BAC Information

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BAC

Clone NameB6Ng01-170J06
Chromosome1 (Build37)
Map Location 190,618,801 - 190,619,456
singlet/doubletsinglet
Overlap geneUsh2a
Upstream geneEsrrg, 9330162B11Rik
Downstream geneKctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf, Ptpn14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170J06.bB6Ng01-170J06.g
ACCDH961255DH961256
length6561,217
definitionDH961255|Mus musculus domesticus DNA, BAC clone: B6Ng01-170J06, 5' end.DH961256|Mus musculus domesticus DNA, BAC clone: B6Ng01-170J06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaaggaagccatttgaccagagctttcattgtggggagtttc
tctgtaaattgtacactattgctatgaattacaaactctcttcagatttt
cagtatttccccattcagtcttggaaaggttatagttctgtcactttgta
gctgtcatctagtagcatagacttgtaaggactgagtgtggacaggaaag
acctggtgggtcgctgctaggcatccttgactttatttgctaccccttgt
gtctctggccgtgggcagattctgccccgtggctttcctaccaattcatc
ttgcttcccctgtacctacactgtaggtctcccgggaaaatgagctaatt
aacagagaacaaggacatccaagaccttgagctccctcaatcctcattga
acttggccctttccttattaaagcttagtgacttattgcttatattatac
aacctctggactatgttttaaaatcatccaactacttagcctggccactg
tgctcatccaccttgcaaatgtattcaaggaatacagtccagggaaagaa
acagcctaagaaggggtaacacaggaagtggggaggagctgttgacggtt
ccttcaccataaagagaagagacaagccacggaggaggaggaggaggagg
ggggga
gaattctcttcatctggctgtatagaaaagctggggatggatcatgggcc
tgctagatgcacacatcctcctcacacacaatgtttagtctcatatgcac
ctgattattaaacgataggaaggaggctgtagtggctattcctggttgtc
aacttgacaatatttggaatgaactacaatccggaattagaaggctcacc
agtgacccttatctggaggcttggagatccttatctggatcttggtttga
agatcttgagccatagtggctatggattccagaagattgaatctccgagt
taaggaacacacctttaatctgggctatgcctttcatctgggattaaagg
tgtggtggaacacacctttaatctgggctacaccttttgctggagacaat
ataaggacattggaagaagggagtctagctcttgctcctgctccttcgcc
tgcttgctgcgtgagactgagtaactgctagatccttggacttccattca
cagctgtgactgaacgattgttgggaattgagctgccgactgtaagtcat
caataaattcctttattatctagagactatccataagttctgtgactcta
gagaaccctgactaatacagaagttggtaccaggagtggttctagagtaa
cagaagtacaaggatgaatcttttaaaattctggaattggctttgttgat
ccaccagcactttcaactattgaaacctctccagattctctccctcctgg
gagctcagagaattttgaagacccatggttgaaactatattccgaactta
aagaagctaatgcccttgattttcttatgaattaggtgattcagtgcaca
aagctttctacaagatgggaaaaaatcgaaaatgattttactggctggct
gctcttagtatctgtggaaaaatgatgaatgaaaggaaggagttgtgtga
ttaaatcgaaagtctccagacacaggtagtgatctaaagttgctaagtgt
gtctttgaggagaatcttctctcttgagcaataaagcctcagtgtagaaa
tcaatcagaaatttctcattgtaaggttgctgactacgccaatccaagtc
tcatcctcaaggtgcgaccagttaagtagggtcttattggtcaaaaatgg
gactctcacactgcgatgcgggaatgttggagaaccggttggacccgcta
gaattttgaacttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_190618801_190619456
seq2: B6Ng01-170J06.b_47_702

seq1  GAATTCACCAAGGAAGCCATTTGACCAGAGCTTTCATTGTGGGGAGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAGGAAGCCATTTGACCAGAGCTTTCATTGTGGGGAGTTTC  50

seq1  TCTGTAAATTGTACACTATTGCTATGAATTACAAACTCTCTTCAGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAATTGTACACTATTGCTATGAATTACAAACTCTCTTCAGATTTT  100

seq1  CAGTATTTCCCCATTCAGTCTTGGAAAGGTTATAGTTCTGTCACTTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTTCCCCATTCAGTCTTGGAAAGGTTATAGTTCTGTCACTTTGTA  150

seq1  GCTGTCATCTAGTAGCATAGACTTGTAAGGACTGAGTGTGGACAGGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATCTAGTAGCATAGACTTGTAAGGACTGAGTGTGGACAGGAAAG  200

seq1  ACCTGGTGGGTCGCTGCTAGGCATCCTTGACTTTATTTGCTACCCCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTGGGTCGCTGCTAGGCATCCTTGACTTTATTTGCTACCCCTTGT  250

seq1  GTCTCTGGCCGTGGGCAGATTCTGCCCCGTGGCTTTCCTACCAATTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGCCGTGGGCAGATTCTGCCCCGTGGCTTTCCTACCAATTCATC  300

seq1  TTGCTTCCCCTGTACCTACACTGTAGGTCTCCCGGGAAAATGAGCTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCCCTGTACCTACACTGTAGGTCTCCCGGGAAAATGAGCTAATT  350

seq1  AACAGAGAACAAGGACATCCAAGACCTTGAGCTCCCTCAATCCTCATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAACAAGGACATCCAAGACCTTGAGCTCCCTCAATCCTCATTGA  400

seq1  ACTTGGCCCTTTCCTTATTAAAGCTTAGTGACTTATTGCTTATATTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCCTTTCCTTATTAAAGCTTAGTGACTTATTGCTTATATTATAC  450

seq1  AACCTCTGGACTATGTTTTAAAATCATCCAACTACTTAGCCTGGCCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGGACTATGTTTTAAAATCATCCAACTACTTAGCCTGGCCACTG  500

seq1  TGCTCATCCACCTTGCAAATGTATTCAAGGAATACAGTCCAGGGAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCCACCTTGCAAATGTATTCAAGGAATACAGTCCAGGGAAAGAA  550

seq1  ACAGCCTAAGAAGGGGTAACACAGGAAGTGGGGAGGAGCTGTTGACGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTAAGAAGGGGTAACACAGGAAGTGGGGAGGAGCTGTTGACGGTT  600

seq1  CCTTCACCATAAAGAGAAGAGACAAGCCACGGAGGAGGAGGAGGAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACCATAAAGAGAAGAGACAAGCCACGGAGGAGGAGGAGGAGGAGG  650

seq1  GGGGGA  656
      ||||||
seq2  GGGGGA  656