BAC Information

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BAC

Clone NameB6Ng01-170H02
Chromosome1 (Build37)
Map Location 188,249,854 - 188,399,786
singlet/doubletdoublet
Overlap genenone
Upstream geneEprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik, LOC677785, Lyplal1
Downstream geneTgfb2, Rrp15, LOC666832, LOC100042375, D1Pas1, Spata17, Gpatch2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170H02.bB6Ng01-170H02.g
ACCDH961153DH961154
length831,022
definitionDH961153|Mus musculus domesticus DNA, BAC clone: B6Ng01-170H02, 5' end.DH961154|Mus musculus domesticus DNA, BAC clone: B6Ng01-170H02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(188,249,854 - 188,249,934)(188,398,770 - 188,399,786)
sequence
tacaacctttgatgccacaaaaaccaaacctggaatacacatgacttctc
ttctcttctcttctcttctcttatcttatctta
gaattctgtgacaagtgaacttcccttttatttgcagtggcagccaaggt
cgggtgcaggtcaggtcaaatccatctgtttcctcctctctttctagatc
ttctgtgtcaactcttgtatcacagtgacctagaggggaagctcacacag
agaggcagagacggtgcctatcgctgtcctacagagatgcaccacactgt
ggcatcccagaagacaggcctgctgactcttgcacaccttagagggcaga
acaacgtaaacgtttcgagagtactctgcagcccggtctctcaggttcaa
atccatccgaagccccgagtttagctatctcttttctctctgcttccatt
ttctcagccatggaacagaggatatcagcacctacagcagtggtgtgagt
taataaggggttgaatgatctgaactgtctggaaagccaaccatttacag
aattgtgtggtgggagggtaactgtactgggaaaacttgagtgcaggcaa
tgtaagtgtcagaagtgtgcggccagtttatctgcgatgtacattacaag
tgatgaggcttgctgccctccctccctagttcttcctgcggaatcttgag
ctagttgggatgaacagacacagctgctctctctgccagatggaacaagt
aggccacgcctttgcttagatggcctttcaggatctatacagaaggcaaa
cgattgggatggcatctgctctctgagttgcattggttcacagatcatca
acctgatgcaggtgcaacggtcatccagggcgtctgtgtgggtgtgggtg
tgagaattttgtctgaaactttttctttccatgtaactgcatgacaggtg
gacggtgtcaaaggcatctcggaatgatgctctaagaatttccttgtcgg
ttttgatctttttcatttggggatctctgtccagcttttctccccctctg
ctctaagtgtctggggtcagtcctcctcttctgcatgtcctccaaatgag
cttccgttgctctccatgtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_188249854_188249934
seq2: B6Ng01-170H02.b_49_130

seq1  TACAACCTTTGATGCCACAAAAACC-ATCCTGGAATACACATGACTTCTC  49
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  TACAACCTTTGATGCCACAAAAACCAAACCTGGAATACACATGACTTCTC  50

seq1  TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT  81
      |||||||||||||||||||||| |||| ||||
seq2  TTCTCTTCTCTTCTCTTCTCTTATCTTATCTT  82

seq1: chr1_188398770_188399786
seq2: B6Ng01-170H02.g_68_1089 (reverse)

seq1  TAGACATGGAGAGCAACGGAAGCTCA-TTGGAGGCCATTGCAGGAGAGGG  49
      |||||||||||||||||||||||||| ||||||| || ||||| ||| ||
seq2  TAGACATGGAGAGCAACGGAAGCTCATTTGGAGGACA-TGCAGAAGA-GG  48

seq1  AGGGCTTGACCCAGACACCTTAGAGCAGAGGGG--GGAAAGCT-GACAGA  96
      ||| ||   |||||||| |||||||||||||||  | |||||| ||||||
seq2  AGGACTGACCCCAGACA-CTTAGAGCAGAGGGGGAGAAAAGCTGGACAGA  97

seq1  GAT-CCCAAATG-AAAAGATCAAAACCGACAAGGAAATTCTTAG-GCATC  143
      ||| |||||||| ||||||||||||||||||||||||||||||| |||||
seq2  GATCCCCAAATGAAAAAGATCAAAACCGACAAGGAAATTCTTAGAGCATC  147

seq1  ATTCCGAGATGCCTTTGACACCGTCCACCTGTCATGCAGTTACATGGAAA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGAGATGCCTTTGACACCGTCCACCTGTCATGCAGTTACATGGAAA  197

seq1  G-AAGAGTTTCAGACAAAATTCTCACACCAACACCCACACAGACGCCCTG  242
      | || |||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAAAAGTTTCAGACAAAATTCTCACACCCACACCCACACAGACGCCCTG  247

seq1  GATGACCGTTGCACCTGCATCAGGTTGATGATCTGTGAACCAATGCAACT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCGTTGCACCTGCATCAGGTTGATGATCTGTGAACCAATGCAACT  297

seq1  CAGAGAGCAGATGCCATCCCAATCGTTTGCCTTCTGTATAGATCCTGAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCAGATGCCATCCCAATCGTTTGCCTTCTGTATAGATCCTGAAA  347

seq1  GGCCATCTAAGCAAAGGCGTGGCCTACTTGTTCCATCTGGCAGAGAGAGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCTAAGCAAAGGCGTGGCCTACTTGTTCCATCTGGCAGAGAGAGC  397

seq1  AGCTGTGTCTGTTCATCCCAACTAGCTCAAGATTCCGCAGGAAGAACTAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTCTGTTCATCCCAACTAGCTCAAGATTCCGCAGGAAGAACTAG  447

seq1  GGAGGGAGGGCAGCAAGCCTCATCACTTGTAATGTACATCGCAGATAAAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGGCAGCAAGCCTCATCACTTGTAATGTACATCGCAGATAAAC  497

seq1  TGGCCGCACACTTCTGACACTTACATTGCCTGCACTCAAGTTTTCCCAGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGCACACTTCTGACACTTACATTGCCTGCACTCAAGTTTTCCCAGT  547

seq1  ACAGTTACCCTCCCACCACACAATTCTGTAAATGGTTGGCTTTCCAGACA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACCCTCCCACCACACAATTCTGTAAATGGTTGGCTTTCCAGACA  597

seq1  GTTCAGATCATTCAACCCCTTATTAACTCACACCACTGCTGTAGGTGCTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATCATTCAACCCCTTATTAACTCACACCACTGCTGTAGGTGCTG  647

seq1  ATATCCTCTGTTCCATGGCTGAGAAAATGGAAGCAGAGAGAAAAGAGATA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTCTGTTCCATGGCTGAGAAAATGGAAGCAGAGAGAAAAGAGATA  697

seq1  GCTAAACTCGGGGCTTCGGATGGATTTGAACCTGAGAGACCGGGCTGCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACTCGGGGCTTCGGATGGATTTGAACCTGAGAGACCGGGCTGCAG  747

seq1  AGTACTCTCGAAACGTTTACGTTGTTCTGCCCTCTAAGGTGTGCAAGAGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTCGAAACGTTTACGTTGTTCTGCCCTCTAAGGTGTGCAAGAGT  797

seq1  CAGCAGGCCTGTCTTCTGGGATGCCACAGTGTGGTGCATCTCTGTAGGAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCCTGTCTTCTGGGATGCCACAGTGTGGTGCATCTCTGTAGGAC  847

seq1  AGCGATAGGCACCGTCTCTGCCTCTCTGTGTGAGCTTCCCCTCTAGGTCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATAGGCACCGTCTCTGCCTCTCTGTGTGAGCTTCCCCTCTAGGTCA  897

seq1  CTGTGATACAAGAGTTGACACAGAAGATCTAGAAAGAGAGGAGGAAACAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATACAAGAGTTGACACAGAAGATCTAGAAAGAGAGGAGGAAACAG  947

seq1  ATGGATTTGACCTGACCTGCACCCGACCTTGGCTGCCACTGCAAATAAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTGACCTGACCTGCACCCGACCTTGGCTGCCACTGCAAATAAAA  997

seq1  GGGAAGTTCACTTGTCACAGAATTC  1017
      |||||||||||||||||||||||||
seq2  GGGAAGTTCACTTGTCACAGAATTC  1022