BAC Information

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BAC

Clone NameB6Ng01-170B17
Chromosome1 (Build37)
Map Location 107,070,809 - 107,071,879
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383546, LOC100041134, Cdh20
Downstream geneRnf152, LOC100041985, Pign, LOC666249, 2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634, Phlpp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170B17.bB6Ng01-170B17.g
ACCDH960905DH960906
length1,2501,067
definitionDH960905|Mus musculus domesticus DNA, BAC clone: B6Ng01-170B17, 5' end.DH960906|Mus musculus domesticus DNA, BAC clone: B6Ng01-170B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgatcaaagtaatctacagcaaacca
gtagccaacatcatcataaatggagagaagcttgaagcaatcccactaaa
atcagggactagacaaggttgcccactttctccctacctattcaacatag
tacttgaagtcctagccagagcaatttgacaacaaaaggagatcaagggg
atacaaacgaaatgaagaagtcaaaatatcagtttttgcaaatgatatca
tagtatatataagtgaccctaaaaattccaccagagaactcctaaacctg
ataaacagcttcagtgaagtagctggatataaaattaactcaaacaagtc
aatggcctgtctgtatacaaaggataaacaggctgagaaagaaattaggg
aaacaacacccttctcaatagtcacaaataatataaaatatcttggcgtg
actctaactaaggaagtgaaagatctgtgtgataagaatttcaagtctct
gaagaaagaaattaaagtagatctcagaagatggaaagatctcccatgct
catggattggcaggatcaatatagtaaaactggctatcttgccaaaagca
atctacagattcaatgcaatccccatcaaaattccaactcaattcttcaa
cgaattagaaagggcaatctgaaaattcatctggaataacaaaaacttaa
gatagcaaaaactcttctcaaggataaaagaacctctggtggaatcacca
tgcctgacctaaagctttactacagataaaaactgcatggtactggtata
gcgacagacaagtagaccaatggaacagaattgaagacccagaaatgaac
ccacacacctatgatcacttgaactttgacaagggagctaaaccatccag
tggaaaaagacagcactttcacaaatggtgctggctcaactggcagttat
catgtagaagaatgcgaattgatccattctatctccttgtactaagtcaa
atctaagtggatcaaggactccacataaacaagagacagtgaaacttgga
gaggaatagtggggaaaagtcttgaagatatggcacaggaaaaattctga
atgaacagcattggctgtgctgtagatcagaatcaacaatgcctctaaat
actaggcttggccaggtgagacctgcctaagagactaaggaactcacaga
atgggtagactttatcatctcgaaattcgtgaatggactatatatctaat

gaattccatgcatgctattgagcctaaaacgtgggctgtgaaatgtagaa
actgggtagttgagttgcagctacagagaaacaatcggaagctccacatt
cacactgcagctgaaaacagcagcagctaagcacgcaggcagcgcaggga
aggaagaatctggatcccatacaacgctagaagctgggtggggctggaga
catagctcagggtgaagtacgtctttgcccttactcaggatctgggctca
gttcttagcacccatggcaggtggcttacaacttctgtcactccagctcg
agagatccaacactttcctcttccttctggcctccttgggcacttgcact
aaagtgcaccccatatatctctatgtctgtctgtctgtctatctatctat
ctatctatctatctatctatctatctatctatgaaaaatgtttaaaatga
taaagaaaaatagacagcagcttcttttgaagccagagtgtgggattgtg
gaaccctgtgttgtatcctcctctctcccctgtttggctgctgcttagca
gttgttgaaatacatgaggctctggtttgcatgtccaggaattctaaatt
tgtaaacacttatatgtcctttcccatgtaaaataccaggataaaacatc
tttacagacaatatgtcttgtaaaagacttgtacttaaaactcgatggta
agaaaattaacacaaaaaaagaaaagaaaattaacacccttattcaaaaa
taaaaaaaaacatgaaaacaatcttcaccctagaaaattttgtcctgatt
aattttaggttgactcgacacaagatgtagtgatttggaaaaggagacac
cctaattgagaaactgccctatgagatctgcctgtaggcaatgtgtagta
cattttcttgattaattactaacatagaggctcagctctcctgggctggt
gatccatagtgctataaaaaaacaggactgagtaggcataaggagcatac
aattaagcaacaatcctttatggattctgcatcactgctgcctcaggttt
cttggcctgacttccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_107070809_107071879
seq2: B6Ng01-170B17.g_68_1134 (reverse)

seq1  AGGGAAGTCAGGGCAAGAAACCTGGAGGCAGCAGTTGATGCAGAGTCCAT  50
      |||||||||||| |||||||||| |||||||||| ||||||||| |||||
seq2  AGGGAAGTCAGGCCAAGAAACCT-GAGGCAGCAG-TGATGCAGAATCCAT  48

seq1  AAAGGAATGTTGCTTAATGGTTTGCTCCTTATGGCTTACTCAGT-CTGTT  99
      |||||| ||||||||||| || |||||||||| || |||||||| |||||
seq2  AAAGGATTGTTGCTTAATTGTATGCTCCTTAT-GCCTACTCAGTCCTGTT  97

seq1  TTTTTATAGCACTATGGATCACCAGCCCAGGAGAGCTGGGCCCTCCTATG  149
      |||||||||||||||||||||||||||||||||||||| |||   |||||
seq2  TTTTTATAGCACTATGGATCACCAGCCCAGGAGAGCTGAGCC--TCTATG  145

seq1  TTAGTAATTAATCAAGAAAATGTACTACACATTGCCTACAGGCAGATCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATTAATCAAGAAAATGTACTACACATTGCCTACAGGCAGATCTC  195

seq1  ATAGGGCAGTTTCTCAATTAGGGTGTCTCCTTTTCCAAATCACTACATCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCAGTTTCTCAATTAGGGTGTCTCCTTTTCCAAATCACTACATCT  245

seq1  TGTGTCGAGTCAACCTAAAATTAATCAGGACAAAATTTTCTAGGGTGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGAGTCAACCTAAAATTAATCAGGACAAAATTTTCTAGGGTGAAG  295

seq1  ATTGTTTTCATGTTTTTTTTTATTTTTGAATAAGGGTGTTAATTTTCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTCATGTTTTTTTTTATTTTTGAATAAGGGTGTTAATTTTCTTT  345

seq1  TCTTTTTTTGTGTTAATTTTCTTACCATCGAGTTTTAAGTACAAGTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTGTGTTAATTTTCTTACCATCGAGTTTTAAGTACAAGTCTTT  395

seq1  TACAAGACATATTGTCTGTAAAGATGTTTTATCCTGGTATTTTACATGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGACATATTGTCTGTAAAGATGTTTTATCCTGGTATTTTACATGGG  445

seq1  AAAGGACATATAAGTGTTTACAAATTTAGAATTCCTGGACATGCAAACCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACATATAAGTGTTTACAAATTTAGAATTCCTGGACATGCAAACCA  495

seq1  GAGCCTCATGTATTTCAACAACTGCTAAGCAGCAGCCAAACAGGGGAGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCATGTATTTCAACAACTGCTAAGCAGCAGCCAAACAGGGGAGAG  545

seq1  AGGAGGATACAACACAGGGTTCCACAATCCCACACTCTGGCTTCAAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGATACAACACAGGGTTCCACAATCCCACACTCTGGCTTCAAAAGA  595

seq1  AGCTGCTGTCTATTTTTCTTTATCATTTTAAACATTTTTCATAGATAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGTCTATTTTTCTTTATCATTTTAAACATTTTTCATAGATAGAT  645

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAT  695

seq1  AGAGATATATGGGGTGCACTTTAGTGCAAGTGCCCAAGGAGGCCAGAAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATATATGGGGTGCACTTTAGTGCAAGTGCCCAAGGAGGCCAGAAGG  745

seq1  AAGAGGAAAGTGTTGGATCTCTCGAGCTGGAGTGACAGAAGTTGTAAGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAAGTGTTGGATCTCTCGAGCTGGAGTGACAGAAGTTGTAAGCC  795

seq1  ACCTGCCATGGGTGCTAAGAACTGAGCCCAGATCCTGAGTAAGGGCAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCATGGGTGCTAAGAACTGAGCCCAGATCCTGAGTAAGGGCAAAG  845

seq1  ACGTACTTCACCCTGAGCTATGTCTCCAGCCCCACCCAGCTTCTAGCGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTTCACCCTGAGCTATGTCTCCAGCCCCACCCAGCTTCTAGCGTT  895

seq1  GTATGGGATCCAGATTCTTCCTTCCCTGCGCTGCCTGCGTGCTTAGCTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGATCCAGATTCTTCCTTCCCTGCGCTGCCTGCGTGCTTAGCTGC  945

seq1  TGCTGTTTTCAGCTGCAGTGTGAATGTGGAGCTTCCGATTGTTTCTCTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTTCAGCTGCAGTGTGAATGTGGAGCTTCCGATTGTTTCTCTGT  995

seq1  AGCTGCAACTCAACTACCCAGTTTCTACATTTCACAGCCCACGTTTTAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAACTCAACTACCCAGTTTCTACATTTCACAGCCCACGTTTTAGG  1045

seq1  CTCAATAGCATGCATGGAATTC  1071
      ||||||||||||||||||||||
seq2  CTCAATAGCATGCATGGAATTC  1067