BAC Information

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BAC

Clone NameB6Ng01-171M22
Chromosome1 (Build37)
Map Location 159,441,733 - 159,442,701
singlet/doubletsinglet
Overlap geneLztr2
Upstream geneLOC100039026, Abl2, Tor3a, C530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585
Downstream geneLOC664935, LOC100039217, 6430517E21Rik, Astn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171M22.bB6Ng01-171M22.g
ACCGA000591GA000592
length1,043971
definitionB6Ng01-171M22.b B6Ng01-171M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttttagatttgtaccctgtttttaaattaggctgttttcttga
tgtcaggtttttgagttctttatatattttaggtattatacctctatgaa
tgtgtagctgataaaaatattttccattctgtaccctgaactttgccata
caggagcttttcagtctcttgagggtctgcttttattgttgttcttagtg
acattgctattggtgtcttgctcatgaagtctttttgcctatgccagtga
cttcaagactgttactgtgttctattttatttgattgaattttgtgcagg
gtgttaagtatggaactacttgcattctaccacatgcagccatccatttg
gaccagcaccatttgttaaagatgctatcttgttccagtgtacatttctg
gcttcttaattaaaaatctggtacccagagttgtgtggatttacatctga
gtcttcaattcaattccattgattaacatgtctacttttaagtgtgtagc
ttggtcttcatttgagtcccaaacaactggagcagtagctatcccaaaag
ctgttccctgtacgtgggatatgttcttccagctgggttgccttatctgg
cctaggtggaagaggccgcacctagccttagagagtcttgatgtgccaga
gccaggggatactcatgggagaccccacccactcagaggagaaggggaca
agggatggagggaaggattgtggaaagggatgaccaggaggggggcaatg
agcaggatgaaaagtgagtaagtaaaaaaaaaaaaatattttttttttaa
aaaagcagataccagaagttaaaatatttgggtttaattactaattaaat
cattgtattttatgctagtagtaccgatgatttgatgattattaatttat
agttaatattaaagtggtgggaaaaaaaaaacatggctacttatattgcc
agtacatggtgattgttactacaactatgttgatacctccagcagtcttt
attaagtcagataatttcagatcctggattttctgtgttccat
gaattcacagttcctgtccttacctaataactagggagtaagtgcctctt
acatgccgagttaagccacataaagagaacaaggtgaacttactccttgt
attcttggagtttactggtgtctcaggttctctattgccatgatgaaacg
ccatgaccaaaagcagtttggggaaggaagggtttaactgtaatttgtgt
taagtgtaatttggcttacacttctacatcatagtccatcattaaaggaa
gtcaggacaggaactcaaataggacaggaactggagacaggagctgatgc
agaggtcacgaggtgaggggtgcttcttactggcttgttcctcatggagc
tcagtctttcttatagaacccaggaccaccagcccagggactgcaccacc
cacagtgagctggtccctccctcatcaatcactaattaagaaaatgcctt
acagctggatcttacagaggcgttttctcaactgagactctctcctctct
cgtgactgtagtttgtgtcaagttgacattaaacttagccaagacaacta
tctaatggggacacagacaaattagttacaatggtgtgtatggggaatga
gagtatgaagcaagtgaaatccattatgaaggagccacactcagtcaaag
aaagcttttcaaaagaaaagcagctgcaactgagacctgcaaactaagag
tgcaccatcctggaagtaggtgaaagagacaagtgtgctccggcgagaac
ggtgaacactggaaaaagattcttaggcaaaggaaagcctagggcacaac
agtcacagtcagtggcataggtcatagacgtgatgattggagagcctaga
acataaagagcagcactgacagttaaggccacccagcccatcctagctgc
ctcactcagcctcacagaaagttatgtagccccacctcttccaagaacct
ggggtgtggattttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159441733_159442701
seq2: B6Ng01-171M22.g_65_1035 (reverse)

seq1  ACAAAAAAAAACCCACA-CCCAGG-TCTTGGGAGAGGTGGGGCTACATAC  48
      | ||||||||| ||||| |||||| |||||| ||||||||||||||||| 
seq2  AAAAAAAAAAATCCACACCCCAGGTTCTTGGAAGAGGTGGGGCTACATAA  50

seq1  CTTTCTGTGAGGCTGAGTGAGGCAGCTAGGATGGGCTGGGTGGCTTTAAC  98
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTCTGTGAGGCTGAGTGAGGCAGCTAGGATGGGCTGGGTGGCCTTAAC  100

seq1  TGTCAGTGCTGCTCTTTATGTTCTAGGCTCTCCAATCATCACGTCTATGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTGCTGCTCTTTATGTTCTAGGCTCTCCAATCATCACGTCTATGA  150

seq1  CCTATGCCACTGACTGTGACTGTTGTGCCCTAGGCTTTCCTTTGCCTAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCCACTGACTGTGACTGTTGTGCCCTAGGCTTTCCTTTGCCTAAG  200

seq1  AATCTTTTTCCAGTGTTCACCGTTCTCGCCGGAGCACACTTGTCTCTTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTCCAGTGTTCACCGTTCTCGCCGGAGCACACTTGTCTCTTTC  250

seq1  ACCTACTTCCAGGATGGTGCACTCTTAGTTTGCAGGTCTCAGTTGCAGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTCCAGGATGGTGCACTCTTAGTTTGCAGGTCTCAGTTGCAGCT  300

seq1  GCTTTTCTTTTGAAAAGCTTTCTTTGACTGAGTGTGGCTCCTTCATAATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTTTTGAAAAGCTTTCTTTGACTGAGTGTGGCTCCTTCATAATG  350

seq1  GATTTCACTTGCTTCATACTCTCATTCCCCATACACACCATTGTAACTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCACTTGCTTCATACTCTCATTCCCCATACACACCATTGTAACTAA  400

seq1  TTTGTCTGTGTCCCCATTAGATAGTTGTCTTGGCTAAGTTTAATGTCAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTGTCCCCATTAGATAGTTGTCTTGGCTAAGTTTAATGTCAAC  450

seq1  TTGACACAAACTACAGTCACGAGAGAGGAGAGAGTCTCAGTTGAGAAAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACAAACTACAGTCACGAGAGAGGAGAGAGTCTCAGTTGAGAAAAC  500

seq1  GCCTCTGTAAGATCCAGCTGTAAGGCATTTTCTTAATTAGTGATTGATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTAAGATCCAGCTGTAAGGCATTTTCTTAATTAGTGATTGATGA  550

seq1  GGGAGGGACCAGCTCACTGTGGGTGGTGCAGTCCCTGGGCTGGTGGTCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGACCAGCTCACTGTGGGTGGTGCAGTCCCTGGGCTGGTGGTCCT  600

seq1  GGGTTCTATAAGAAAGACTGAGCTCCATGAGGAACAAGCCAGTAAGAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTATAAGAAAGACTGAGCTCCATGAGGAACAAGCCAGTAAGAAGC  650

seq1  ACCCCTCACCTCGTGACCTCTGCATCAGCTCCTGTCTCCAGTTCCTGTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCACCTCGTGACCTCTGCATCAGCTCCTGTCTCCAGTTCCTGTCC  700

seq1  TATTTGAGTTCCTGTCCTGACTTCCTTTAATGATGGACTATGATGTAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGTTCCTGTCCTGACTTCCTTTAATGATGGACTATGATGTAGAA  750

seq1  GTGTAAGCCAAATTACACTTAACACAAATTACAGTTAAACCCTTCCTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGCCAAATTACACTTAACACAAATTACAGTTAAACCCTTCCTTCC  800

seq1  CCAAACTGCTTTTGGTCATGGCGTTTCATCATGGCAATAGAGAACCTGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGCTTTTGGTCATGGCGTTTCATCATGGCAATAGAGAACCTGAG  850

seq1  ACACCAGTAAACTCCAAGAATACAAGGAGTAAGTTCACCTTGTTCTCTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGTAAACTCCAAGAATACAAGGAGTAAGTTCACCTTGTTCTCTTT  900

seq1  ATGTGGCTTAACTCGGCATGTAAGAGGCACTTACTCCCTAGTTATTAGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTTAACTCGGCATGTAAGAGGCACTTACTCCCTAGTTATTAGGT  950

seq1  AAGGACAGGAACTGTGAATTC  969
      |||||||||||||||||||||
seq2  AAGGACAGGAACTGTGAATTC  971