BAC Information

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BAC

Clone NameB6Ng01-170L07
Chromosome1 (Build37)
Map Location 112,783,169 - 112,784,350
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh7, LOC100041429, EG626652
Downstream geneCdh19, EG666578, Dsel, LOC547247
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170L07.bB6Ng01-170L07.g
ACCDH961351DH961352
length1,0501,157
definitionDH961351|Mus musculus domesticus DNA, BAC clone: B6Ng01-170L07, 5' end.DH961352|Mus musculus domesticus DNA, BAC clone: B6Ng01-170L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggagtaccaaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacatccctgaga
ttccacctcacgcccgtcagaatggctaagatcaaaaattaatctgacag
cagttgctggcgaggatgtggaaaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaattagtctggcggttcctc
agaaaattgaacatagtactactgaagtatcctgcaatacctctcctggg
aatatatccagaagatgttccaactagtaagaaggacacatgttccacta
tgttcatagcagccttctttataatagccagaagctggaaagaacccaga
tgtcccccaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttattaaattcctaggca
aatggatggacctggagggcatcatccagagtgaggtaacccaatcacaa
aggaactcacacaatatgtactcactgataaatagatattagcccagaaa
ctttggatacccaagatataagatacaatttgctaaatgcatgaaattca
agaagaatgaagaccaaagtgtggacactttgccccttcttagaaatggg
aacaaaatacccatggaaggagttacagagagaaaattcggagctgtgac
gaaaggatggaccatctagtgattgccatatccagggatccaccccataa
tcaatttccaaatgctgacaccattgcatacactaacaagatttgctgaa
acgacccagatatagctgtctcttgtgagactatgctggggcctagcaaa
cacagaagtggatgatcacagtcagctatggatggatcacaggccctgat
ggatgagctagagaagtacccaagagctaaagggaatgcatccctatagt
ggaacaacatatcaactaaccagtacccggagctcttgttcttagctgct

gaattcattgttaaatcctaatgagaatatctgttgcttattttctacga
gctggcaaatatttcagataaatataaaagaaggaaattcataatatctg
tcccacgaatggcttaagttttaataatggaaggaaaaagaaactacata
cttttatactattatttattattatgaagctaagtggtgtgcattcttaa
gcataggcaaagtaagtactactaaaagtaaattagtagtcagcgtgtct
tgctaagtaaatcatcactgatgagatacaaactatgaggagataagaat
aagaggaaagatttgaagaaggtattgatatgacattatgagactcaaca
gtgagagaaagaaagaataccatgtgtaagtaaagacagagtgataaatg
ctgaatggctcagaacatagttgcttattgtcataggtgttaagaagctt
tgggaacactccttgtaagaaaaagaaggattagtatcacaataccataa
attagatgctagcatgatgctatgtcattgactgagtcattaggtttggt
cactatctacatagtgtttttatttttcaccttattgtctattctccatt
ataatgaagcgaataaggaaattcagctttttctatagattataaattga
ggttcataaagattagatgggtcctcaagttcacagttatgtaaattaaa
gtaaattatctcacactcatatcaagtggcagaaaattattctgagaaac
ttagtgctgcttatataatttgatttctattattaactttaagtattgct
tattttaaagaattgctattagaaactttctatataagattgagagttgg
atgaagagcttattaatataaaattggaacatatgtataaccacattaat
ttagtgttattaaactattcaaaaatcaggaatgtattcaacatagtaaa
catgaatttttgcagcacttgtgattatgagaaaatatacactactaata
ctgtttattattgttctaagatttatgaatattagtattaagcatacaaa
tagaaatcactctgtaggatgatgaaaatttacatattttacataaatat
caatgatattcatttttgatgtatctttatggacagctgatacatacaat
gcagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112783169_112784350
seq2: B6Ng01-170L07.g_67_1223

seq1  GAATTCATTGTTAAATCCTAATGAGAATATCTGTTGCTTATTTTCTACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTAAATCCTAATGAGAATATCTGTTGCTTATTTTCTACGA  50

seq1  GCTGGCAAATATTTCAGATAAATATAAAAGAAGGAAATTCATAATATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAATATTTCAGATAAATATAAAAGAAGGAAATTCATAATATCTG  100

seq1  TCCCACGAATGGCTTAAGTTTTAATAATGGAAGGAAAAAGAAACTACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGAATGGCTTAAGTTTTAATAATGGAAGGAAAAAGAAACTACATA  150

seq1  CTTTTATACTATTATTTATTATTATGAAGCTAAGTGGTGTGCATTCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATACTATTATTTATTATTATGAAGCTAAGTGGTGTGCATTCTTAA  200

seq1  GCATAGGCAAAGTAAGTACTACTAAAAGTAAATTAGTAGTCAGCGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGCAAAGTAAGTACTACTAAAAGTAAATTAGTAGTCAGCGTGTCT  250

seq1  TGCTAAGTAAATCATCACTGATGAGATACAAACTATGAGGAGATAAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGTAAATCATCACTGATGAGATACAAACTATGAGGAGATAAGAAT  300

seq1  AAGAGGAAAGATTTGAAGAAGGTATTGATATGACATTATGAGACTCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAAGATTTGAAGAAGGTATTGATATGACATTATGAGACTCAACA  350

seq1  GTGAGAGAAAGAAAGAATACCATGTGTAAGTAAAGACAGAGTGATAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGAAAGAAAGAATACCATGTGTAAGTAAAGACAGAGTGATAAATG  400

seq1  CTGAATGGCTCAGAACATAGTTGCTTATTGTCATAGGTGTTAAGAAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGGCTCAGAACATAGTTGCTTATTGTCATAGGTGTTAAGAAGCTT  450

seq1  TGGGAACACTCCTTGTAAGAAAAAGAAGGATTAGTATCACAATACCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACACTCCTTGTAAGAAAAAGAAGGATTAGTATCACAATACCATAA  500

seq1  ATTAGATGCTAGCATGATGCTATGTCATTGACTGAGTCATTAGGTTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGCTAGCATGATGCTATGTCATTGACTGAGTCATTAGGTTTGGT  550

seq1  CACTATCTACATAGTGTTTTTATTTTTCACCTTATTGTCTATTCTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCTACATAGTGTTTTTATTTTTCACCTTATTGTCTATTCTCCATT  600

seq1  ATAATGAAGCGAATAAGGAAATTCAGCTTTTTCTATAGATTATAAATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAAGCGAATAAGGAAATTCAGCTTTTTCTATAGATTATAAATTGA  650

seq1  GGTTCATAAAGATTAGATGGGTCCTCAAGTTCACAGTTATGTAAATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATAAAGATTAGATGGGTCCTCAAGTTCACAGTTATGTAAATTAAA  700

seq1  GTAAATTATCTCACACTCATATCAAGTGGCAGAAAATTATTCTGAGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTATCTCACACTCATATCAAGTGGCAGAAAATTATTCTGAGAAAC  750

seq1  TTAGTGCTGCTTATATAATTTGATTTCTATTATTAACTTTAAGTATTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTGCTTATATAATTTGATTTCTATTATTAACTTTAAGTATTGCT  800

seq1  TATTTTAAAGAATTGCTATTAGAAAC-TTCTATATAAGATTGAGAGTTGG  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATTTTAAAGAATTGCTATTAGAAACTTTCTATATAAGATTGAGAGTTGG  850

seq1  ATGAAGAGCTTATTAATATAAAATTGGAACATATGTATAACCACATTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGCTTATTAATATAAAATTGGAACATATGTATAACCACATTAAT  900

seq1  TTAGGTGTTATTAAACTATTCAAAAATCAGGGAATGTATTCAACATAGTA  949
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTA-GTGTTATTAAACTATTCAAAAATCA-GGAATGTATTCAACATAGTA  948

seq1  AACATGAATTTTTGCAGCACTTGTGATTAATGAGAAAATATACAACTACT  999
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AACATGAATTTTTGCAGCACTTGTGATT-ATGAGAAAATATAC-ACTACT  996

seq1  AATACTGTTTATTATTGTTTCTAAGATTTTATGAATTATTAGTTATTAAA  1049
      ||||||||||||||||| |||||||| |||||||| |||||| |||||| 
seq2  AATACTGTTTATTATTG-TTCTAAGA-TTTATGAA-TATTAG-TATTAA-  1041

seq1  GGTATACAATATTAGATATCACTCTGTAGGATGATGAAAATTTTACATAT  1099
       | |||||  | |||| ||||||||||||||||||||||| |||||||||
seq2  -GCATACA--AATAGAAATCACTCTGTAGGATGATGAAAA-TTTACATAT  1087

seq1  TTTACTATAATTATCAATATGATTATTCCATTTTTTGAATGTATCTTTAT  1149
      ||||| |||| |||||  |||| |||| |||||||   ||||||||||| 
seq2  TTTAC-ATAAATATCA--ATGA-TATT-CATTTTT--GATGTATCTTTA-  1129

seq1  TGGACAATCTTATCACTATACAAATTGCAGTGT  1182
      ||||| | || || || ||||||  ||||||||
seq2  TGGAC-AGCTGAT-AC-ATACAA--TGCAGTGT  1157