BAC Information

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BAC

Clone NameB6Ng01-169N04
Chromosome1 (Build37)
Map Location 73,357,474 - 73,478,308
singlet/doubletdoublet
Overlap genePinc
Upstream geneXrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream geneLOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169N04.bB6Ng01-169N04.g
ACCDH960695DH960696
length1871,024
definitionDH960695|Mus musculus domesticus DNA, BAC clone: B6Ng01-169N04, 5' end.DH960696|Mus musculus domesticus DNA, BAC clone: B6Ng01-169N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,357,474 - 73,357,660)(73,477,601 - 73,478,308)
sequence
agttcccaagtgcctgtccatcttcaagggatacaaaacctctagcatct
tcaaacactgtgctcatgtgtgctaggtgcaaatacatacatataaaccg
gcatacacacacacacacacacacacacacacacacacacactcacacac
aaatgaagagagagagaaagacagagggggggaggga
gaattctttctaaattttatgcattatatatctgtacatttatatgtctg
aaattgtaattttactacattaaatttttaatctttttaatttgctcttc
ctatagtcatccaatttttcctattgtgatacactacattttcttttcct
taatgttgtctttattgcacctgtgtcacctgtccatatttagcatcatt
ttgactttgccttcttaatttcttaaaaatttatttcttattattatttc
tacatttatctgatttttattattttaatttttttgctctttttcttgct
tctccaatatcttctcccctttgtttcttcttcctgttttgtttatttaa
ctttttttctcttttccttcttattgattattatttctatacttaaactg
tcacctcataacaacagctataagacaatgttatacgcagctgcaatatc
tattacaacagtagggaaatactagcatctcaagacaagtccagaataag
taagtaactcatgaccactgcagaagcgagctgaaagaatattgtgcaga
ggagaaaatgagaggctcaactacaaagcagaggaaagaataaagttcat
ggctgaaatgactgcacaagggagagctaagaggaaactagttacattga
acgcataaaccagaaaacttccaatactaataggtgaagaaataaagaat
tagctaataatataagcaaccagcaaaagaatcaacaaaattacaggaat
tagttctcagtaataccctgaaatgtaaatggtattaactcaccaaaaga
aagacacaatctggctgactagattataaaactagattaagtctactatc
tccaagaacactccttggaaaacacccatgaactaagagtcaaagaatga
aaacatctattcaataagtggaataacaaagacactggcatatttgtttt
atatctaaaaactttatttcagaaaaatagtcagaaaagataagaaccca
tacaaacgaagagaacatttatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73357474_73357660
seq2: B6Ng01-169N04.b_49_235

seq1  AGTTCCCAAGTGCCTGTCCATCTTCAAGGGATACAAAACCTCTAGCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCAAGTGCCTGTCCATCTTCAAGGGATACAAAACCTCTAGCATCT  50

seq1  TCAAACACTGTGCTCATGTGTGCTAGGTGCAAATACATACATATAAACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACTGTGCTCATGTGTGCTAGGTGCAAATACATACATATAAACCG  100

seq1  GCATACACACACACACACACACACACACACACACACACACACTCACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACACACACACACACACACACACACACACACACACACTCACACAC  150

seq1  AAATGAAGAGAGAGAGAAAGACAGAGGGGGGGAGGGA  187
      |||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAGAGAGAGAAAGACAGAGGGGGGGAGGGA  187

seq1: chr1_73477601_73478308
seq2: B6Ng01-169N04.g_66_773 (reverse)

seq1  ATTAGCTAATTCTTTATTTCTTCACCTATTAGTATTGGAAGTTTTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTAATTCTTTATTTCTTCACCTATTAGTATTGGAAGTTTTCTGGT  50

seq1  TTATGCGTTCAATGTAACTAGTTTCCTCTTAGCTCTCCCTTGTGCAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCGTTCAATGTAACTAGTTTCCTCTTAGCTCTCCCTTGTGCAGTCA  100

seq1  TTTCAGCCATGAACTTTATTCTTTCCTCTGCTTTGTAGTTGAGCCTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCATGAACTTTATTCTTTCCTCTGCTTTGTAGTTGAGCCTCTCA  150

seq1  TTTTCTCCTCTGCACAATATTCTTTCAGCTCGCTTCTGCAGTGGTCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTCTGCACAATATTCTTTCAGCTCGCTTCTGCAGTGGTCATGA  200

seq1  GTTACTTACTTATTCTGGACTTGTCTTGAGATGCTAGTATTTCCCTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTACTTATTCTGGACTTGTCTTGAGATGCTAGTATTTCCCTACTG  250

seq1  TTGTAATAGATATTGCAGCTGCGTATAACATTGTCTTATAGCTGTTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATAGATATTGCAGCTGCGTATAACATTGTCTTATAGCTGTTGTTA  300

seq1  TGAGGTGACAGTTTAAGTATAGAAATAATAATCAATAAGAAGGAAAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGACAGTTTAAGTATAGAAATAATAATCAATAAGAAGGAAAAGAG  350

seq1  AAAAAAAGTTAAATAAACAAAACAGGAAGAAGAAACAAAGGGGAGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTTAAATAAACAAAACAGGAAGAAGAAACAAAGGGGAGAAGAT  400

seq1  ATTGGAGAAGCAAGAAAAAGAGCAAAAAAATTAAAATAATAAAAATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGAAGCAAGAAAAAGAGCAAAAAAATTAAAATAATAAAAATCAGA  450

seq1  TAAATGTAGAAATAATAATAAGAAATAAATTTTTAAGAAATTAAGAAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAGAAATAATAATAAGAAATAAATTTTTAAGAAATTAAGAAGGC  500

seq1  AAAGTCAAAATGATGCTAAATATGGACAGGTGACACAGGTGCAATAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAAATGATGCTAAATATGGACAGGTGACACAGGTGCAATAAAGA  550

seq1  CAACATTAAGGAAAAGAAAATGTAGTGTATCACAATAGGAAAAATTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTAAGGAAAAGAAAATGTAGTGTATCACAATAGGAAAAATTGGAT  600

seq1  GACTATAGGAAGAGCAAATTAAAAAGATTAAAAATTTAATGTAGTAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATAGGAAGAGCAAATTAAAAAGATTAAAAATTTAATGTAGTAAAAT  650

seq1  TACAATTTCAGACATATAAATGTACAGATATATAATGCATAAAATTTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTCAGACATATAAATGTACAGATATATAATGCATAAAATTTAGA  700

seq1  AAGAATTC  708
      ||||||||
seq2  AAGAATTC  708