MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-170P15
Chromosome	1 (Build37)
Map Location	8,163,562 - 8,164,740
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Pcmtd1, LOC545302, LOC665063, LOC665069, LOC100039408
Downstream gene	Sntg1, LOC100039474, LOC620444, EG665007, LOC665103
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pcmtd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319263 MGI:2441773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545302
definition	note : adenosylhomocysteinase pseudogene pseudo : _no_value

name	LOC665063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Sntg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71096 MGI:1918346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 117 ESTs, 4 Proteins

name	LOC620444 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG665007 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665007 MGI:3644942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665103 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 5 Proteins pseudo : _no_value

name	Pcmtd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111186469 GeneID:319263 MGI:2441773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 transcript_id : NM_183028.2

name	Sntg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140971304 GeneID:71096 MGI:1918346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntrophin, gamma 1 transcript_id : NM_027671.4

name	LOC100039474 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233594 GeneID:100039474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 117 ESTs, 4 Proteins product : similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2) transcript_id : XM_001472887.1

name	Sntg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560093 GeneID:71096 MGI:1918346
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : syntrophin, gamma 1 protein_id : NP_081947.2

name	LOC100039474 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233595 GeneID:100039474
definition	codon_start : 1 product : similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2) protein_id : XP_001472937.1

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 1 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 2 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 3 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 4 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 5 pseudo : _no_value

name	LOC665069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665069
definition	number : 1 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 5 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 4 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 3 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 2 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 1 pseudo : _no_value

name	LOC620444 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620444
definition	number : 1 pseudo : _no_value

name	EG665007 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665007
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128795
definition	standard_name : D1Mit428

name	(CDS detail)
type	STS
link
xref	UniSTS:128796
definition	standard_name : D1Mit428.2

name	(CDS detail)
type	STS
link
xref	UniSTS:122890
definition	standard_name : 07.MMHAP53FLC1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:186238
definition	standard_name : M-11219

name	(CDS detail)
type	STS
link
xref	UniSTS:128924
definition	standard_name : D1Mit65

name	(CDS detail)
type	STS
link
xref	UniSTS:207122
definition	standard_name : BB175276

name	(CDS detail)
type	STS
link
xref	UniSTS:123774
definition	standard_name : 27.MMHAP17FA6.seq

name	LOC665103 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233596 GeneID:665103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 5 Proteins product : similar to Translocase of inner mitochondrial membrane 23 homolog (yeast) pseudo : _no_value transcript_id : XR_030934.1

clone name	MSMg01-524K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-169P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-045P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284J17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-170P15.b	B6Ng01-170P15.g
ACC	DH961557	DH961558
length	1,261	1,173
definition	DH961557\|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P15, 5' end.	DH961558\|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P15, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctggga ttccacctcagaccagtcagaatggctaagatcaaaaattcaggtgacag cagatgctggcatggatgtggaaaaagaggaacactcctccattgttggt gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc agaaaattggacatagtactaccggaggatccagcaatacctctcctggg catatatccagaagatgccccaactggtaagaaagtaatctttcaactga cctaaaaaaaaaaaaagaaaaaaaaaaaaagtctcatgaacagaattcca aatctaacaacaacaacaacaaaataattggaagcaacaattgcaacaat tgcttttccttaatatagcttaatatcaatggatttaattccccaataaa aagatatagactaacaaattggctatgtaaataggacccaacaatttgct gcatacaggaaacctacttcagggacaaagaaatacattacctcagagtc aaaggctagaaaacaattttccaagcaagggatcctggaaacaatctgga gtagcctttctaatattgaataaaatcatctttcaatctaaagttatcaa aaaagataaggagagacacctcatactcatcaaatataaaacctgcaaag atgaaacctcaattctgaacatacatgttccaaatgcaagagcatccata ttcataagagaaactttgctaaacctcaaagcacacattgcactgcatac aataatagtgggcagaattcaacactgtgctctcactaatggacagatcc tggaaacagaatctaaacagagacacagtgaaaccaacagaagttatgaa acaaatggatttaacagatatctacagaacatttcacactaaaacaaaag gattcatattcttctcagcaccttatggtaccttctccaaatggaccatt tattggtcacaaaacagggcctccaaagaaacaaaatattggaattattc catggatcttatcgattacacggactaggctggtctttcaataacaacat gaaagtatataggccacatacatgtggggaagcgtgaacaagactctcac tcagtgatagctcctggatggattgggaggagttagagccgttttagaga gttgtgagtcg	gaattccatggtcaattcaatcagaaataacaactgtttatgttgtgctg tatagtgatgtgttatttaatagcaaaggttctgctaacatgtcagagtg agatttatggtgattctctaattttgcacaaaagtaatataagttaaaga ttattttaactgaaattatgtgattctttattattataatcacctatctt gtatatattatattctcctaaaataaaataatatgttcaattggagaaaa ttcttatggaaaatattgttttcaatcatactagcactaaaaatgaaaat gcctaatgaataagggtaaaattatacatgaagaataaaaatttatataa tgatgatcctttaaataatgagataaataacattttgtattacaaaagaa cacataaaatccaacattaaaaacatataactaactgatgatcattaatc atcattaattaaaatatttgaggaaaatcttaccttgtaatgtgagatgc cgataaataaataagaaggctagtatttgaaataattgtgtttggcaaat atttgtctctcctgagttttaccttattttctcattctgccaactgaacc atacacagtgaagtagctacaatttcaaccagaccatgataacaattaag aagaaatgattctcatagcagaatctctcttcttggtctttacaatggtg acaaatggatttaggtgatatttcaagttatgatcttgcatttgttgttg aaacatgtcactgtgatcacagtgtatttcctagggttcatctgagaggg ttaaaattgataggatcaagctaacattcacagccacacaggaaggaagg atctcttcattatatatctcagtagtcttgcctgaggtcctgcaaaatat cctggaaagcagtaggccatactgagggtcacatagtcacaaatttacca taaaaatatgaatgtgttaaatgaataataattttgtttgaggcaatatt tatggcaaataccaaatgtcttttgactttcagctagtaagatgcttcaa ctagactgcagaggaagtggcccttttcttcctgtgtcccaatgatcttt gcaaaacattagcctctgatacaaaattgggaaggatcaattaatttgaa atgcattccctgttctaagggca
quality values	Open. Hide. 61 41 20 30 61 53 61 43 24 61 61 61 50 47 47 61 61 35 35 55 55 61 61 55 49 12 16 12 10 10 9 13 8 10 18 24 36 24 59 59 61 59 59 59 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 23 30 35 16 18 28 22 26 32 52 44 55 59 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 55 59 61 52 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 43 59 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 55 55 52 52 52 52 36 43 52 55 61 61 55 55 55 52 61 61 61 61 61 61 55 55 55 55 55 50 50 55 55 50 43 55 50 55 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 50 53 61 61 61 61 61 61 61 52 52 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 53 53 61 61 47 61 53 52 57 57 53 57 57 53 53 47 47 53 53 57 53 57 53 57 53 53 57 57 53 53 47 38 32 32 27 38 42 53 47 53 57 57 47 50 40 57 53 45 57 57 45 45 47 47 45 53 53 53 53 53 53 53 53 47 57 53 53 53 45 57 52 41 52 34 53 53 53 53 57 57 47 50 45 53 53 45 37 32 25 32 30 37 53 53 53 42 53 52 43 45 47 42 53 50 57 57 52 57 46 47 30 53 57 42 53 57 53 47 38 52 53 42 52 46 37 53 50 45 41 35 57 53 50 52 57 53 52 57 37 38 57 57 47 37 42 40 53 53 57 57 57 34 39 30 50 52 50 40 57 52 38 50 52 42 42 40 57 57 57 57 57 47 30 34 30 31 52 31 46 44 33 53 52 36 31 30 38 35 34 40 36 47 31 44 42 40 30 40 36 31 57 46 37 33 42 27 57 53 37 33 39 38 47 47 28 57 47 41 33 24 48 53 37 45 37 37 29 31 27 20 47 53 34 33 45 31 26 28 27 40 24 29 24 40 48 33 53 28 30 30 46 31 27 33 29 12 43 32 48 14 30 24 29 16 30 18 39 34 32 32 29 28 41 23 26 27 36 20 48 51 30 30 30 51 29 39 36 29 21 31 30 13 34 39 37 28 46 46 30 37 28 29 28 29 18 47 43 39 35 17 29 29 31 29 28 28 24 30 24 31 28 34 31 29 29 29 16 29 46 12 14 26 29 32 29 29 29 29 28 22 29 22 33 30 29 18 38 28 29 29 28 30 20 25 16 16 33 12 28 31 11 18 23 25 23 28 24 28 27 28 26 10 33 26 25 9 20 28 28 27 33 35 28 43 29 24 14 20 40 14 10 20 9 29 15 22 22 43 22 41 20 9 23 11 20 20 15 19 29 32 28 39 23 20 25 28 29 51 17 27 20 46 28 31 34 41 31 28 51 22 22 14 21 18 19 33 19 15 22 25 31 20 28 9 22 34 23 19 10 24 51 28 12 13 10 8 15 14 17 51 38 19 12 5 42 38 16 25 18 21 14 21 13 7 16 12 16 30 30 13 28 9 9 12 16 26 23 6 4 22 23 13 18 20 34 34 6 9 19 17 28 25 11 8 8 30 24 34 12 6 5 15 9 12 13 12 4 4 4 11 6 7 19 25 14 16 13 17 5 5 10 5 6 5 11 31 12 31 7 12 20 29 9 4 3 4 18 6 4 8 6 36 18 16 9 6 4 14 9 5 27 29 8 5 30 9 10 11 20 3 3 4 5 22 7 13 9 6 6 9 3 1 4 8 4 3 6 4 10 12 10 22 20 12 23 14 14 10 5 5 14 4 5 4 4 8 20 14 7 9 25 6 5 11 19 19 9 24 20 6 18 5 4 4 5 3 3 4 4 2 3 13 9 3 3 4 11 5 5 4 7 13 6 3 13 18 7 12 10 3 6 3 7 5 18 8 4 2 1 1 3 2 4 4 7 4 5 9 6 5 8 3 6 7 15 4 14 4 3 4 1 7 3 10 4 10 7 7 8 17 2 1 2 2 3 15 4 5 9 3 13 3 7 4 7 6 7 9 5 18 18 24 9 4 6 10 4 17 4 11 7 6 16 6 4 7 3 1 1	Open. Hide. 61 47 43 49 61 61 12 10 10 12 9 10 6 11 12 7 27 14 23 31 43 61 59 52 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 31 19 18 24 19 18 26 28 37 37 55 44 59 61 59 61 61 59 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 61 59 59 61 59 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 53 53 53 53 61 53 61 61 53 61 53 61 61 61 42 61 61 61 61 57 53 57 53 52 57 57 57 57 57 53 47 31 53 53 53 53 47 47 47 47 46 53 53 53 53 53 53 57 53 57 57 53 43 53 53 53 53 53 53 53 38 53 57 53 53 43 30 53 53 47 38 50 57 46 47 43 53 53 39 38 53 32 53 28 53 57 41 36 57 45 57 43 26 47 33 38 43 57 41 29 57 52 53 52 50 50 41 47 45 53 38 57 39 45 45 53 42 57 45 52 35 33 53 37 46 53 42 50 41 53 53 33 53 36 52 37 47 46 52 53 37 30 23 53 53 40 57 46 30 24 57 53 44 52 31 30 53 39 28 53 38 46 41 29 38 52 53 52 39 47 52 53 53 40 42 52 53 42 40 30 40 53 40 47 38 39 41 22 57 36 40 47 43 37 23 39 52 37 36 30 34 40 40 31 37 33 40 30 24 39 35 47 23 53 32 41 31 53 35 27 37 27 29 27 57 45 29 36 32 25 41 27 37 39 53 30 53 9 57 45 24 31 41 57 39 30 26 37 36 30 35 36 24 30 28 27 32 17 29 30 41 31 26 29 30 26 30 18 32 27 30 17 29 18 34 14 39 14 32 23 23 24 31 26 16 31 33 31 39 29 28 28 28 29 31 29 33 28 27 24 29 35 34 34 29 24 29 23 29 28 33 13 26 36 23 37 29 23 18 17 9 29 27 30 32 32 12 46 7 19 29 29 24 13 46 46 37 21 25 29 23 27 15 25 25 41 51 41 31 29 29 23 20 33 7 46 10 26 21 29 18 27 8 12 6 5 5 14 25 25 8 8 15 29 8 12 9 23 10 8 5 5 7 10 10 29 23 31 39 31 14 12 51 51 51 10 9 11 11 19 29 11 9 21 13 31 22 16 12 51 19 16 23 24 29 10 5 12 40 14 14 20 38 51 19 16 6 38 32 20 22 6 5 8 20 16 10 16 19 51 15 14 18 15 27 17 16 32 10 15 14 12 10 15 38 6 7 10 10 26 21 38 38 6 6 14 16 34 44 26 24 23 15 23 28 17 11 27 29 15 9 13 12 29 29 19 20 22 12 17 33 12 10 14 13 20 31 34 14 7 6 13 11 21 22 14 7 5 5 5 3 4 5 3 17 29 19 3 4 8 7 21 14 8 4 13 11 9 10 19 6 8 9 4 17 5 4 11 29 16 6 9 6 36 31 17 8 10 23 20 5 20 5 5 5 10 10 15 11 8 9 4 7 20 30 23 7 8 8 21 16 13 16 4 4 4 4 6 6 6 3 3 1 4 13 5 3 3 4 19 10 10 6 5 4 15 6 14 29 20 8 16 7 9 13 5 15 10 3 17 13 7 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_8163562_8164740
seq2: B6Ng01-170P15.g_68_1240

seq1  GAATTCCATGGTCAATTCAATCAGAAATAACAACTGTTTATGTTGTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTCAATTCAATCAGAAATAACAACTGTTTATGTTGTGCTG  50

seq1  TATAGTGATGTGTTATTTAATAGCAAAGGTTCTGCTAACATGTCAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGATGTGTTATTTAATAGCAAAGGTTCTGCTAACATGTCAGAGTG  100

seq1  AGATTTATGGTGATTCTCTAATTTTGCACAAAAGTAATATAAGTTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATGGTGATTCTCTAATTTTGCACAAAAGTAATATAAGTTAAAGA  150

seq1  TTATTTTAACTGAAATTATGTGATTCTTTATTATTATAATCACCTATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAACTGAAATTATGTGATTCTTTATTATTATAATCACCTATCTT  200

seq1  GTATATATTATATTCTCCTAAAATAAAATAATATGTTCAATTGGAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATTATATTCTCCTAAAATAAAATAATATGTTCAATTGGAGAAAA  250

seq1  TTCTTATGGAAAATATTGTTTTCAATCATACTAGCACTAAAAATGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGGAAAATATTGTTTTCAATCATACTAGCACTAAAAATGAAAAT  300

seq1  GCCTAATGAATAAGGGTAAAATTATACATGAAGAATAAAAATTTATATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATGAATAAGGGTAAAATTATACATGAAGAATAAAAATTTATATAA  350

seq1  TGATGATCCTTTAAATAATGAGATAAATAACATTTTGTATTACAAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATCCTTTAAATAATGAGATAAATAACATTTTGTATTACAAAAGAA  400

seq1  CACATAAAATCCAACATTAAAAACATATAACTAACTGATGATCATTAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAAATCCAACATTAAAAACATATAACTAACTGATGATCATTAATC  450

seq1  ATCATTAATTAAAATATTTGAGGAAAATCTTACCTTGTAATGTGAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAATTAAAATATTTGAGGAAAATCTTACCTTGTAATGTGAGATGC  500

seq1  CGATAAATAAATAAGAAGGCTAGTATTTGAAATAATTGTGTTTGGCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAAATAAATAAGAAGGCTAGTATTTGAAATAATTGTGTTTGGCAAAT  550

seq1  ATTTGTCTCTCCTGAGTTTTACCTTATTTTCTCATTCTGCCAACTGAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTCTCCTGAGTTTTACCTTATTTTCTCATTCTGCCAACTGAACC  600

seq1  ATACACAGTGAAGTAGCTACAATTTCAACCAGACCATGATAACAATTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGTGAAGTAGCTACAATTTCAACCAGACCATGATAACAATTAAG  650

seq1  AAGAAATGATTCTCATAGCAGAATCTCTCTTCTTGGTCTTTACAATGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGATTCTCATAGCAGAATCTCTCTTCTTGGTCTTTACAATGGTG  700

seq1  ACAAATGGATTTAGGTGATATTTCAAGTTATGATCTTGCATTTGTTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGATTTAGGTGATATTTCAAGTTATGATCTTGCATTTGTTGTTG  750

seq1  AAACATGTCACTGTGATCACAGTGTATTTCCTAGGGTTCATCTGAGAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTCACTGTGATCACAGTGTATTTCCTAGGGTTCATCTGAGAGGG  800

seq1  TTAAAATTGATAGGATCAAGCTAACATTCACAGCCACACAGGAAGGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGATAGGATCAAGCTAACATTCACAGCCACACAGGAAGGAAGG  850

seq1  ATCTCTTCATTATATATCTCAGTAGTCTTGCCTGAGGTTCCTGCAAAATA  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCTCTTCATTATATATCTCAGTAGTCTTGCCTGAGG-TCCTGCAAAATA  899

seq1  TCCTGGAAAGCAGTAAGGCCATACTGAAGGTCACATAGGTCACATATTTA  950
      |||||||||||||| |||||||||||| ||||||||| |||||| |||||
seq2  TCCTGGAAAGCAGT-AGGCCATACTGAGGGTCACATA-GTCACAAATTTA  947

seq1  CCAT-AAAATATGAATGTGTTAAATGAAT-ATTATTTTGTTTGA-GCAAT  997
      |||| |||||||||||||||||||||||| || ||||||||||| |||||
seq2  CCATAAAAATATGAATGTGTTAAATGAATAATAATTTTGTTTGAGGCAAT  997

seq1  ATTTATGGCAAATACAAATTGTC-TTTGACTTTCAGCTAGTAAGATGCTT  1046
      ||||||||||||||| || |||| ||||||||||||||||||||||||||
seq2  ATTTATGGCAAATACCAAATGTCTTTTGACTTTCAGCTAGTAAGATGCTT  1047

seq1  CAACTAGACTGCAGAGGAAGTGGCCCCTTTTTCTTCCTGTGTCCCCATGA  1096
      ||||||||||||||||||||||||||  ||||||||||||||||| ||||
seq2  CAACTAGACTGCAGAGGAAGTGGCCC--TTTTCTTCCTGTGTCCCAATGA  1095

seq1  TCTTTGCCAAAAACATTAGGCCTCTGATACAAAATTGGGAAAGTATCATT  1146
      |||||||  ||||||||| |||||||||||||||||||| ||| |||| |
seq2  TCTTTGC--AAAACATTA-GCCTCTGATACAAAATTGGG-AAGGATCAAT  1141

seq1  GTATTTGTAATGCATTCCCTGTCTAAAAGGGCA  1179
        ||||| |||||||||||||| |  |||||||
seq2  TAATTTGAAATGCATTCCCTGT-TCTAAGGGCA  1173

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information