGAAAACCC  350

seq1  AACTGAGAAGATTATAATTCTCTGTCCAATATATTTGCATAAAAACAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAAGATTATAATTCTCTGTCCAATATATTTGCATAAAAACAATG  400

seq1  TACATGTCAGTTTAGGTGAGGCAATGGTATTTGGAGCTGGACTTTCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTCAGTTTAGGTGAGGCAATGGTATTTGGAGCTGGACTTTCTAAA  450

seq1  CTCAAATTGCAACCAACATATATGCTATTGGGATTTTAATAGATAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTGCAACCAACATATATGCTATTGGGATTTTAATAGATAAAATA  500

seq1  ACTTTCATCTCATTTATTCCTTCTAAAATATTGGGAACATCCACATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATCTCATTTATTCCTTCTAAAATATTGGGAACATCCACATCTTC  550

seq1  TACTCACTACTTCATTTTACACATAAGTATTCATATATAACTTATAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACTACTTCATTTTACACATAAGTATTCATATATAACTTATAAGAC  600

seq1  TTTGGAATATACACAAGGAGTTTCAAAGTATTGCAAGTGATTGCTGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATATACACAAGGAGTTTCAAAGTATTGCAAGTGATTGCTGGAAT  650

seq1  ATAGAAAATAGTCAGTAAATTACAATAATTCCATTAAATTATTTCAGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAATAGTCAGTAAATTACAATAATTCCATTAAATTATTTCAGTGG  700

seq1  ATCATAAGCACATGTAACTAAGACTGATTATTAACTAGAAATTCATATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAGCACATGTAACTAAGACTGATTATTAACTAGAAATTCATATGT  750

seq1  ATAAATTCCTTTCATTTCAAACTGAGCCTCAAATTAAAAACATGGTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCCTTTCATTTCAAACTGAGCCTCAAATTAAAAACATGGTTTCT  800

seq1  TTGTGTCTTTTCCCTCAACATGCTATTTTCGTAAGTATGTAAATGTTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTTTCCCTCAACATGCTATTTTCGTAAGTATGTAAATGTTGTC  850

seq1  TATTGGTACATTTCAAAGATTAGAGTTACTTGTAAGTTTGTCTTTCGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTACATTTCAAAGATTAGAGTTACTTGTAAGTTTGTCTTTCGTAT  900

seq1  TTCTGTCAAGTTTTGGGAATAATCTATCAAATTTATATTAAGAAGTTGTT  950
      |||||||||||||||||||| ||||||| ||||||||||||| |||||||
seq2  TTCTGTCAAGTTTTGGGAAT-ATCTATC-AATTTATATTAAG-AGTTGTT  947

seq1  GCACAATACAGGTCATAAAAATTTTAAAGATGCCATTATAAATCAAATCC  1000
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCAC-ATACAGGTCATAAAAATTTTAAAGATGCCATTATAAATC-AATCC  995

seq1  CCTTTAAGATATCTTAATGACAAAACACTTACATCTAACTTCAATATTAG  1050
      |  || ||||||||||||||| ||||||||||||   ||||| ||| |||
seq2  C--TTTAGATATCTTAATGAC-AAACACTTACATTCTACTTC-ATA-TAG  1040

seq1  AATTAGC-TGAATTTAAGTTAGTGACATAAAGAGAACGTTGGCCTTATTT  1099
      ||||||| ||||||||  ||||| |||| |||||||||||||||||||||
seq2  AATTAGCTTGAATTTAGTTTAGTTACAT-AAGAGAACGTTGGCCTTATTT  1089

seq1  TGAACCATTT  1109
      || |||||||
seq2  TG-ACCATTT  1098