MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-172K02
Chromosome	1 (Build37)
Map Location	124,178,988 - 124,180,174
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Insig2, Ccdc93, LOC100041926, Htr5b, LOC666656, Ddx18, LOC666971
Downstream gene	LOC666983
Link	Open Mouse BAC browser

Click to get alignment info.

name	Insig2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72999 MGI:1920249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ccdc93 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70829 MGI:1918079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100041926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	Htr5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15564 MGI:96284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666656 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Ddx18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66942 MGI:1914192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666971 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC666983 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Insig2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526953 GeneID:72999 MGI:1920249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 2 transcript_id : NM_133748.1

name	Insig2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342571 GeneID:72999 MGI:1920249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 2 transcript_id : NM_178082.2

name	Ccdc93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68448541 GeneID:70829 MGI:1918079
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 93 transcript_id : NM_001025156.1

name	Ccdc93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352460 GeneID:70829 MGI:1918079
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 93 transcript_id : NM_027567.2

name	Ccdc93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371535 GeneID:70829 MGI:1918079
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 93 transcript_id : NM_029955.2

name	LOC100041926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234241 GeneID:100041926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to low molecular mass ubiquinone-binding protein transcript_id : XM_001477223.1

name	Htr5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475921 GeneID:15564 MGI:96284
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 5B transcript_id : NM_010483.2

name	Ddx18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981162 GeneID:66942 MGI:1914192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 transcript_id : NM_025860.2

name	Insig2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526954 CCDS:CCDS15236.1 GeneID:72999 MGI:1920249
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 product : INSIG-2 membrane protein protein_id : NP_598509.1

name	Insig2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017389 CCDS:CCDS15236.1 GeneID:72999 MGI:1920249
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 product : INSIG-2 membrane protein protein_id : NP_835183.1

name	Ccdc93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68448542 CCDS:CCDS15237.1 GeneID:70829 MGI:1918079
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1 product : coiled-coil domain containing 93 isoform a protein_id : NP_001020327.1

name	Ccdc93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539631 GeneID:70829 MGI:1918079
definition	codon_start : 1 exception : mismatches in translation note : isoform b is encoded by transcript variant 2 product : coiled-coil domain containing 93 isoform b protein_id : NP_081843.1

name	Ccdc93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539651 CCDS:CCDS15238.1 GeneID:70829 MGI:1918079
definition	codon_start : 1 exception : mismatches in translation note : isoform c is encoded by transcript variant 3 product : coiled-coil domain containing 93 isoform c protein_id : NP_084231.1

name	LOC100041926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234242 GeneID:100041926
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477273.1

name	Htr5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754260 CCDS:CCDS15239.1 GeneID:15564 MGI:96284
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : 5-hydroxytryptamine (serotonin) receptor 5B protein_id : NP_034613.1

name	Ddx18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981163 CCDS:CCDS15240.1 GeneID:66942 MGI:1914192
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein_id : NP_080136.2

name	LOC666656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666656
definition	number : 1 pseudo : _no_value

name	LOC666971 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666971
definition	number : 1 pseudo : _no_value

name	LOC666983 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666983
definition	number : 3 pseudo : _no_value

name	LOC666983 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666983
definition	number : 2 pseudo : _no_value

name	LOC666983 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666983
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:272505
definition	standard_name : PMC303355P2

name	(CDS detail)
type	STS
link
xref	UniSTS:113660
definition	standard_name : AU027072

name	(CDS detail)
type	STS
link
xref	UniSTS:167280
definition	standard_name : AU022885

name	(CDS detail)
type	STS
link
xref	UniSTS:234201
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158843
definition	standard_name : AA959903

name	(CDS detail)
type	STS
link
xref	UniSTS:143429
definition	standard_name : Htr5b

name	(CDS detail)
type	STS
link
xref	UniSTS:178452
definition	standard_name : X69867

name	(CDS detail)
type	STS
link
xref	UniSTS:235514
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123980
definition	standard_name : 32.MMHAP32FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:333685
definition	standard_name : REN8885

name	(CDS detail)
type	STS
link
xref	UniSTS:158841
definition	standard_name : 38.MMHAP85FLE5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158842
definition	standard_name : C76132

name	(CDS detail)
type	STS
link
xref	UniSTS:128701
definition	standard_name : D1Mit343

name	(CDS detail)
type	STS
link
xref	UniSTS:128700
definition	standard_name : D1Mit342

name	(CDS detail)
type	STS
link
xref	UniSTS:128838
definition	standard_name : D1Mit471

name	(CDS detail)
type	STS
link
xref	UniSTS:125387
definition	standard_name : MHAa84f0.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:162379
definition	standard_name : RH125565

name	(CDS detail)
type	STS
link
xref	UniSTS:225105
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123313
definition	standard_name : 16.MMHAP63FLF1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123385
definition	standard_name : 18.MMHAP54FLF3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128813
definition	standard_name : D1Mit444

clone name	MSMg01-279M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227O10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-172K02.b	B6Ng01-172K02.g
ACC	GA001195	GA001196
length	1,183	1,174
definition	B6Ng01-172K02.b	B6Ng01-172K02.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaccacgtctctccacagaccggatgatcaagtaagctctttggc tttggcattgctttctagccagaaaggctaggtaagcattattctggact tatccaggaggaatacttgggctcccccgggttctagtgtgattagcgta tgccctacttttccatcatacatttcctggaatgctattattttccttag aaaagagaattctcactctgaccaggcagaattgaatagagtcaaagttt caaagcctgctaacatgagctgtgcgaagataaaatatgtgcatcatcat ttagaaaaggaatcagactgcatctctgcagaacatttgctttcacacaa aggtaagaatgattatgagcctctgctgttactcactgccagtaatgaac caatgtccctagagtctggactgacatgagtgttcagtttctgctactga acacttgagctctgggagatataactctcttttcctctgtaggcattcac atcttcatgtacaaacataggtacatgagagaaagagacatagagacaga gacaggagggaatgacaaaggtaggatagataaggaaagagaaaaacata tgcctgacatattttaaactgtctttttaaaagaaagatactacagttca gagaacaaacaaaagttctaaacgtaggtggaagctatgttctatagaaa ctgggcaagataaaccacaattacgtaagtaaaaactatagtatattatt attttatatacatagtgtcaactgtgtattaaaacaaaacagataaggag aaaagaaaggaagatcatgtcaggtcaaggtgatgtttacaatgtcaaaa agctttctttggaggtgatatatttttattgttatttttaatctgtttta agacaggagtctgactgtagcccttgtctgggcctcccaccctagatgtt cccattgagacaaatagatcatccccaaatcctttgtactcttctgatac agcatgtagcagagcattgtcttgttgcatggggtcctttccgtgttgca gaacgagagaaagattgaaactttctttctagtgaggacggagcagggtt ggtagagggagagttcatctggtaatgacactcttaggactaccagtcat gcaactctggacacaatggtatttagaaggcct	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagaagccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaaactggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc taggatacccacgatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agctttccaaatgctgacaccgttgcatacactagcaagattttactgaa aggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaa cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc aatggaggagctagagaaagtaccaaagagctaagggatcttcaacctat agtgaacacattatgactaaacagtaccctgagctctgactctagctgca atatgtattcaaaagatgcctagtcggcatcacttgtaaagaagagccca attgaccgcagaccttggtgtccggtacaggtacgcaggtcaatgggcga atgggtgtgatcagacactatagc
quality values	Open. Hide. 62 35 27 31 62 37 19 62 41 32 62 62 62 62 62 62 62 62 59 13 62 44 62 59 62 62 62 62 59 59 62 59 49 39 30 34 27 27 27 28 31 35 43 49 49 49 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 59 59 54 35 43 54 43 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 54 48 58 58 58 58 58 58 58 54 52 58 58 54 45 54 52 58 58 54 42 58 58 58 58 47 58 58 54 58 58 58 41 54 54 58 53 58 58 54 54 58 54 52 58 58 53 58 58 58 58 53 58 40 58 58 58 58 54 54 50 58 58 58 58 58 58 58 58 51 50 50 58 53 53 58 58 49 50 58 58 51 58 58 51 51 58 58 58 58 53 40 51 58 58 46 58 58 58 52 53 39 52 53 53 52 51 47 54 58 58 50 53 50 58 32 58 49 46 36 58 58 48 50 58 58 58 42 50 58 52 53 51 58 58 49 50 51 53 20 49 52 58 49 46 58 35 51 51 52 53 58 58 54 52 50 51 53 54 50 58 58 25 35 52 54 54 51 49 36 49 47 39 24 32 54 38 44 44 44 51 44 54 49 52 38 53 40 53 31 52 42 53 31 54 54 54 37 53 45 45 45 53 53 29 52 42 45 53 37 42 52 41 51 33 54 54 37 45 53 53 53 42 42 31 53 53 41 37 54 31 34 26 42 47 37 53 40 53 41 45 42 47 41 53 53 41 46 21 46 52 53 52 24 34 37 33 29 33 13 51 32 32 52 49 49 51 31 53 53 34 24 38 31 51 32 27 28 39 35 32 42 31 36 8 10 10 6 25 30 43 30 33 27 31 31 23 45 25 51 31 31 31 34 35 26 51 32 31 28 46 47 48 42 31 31 31 47 20 33 34 47 32 25 32 43 22 31 15 30 43 31 26 31 31 31 48 48 48 42 29 31 30 41 20 26 31 31 46 47 48 32 21 32 26 35 32 41 29 47 47 24 12 22 25 29 24 32 34 38 36 18 31 31 26 26 38 27 29 30 21 34 32 19 48 17 25 21 31 21 29 16 18 48 14 29 22 32 31 44 25 18 25 44 31 26 34 21 30 27 31 15 33 10 38 21 24 20 30 31 34 17 32 13 17 34 20 23 32 18 20 31 34 29 32 32 37 37 16 4 20 27 21 15 25 9 32 9 11 10 12 25 26 30 17 32 32 32 32 34 21 19 25 17 32 32 24 21 32 27 34 27 17 25 8 28 11 16 18 28 5 5 8 13 21 12 24 8 28 24 24 24 24 28 38 34 25 16 11 13 15 40 13 18 10 5 4 6 6 21 19 19 24 12 16 3 3 3 3 5 13 4 15 34 17 5 3 3 7 7 13 22 6 6 17 28 6 6 12 29 12 10 9 19 5 6 3 9 4 13 6 3 3 6 20 8 18 14 7 26 11 3 5 8 6 1 3 5 24 9 28 9 8 4 5 4 7 6 9 5 15 17 10 9 6 15 5 3 1 5 2 5 5 10 11 20 15 25 5 7 6 8 4 13 4 7 7 2 2 3 4 13 7 3 1 9 7 1 2 3 2 4 4 18 4 4 4 11 13 1 5 13 5 4 5 5 9 4 5 8 4 2 1 3 5 15	Open. Hide. 62 49 51 47 62 62 62 47 43 62 62 62 51 43 22 28 24 25 39 38 24 31 28 56 56 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 62 62 62 59 62 62 59 56 43 43 38 43 56 59 62 54 54 59 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 59 59 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 54 54 54 54 62 62 62 62 59 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 54 54 58 58 49 45 58 58 58 58 58 52 58 54 58 58 58 58 58 58 58 58 58 58 58 48 58 58 58 41 49 46 58 58 58 58 58 54 58 58 58 54 58 50 58 58 58 58 58 54 54 58 58 52 54 58 51 34 58 58 58 51 51 49 48 47 51 51 49 58 58 58 58 58 52 58 58 58 58 58 49 40 52 58 54 58 49 54 47 30 47 45 58 58 47 58 58 51 37 58 44 46 40 40 43 58 51 58 54 58 52 53 53 49 58 49 51 32 52 51 39 58 51 58 51 50 58 51 44 33 46 53 51 51 46 58 54 49 49 43 47 58 49 50 58 53 58 58 58 58 50 39 51 50 49 32 51 29 50 58 50 58 40 58 58 41 58 53 39 40 41 52 51 52 51 49 51 54 21 28 47 27 50 40 40 40 26 32 50 27 52 41 54 54 39 37 38 19 54 54 40 52 39 42 44 27 40 42 40 54 51 52 34 53 44 30 27 47 42 52 47 45 54 46 54 35 19 54 46 37 34 47 33 51 51 53 26 42 53 39 54 18 28 29 38 44 54 42 35 36 32 32 34 40 40 25 28 26 45 31 26 33 32 47 32 31 31 32 53 24 31 23 40 43 43 25 40 19 34 42 36 29 31 13 41 21 22 47 40 23 28 29 20 31 31 38 39 31 30 28 46 13 26 30 30 51 43 35 45 33 36 31 30 23 26 31 24 31 32 43 31 30 29 43 32 30 17 32 31 34 31 31 27 25 36 32 17 46 46 46 31 31 31 31 28 47 16 11 33 31 28 40 31 25 23 31 24 27 31 20 15 28 31 31 31 31 20 10 15 36 31 27 21 30 14 28 19 37 32 31 23 22 22 21 46 46 12 5 18 27 31 22 31 31 46 31 24 21 24 14 24 30 32 32 32 30 25 25 18 32 25 33 32 33 28 21 13 19 32 33 26 34 31 17 27 10 15 24 5 13 25 29 15 31 24 24 25 14 14 44 29 10 31 16 37 19 6 11 23 21 26 5 10 9 29 12 32 24 10 21 28 19 28 48 19 18 13 32 28 22 5 36 7 30 8 16 32 32 28 13 12 43 19 7 11 22 10 34 21 11 15 17 12 9 14 14 7 25 9 8 3 8 6 27 19 16 21 20 24 27 10 32 6 18 18 27 6 27 10 19 17 10 22 32 20 8 10 13 7 21 10 6 15 19 24 20 19 24 28 13 10 28 11 20 20 16 7 7 11 16 10 5 9 16 4 6 11 30 28 5 8 23 12 20 11 11 16 22 5 8 14 7 5 2 5 16 7 12 20 6 8 2 1 4 26 25 6 7 6 4 4 3 3 5 11 6 5 13 5 7 3 3 1 5 18 7 3 6 6 5 22 23 7 6 3 2 1 3 3 2 7 4 3 6 1 3 5 1 3 5 5 18 5 15 10 1 6 19 13 1 10 17 3 4 9 6 15 7 9 8 8 2 4 4 2 1 3 4 16 3 1 1 4 8 8 3 2 1 3 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_124178988_124180174
seq2: B6Ng01-172K02.b_49_1231 (reverse)

seq1  AGGCC-TCTAATTACCATTTGTTCAAGAGTTTCATGACATTGGTAAGTCC  49
      ||||| ||||| |||||||   || |||||| ||||||  |||| |||||
seq2  AGGCCTTCTAAATACCATTGTGTCCAGAGTTGCATGAC--TGGT-AGTCC  47

seq1  TAAGAGTGTCCCTTACAGATG-ACTCTCCCTTCTTCCAACCCTTGCTCTG  98
      ||||||||||  |  |||||| |||||||| ||| ||||||| ||||| |
seq2  TAAGAGTGTCATTACCAGATGAACTCTCCC-TCTACCAACCC-TGCTCCG  95

seq1  TCCTTCACTTAGAAAGAAAG-TTCATTCCTTTCTCTTCCTTCTGCAACAC  147
      ||| |||| ||||||||||| |||| | ||||||| || |||||||||||
seq2  TCC-TCAC-TAGAAAGAAAGTTTCAAT-CTTTCTC-TCGTTCTGCAACAC  141

seq1  GGAAAGGACCCCATGCAACAAGAC-ATGCTCTTGCTACATGCTGTATCAG  196
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  GGAAAGGACCCCATGCAACAAGACAATGCTC-TGCTACATGCTGTATCAG  190

seq1  AAGAGTAC-AAGGATTTGGGGGATGATCTATTTGTCTCAAT-GGAACATC  244
      |||||||| |||||||| ||||||||||||||||||||||| ||||||||
seq2  AAGAGTACAAAGGATTT-GGGGATGATCTATTTGTCTCAATGGGAACATC  239

seq1  TAGGGTGGGAGG-CCAGACAA-GGCTACAGTCAGACTCCTGTCTTAAAAC  292
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  TAGGGTGGGAGGCCCAGACAAGGGCTACAGTCAGACTCCTGTCTTAAAAC  289

seq1  AGATTAAAAATAACAATAAAAATATATCACCTCCAAAGAAAGCTTTTTGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAAATAACAATAAAAATATATCACCTCCAAAGAAAGCTTTTTGA  339

seq1  CATTGTAAACATCACCTTGACCCTGACATGATCTTCCTTTCTTTTCTCCT  392
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATTGTAAACATCACCTTGA-CCTGACATGATCTTCCTTTCTTTTCTCCT  388

seq1  TATCTGTTTTGTTTTAATACACAGTTGACACTATGTATATAAAATAATAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTTTGTTTTAATACACAGTTGACACTATGTATATAAAATAATAA  438

seq1  TATACTATAGTTTTTACTTACGTAATTGTGGTTTATCTTGCCCAGTTTCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTATAGTTTTTACTTACGTAATTGTGGTTTATCTTGCCCAGTTTCT  488

seq1  ATAGAACATAGCTTCCACCTACGTTTAGAACTTTTGTTTGTTCTCTGAAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACATAGCTTCCACCTACGTTTAGAACTTTTGTTTGTTCTCTGAAC  538

seq1  TGTAGTATCTTTCTTTTAAAAAGACAGTTTAAAATATGTCAGGCATATGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATCTTTCTTTTAAAAAGACAGTTTAAAATATGTCAGGCATATGT  588

seq1  TTTTCTCTTTCCTTATCTATCCTACCTTTGTCATTCCCTCCTGTCTCTGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTTCCTTATCTATCCTACCTTTGTCATTCCCTCCTGTCTCTGT  638

seq1  CTCTATGTCTCTTTCTCTCATGTACCTATGTTTGTACATGAAGATGTGAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTCTCTTTCTCTCATGTACCTATGTTTGTACATGAAGATGTGAA  688

seq1  TGCCTACAGAGGAAAAGAGAGTTATATCTCCCAGAGCTCAAGTGTTCAGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAGAGGAAAAGAGAGTTATATCTCCCAGAGCTCAAGTGTTCAGT  738

seq1  AGCAGAAACTGAACACTCATGTCAGTCCAGACTCTAGGGACATTGGTTCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAACTGAACACTCATGTCAGTCCAGACTCTAGGGACATTGGTTCA  788

seq1  TTACTGGCAGTGAGTAACAGCAGAGGCTCATAATCATTCTTACCTTTGTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGCAGTGAGTAACAGCAGAGGCTCATAATCATTCTTACCTTTGTG  838

seq1  TGAAAGCAAATGTTCTGCAGAGATGCAGTCTGATTCCTTTTCTAAATGAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCAAATGTTCTGCAGAGATGCAGTCTGATTCCTTTTCTAAATGAT  888

seq1  GATGCACATATTTTATCTTCGCACAGCTCATGTTAGCAGGCTTTGAAACT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACATATTTTATCTTCGCACAGCTCATGTTAGCAGGCTTTGAAACT  938

seq1  TTGACTCTATTCAATTCTGCCTGGTCAGAGTGAGAATTCTCTTTTCTAAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCTATTCAATTCTGCCTGGTCAGAGTGAGAATTCTCTTTTCTAAG  988

seq1  GAAAATAATAGCATTCCAGGAAATGTATGATGGAAAAGTAGGGCATACGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATAGCATTCCAGGAAATGTATGATGGAAAAGTAGGGCATACGC  1038

seq1  TAATCACACTAGAACCCGGGGGAGCCCAAGTATTCCTCCTGGATAAGTCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACACTAGAACCCGGGGGAGCCCAAGTATTCCTCCTGGATAAGTCC  1088

seq1  AGAATAATGCTTACCTAGCCTTTCTGGCTAGAAAGCAATGCCAAAGCCAA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATGCTTACCTAGCCTTTCTGGCTAGAAAGCAATGCCAAAGCCAA  1138

seq1  AGAGCTTACTTGATCATCCGGTCTGTGGAGAGACGTGGTGAATTC  1187
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTACTTGATCATCCGGTCTGTGGAGAGACGTGGTGAATTC  1183

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information