MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-172K10
Chromosome	1 (Build37)
Map Location	83,783,734 - 83,833,498
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Hrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524, EG665236, LOC665246, Slc19a3, LOC665196, LOC621495, A030005K14Rik, 5530401N06Rik, EG665272, Ccl20, LOC100039575, 4930563E19Rik, EG621614, 4930544G21Rik, EG622958
Downstream gene	5033414K04Rik, LOC100039638, Dner, Trip12
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15463 MGI:1333754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A030005L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77922 MGI:1925172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	A030014E15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77917 MGI:1925167
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	EG621362 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621362 MGI:3644079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	A030003K21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77913 MGI:1925163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC665225 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC100039524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG665236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665236 MGI:3644885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC665246 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins pseudo : _no_value

name	Slc19a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80721 MGI:1931307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC621495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	A030005K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77921 MGI:1925171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins

name	5530401N06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71386 MGI:1918636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins

name	EG665272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665272 MGI:3644304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ccl20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20297 MGI:1329031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039575 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039575
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	4930563E19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71227 MGI:1923089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621614 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621614 MGI:3643858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	4930544G21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77629 MGI:1924879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622958 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622958 MGI:3647016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 5 Proteins

name	5033414K04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98496 MGI:2138391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039638 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039638
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Dner (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227325 MGI:2152889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trip12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14897 MGI:1309481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387721 GeneID:15463 MGI:1333754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HIV-1 Rev binding protein transcript_id : NM_010472.2

name	A030005L19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363731 GeneID:77922 MGI:1925172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA A030005L19 gene transcript_id : XM_896385.2

name	A030014E15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363732 GeneID:77917 MGI:1925167
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA A030014E15 gene transcript_id : XM_896395.2

name	EG621362 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363733 GeneID:621362 MGI:3644079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG621362 transcript_id : XM_896406.2

name	A030003K21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363735 GeneID:77913 MGI:1925163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : RIKEN cDNA A030003K21 gene transcript_id : XM_896429.2

name	LOC665225 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94363737 GeneID:665225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to keratin associated protein 5-2 transcript_id : XM_975463.1

name	LOC100039524 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234130 GeneID:100039524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to keratin associated protein 5-2 transcript_id : XM_001473054.1

name	EG665236 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234132 GeneID:665236 MGI:3644885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG665236 transcript_id : XM_975542.2

name	Slc19a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385307 GeneID:80721 MGI:1931307
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 19 (sodium/hydrogen exchanger), member 3 transcript_id : NM_030556.1

name	LOC621495 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94363742 GeneID:621495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : similar to keratin associated protein 5-2 transcript_id : XM_896478.2

name	5530401N06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363745 GeneID:71386 MGI:1918636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins product : RIKEN cDNA 5530401N06 gene transcript_id : XM_896507.2

name	Ccl20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394247 GeneID:20297 MGI:1329031
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 20 transcript_id : NM_016960.1

name	4930563E19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374152 GeneID:71227 MGI:1923089
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930563E19 gene transcript_id : NM_027725.2

name	4930544G21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66773172 GeneID:77629 MGI:1924879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930544G21 gene transcript_id : NM_172430.2

name	EG622958 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363739 GeneID:622958 MGI:3647016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 5 Proteins product : predicted gene, EG622958 transcript_id : XM_891787.2

name	5033414K04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51556212 GeneID:98496 MGI:2138391
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5033414K04 gene transcript_id : NM_001003948.1

name	Dner (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23097345 GeneID:227325 MGI:2152889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : delta/notch-like EGF-related receptor transcript_id : NM_152915.1

name	Trip12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91932790 GeneID:14897 MGI:1309481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor interactor 12 transcript_id : NM_133975.4

name	Hrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563260 CCDS:CCDS15100.1 GeneID:15463 MGI:1333754
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001675 - acrosome formation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : HIV-1 Rev binding protein protein_id : NP_034602.1

name	A030005L19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880741 GeneID:77922 MGI:1925172
definition	codon_start : 1 product : hypothetical protein LOC77922 protein_id : XP_901478.1

name	A030014E15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880743 GeneID:77917 MGI:1925167
definition	codon_start : 1 product : hypothetical protein LOC77917 protein_id : XP_901488.1

name	EG621362 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363734 GeneID:621362 MGI:3644079
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901499.2

name	A030003K21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363736 GeneID:77913 MGI:1925163
definition	codon_start : 1 product : hypothetical protein LOC77913 protein_id : XP_901522.2

name	LOC665225 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94363738 GeneID:665225
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980557.1

name	LOC100039524 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234131 GeneID:100039524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473104.1

name	EG665236 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234133 GeneID:665236 MGI:3644885
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980636.2

name	Slc19a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385308 CCDS:CCDS15101.1 GeneID:80721 MGI:1931307
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005542 - folic acid binding [Evidence IEA]; GO:0008517 - folic acid transporter activity [Evidence ISS]; GO:0008518 - reduced folate carrier activity [Evidence IEA]; GO:0015234 - thiamin transporter activity [Evidence ISS] GO_process : GO:0015884 - folic acid transport [Evidence ISS]; GO:0015888 - thiamin transport [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 19 (sodium/hydrogen exchanger), member 3 protein_id : NP_085033.1

name	LOC621495 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82880756 GeneID:621495
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901571.1

name	5530401N06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880761 GeneID:71386 MGI:1918636
definition	codon_start : 1 product : hypothetical protein LOC71386 protein_id : XP_901600.1

name	Ccl20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394248 GeneID:20297 MGI:1329031
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine subfamily A20 product : chemokine (C-C motif) ligand 20 protein_id : NP_058656.1

name	4930563E19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313046 CCDS:CCDS15103.1 GeneID:71227 MGI:1923089
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC71227 protein_id : NP_082001.1

name	4930544G21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66773173 GeneID:77629 MGI:1924879
definition	codon_start : 1 exception : mismatches in translation product : sphingosine kinase type 1-interacting protein protein_id : NP_766018.2

name	EG622958 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880791 GeneID:622958 MGI:3647016
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896880.1

name	5033414K04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51556213 CCDS:CCDS15104.1 GeneID:98496 MGI:2138391
definition	codon_start : 1 product : hypothetical protein LOC98496 protein_id : NP_001003948.1

name	Dner (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23097346 CCDS:CCDS15105.1 GeneID:227325 MGI:2152889
definition	GO_component : GO:0043025 - cell soma [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005112 - Notch binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0010001 - glial cell differentiation [Evidence IDA] [Evidence IMP]; GO:0007220 - Notch receptor processing [Evidence IDA]; GO:0048741 - skeletal muscle fiber development [Evidence IDA] codon_start : 1 note : transmembrane protein Bet product : delta/notch-like EGF-related receptor protein_id : NP_690879.1

name	Trip12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91932791 GeneID:14897 MGI:1309481
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : thyroid receptor interactor TRIP12; gene trap locus 6 product : thyroid hormone receptor interactor 12 protein_id : NP_598736.4

name	LOC665196 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665196
definition	number : 1 pseudo : _no_value

name	EG665272 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665272
definition	number : 1 pseudo : _no_value

name	LOC100039575 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039575
definition	number : 1 pseudo : _no_value

name	LOC100039575 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039575
definition	number : 2 pseudo : _no_value

name	EG621614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621614
definition	number : 1 pseudo : _no_value

name	LOC100039638 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039638
definition	number : 2 pseudo : _no_value

name	LOC100039638 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039638
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:162186
definition	standard_name : RH125364

name	(CDS detail)
type	STS
link
xref	UniSTS:167279
definition	standard_name : AU022786

name	(CDS detail)
type	STS
link
xref	UniSTS:266403
definition	standard_name : HRB

name	(CDS detail)
type	STS
link
xref	UniSTS:178423
definition	standard_name : C85612

name	(CDS detail)
type	STS
link
xref	UniSTS:158819
definition	standard_name : AU045498

name	(CDS detail)
type	STS
link
xref	UniSTS:128937
definition	standard_name : D1Mit8

name	(CDS detail)
type	STS
link
xref	UniSTS:224154
definition	standard_name : Slc19a3

name	(CDS detail)
type	STS
link
xref	UniSTS:178424
definition	standard_name : AI788884

name	(CDS detail)
type	STS
link
xref	UniSTS:185444
definition	standard_name : AW124805

name	(CDS detail)
type	STS
link
xref	UniSTS:158757
definition	standard_name : Scya20

name	(CDS detail)
type	STS
link
xref	UniSTS:178425
definition	standard_name : AB015136

name	(CDS detail)
type	STS
link
xref	UniSTS:165084
definition	standard_name : AI852220

name	(CDS detail)
type	STS
link
xref	UniSTS:234165
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128745
definition	standard_name : D1Mit384

name	(CDS detail)
type	STS
link
xref	UniSTS:128600
definition	standard_name : D1Mit255

name	(CDS detail)
type	STS
link
xref	UniSTS:162285
definition	standard_name : RH125466

name	(CDS detail)
type	STS
link
xref	UniSTS:124107
definition	standard_name : 34.MMHAP70FLD4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:209794
definition	standard_name : RH127183

name	(CDS detail)
type	STS
link
xref	UniSTS:128806
definition	standard_name : D1Mit438

name	(CDS detail)
type	STS
link
xref	UniSTS:125604
definition	standard_name : Results_ER_9_5_95_27.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:212197
definition	standard_name : RH128889

name	(CDS detail)
type	STS
link
xref	UniSTS:463331
definition	standard_name : TRIP12_3930

name	(CDS detail)
type	STS
link
xref	UniSTS:162649
definition	standard_name : RH125936

name	(CDS detail)
type	STS
link
xref	UniSTS:225226
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:163187
definition	standard_name : RH126479

name	(CDS detail)
type	STS
link
xref	UniSTS:210268
definition	standard_name : RH136275

name	LOC665246 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234135 GeneID:665246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins product : similar to potassium channel tetramerisation domain containing 3 pseudo : _no_value transcript_id : XR_031030.1

name	A030005K14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94363744 GeneID:77921 MGI:1925171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins product : RIKEN cDNA A030005K14 gene transcript_id : XR_002331.1

clone name	MSMg01-394E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-187B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-333H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-407E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277P11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-047J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-367K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-270P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197J18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-172K10.b	B6Ng01-172K10.g
ACC	GA001211	GA001212
length	1,196	1,129
definition	B6Ng01-172K10.b	B6Ng01-172K10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(83,783,734 - 83,784,941)	(83,832,378 - 83,833,498)
sequence	gaattctctaacaggagagaaaacaaacacaaccaaggcccctagaccac gccagtagagagaatatcaaagcccaaatccagacctaattattacaaga gtagatgttttaaaggcttccaataaaagggtacacttagtagtcctctt cttggaaatgtaaaactgaacttccagagaagtgatgcgattccaaagca ggatctctgatactagcacgtggccctcctcagcttacatgaagacttgg tgaaaatgacaccaacatagaacagtatgtgacaatctacttccagtttt tcatctgcacccccttctcactcttctagagatcagatatgaaatccagg gcttcataaatgccagataaatgctgtaccattgggctattcctctagca ctagcaacagttcttgaaactattgaaggcccttaactgctactcattgt aaagtatagcaagtacttctcatcgcttgacaaaggacctctttctcatt agggtcaggacatctgtgtcttgtttttcctttgcttgcttacactggtg atgtttatgacattactgggtagttcttggtttcttttgctggacaagtt ccaatgcagaggatgactaagggtagctgtttattggaagcctttacagg atctaacctggtaataaattggtctctgtgtccctttcattttcttcaca taaaatagaaatggaaagcaaaaggcaaaggagatttgggtcctagtaag taggtgcccattccatccctcaagccagaaaagttgtactgttgacaaac tcatactcatgccctggcctgccagcctggctttgaaatcaggagcttca caagcatgggttaagattatctcctgctttttcgaaacttctagaagccc tcatctttcttctttctataatctgaaataaatttatagttctttaaaaa acagatatttcctttttgagagttttagggcataattaaaaatagcacat tgaatgctacctgtaatcttaaggatacatgcagagtttactaaattctc atggctatgtgtgctgaagacagctgtcatacgctttactcagtagggca aactcttctttaaaatatatatcacagtgtatttcagacctttcagatta ggtcctctatctagatccaccgaatgcctatgctgggtagtggtga	gaattcaaaatgaaataaggacttatttaactcaaggcctgaaacaccaa acacctaaaagagccttctgatgagatgtaaggttttccgttgtcttgtt gtaacagagagaatgaaaacttcagaattaaaacgagagactctgctcca aagggagtgacgttgcaagaggatcagaaatcaccaaggaggtgaggaga ccactaaaaactgcagagaagctcagaggccaggcagcacaaaggcgcag gcagtaacagctccaactgtggcatcctgggagggggaagaggcatggaa acacagaagtggctttgaatactaagactacttcctctttatcctttcca tactgatagaaacagaatatacagaatatacagaattagataatattagc ttttcagaattactcctatcccgtgtctgcatccttggatgaatcattag tatttgtaaagtctttaaatggatgatcttactcttttttgacctttcca aacatgatcacctcatgtgataggcaccatacctgagacattttggtatc atatctaggaaggttatcagtaatccagagatagtcaatgtctattgcgc ttgggacgcttcacacagcaactgaaccatccaccgtggtggatgccatg gtgggaggccacggcatctctgaggctccccggaaaagtgtatatttggt tttcccaccaggtgctttcctcctctttcctgctcatgtggtatattaac aacaatcctaccagcatctccatggaaacaggcacagatgttctgaaata cacctacggaaaaaaatccctaccaatgagcagccctgttatttaattaa ttccaatatttttctatcagctctttccctttgaagttgcagattgcttt tcaattgagagtcaattttcttcccagtaacagataccaatggtttcctt ttgttctcattgtctcaggattcagaaaataagaattcccaggacctgtg tgctaaatagttcattcttgtattcgcaatttgctgacttttgtcctccc agaaaaagtcacctctagggttatatggatgaatattgctgctttgtcat agcctgaatgagccatgtgtgcattctgc
quality values	Open. Hide. 58 36 29 22 58 38 36 44 58 52 62 31 22 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 47 62 62 62 62 59 47 59 45 49 59 59 49 54 62 62 62 54 62 59 49 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 52 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 45 41 58 58 58 54 52 54 58 54 58 58 54 45 38 58 58 58 58 51 50 58 41 58 58 40 58 45 41 51 49 51 41 58 54 50 58 51 58 58 58 50 58 47 49 45 58 58 41 58 47 42 38 41 48 50 58 50 49 50 58 58 51 46 53 51 48 49 49 58 58 58 58 40 49 51 46 58 58 48 49 58 58 51 52 58 50 58 54 58 54 58 52 52 58 49 54 58 54 52 41 43 58 58 50 52 52 54 53 42 52 39 58 50 58 58 43 50 53 39 58 58 41 39 58 58 58 49 49 50 40 35 38 51 50 37 54 32 51 54 49 39 54 53 34 37 32 54 53 54 54 54 32 49 39 31 42 37 40 39 33 34 42 52 32 50 45 51 26 25 44 30 45 52 37 35 28 42 32 51 44 38 52 32 34 40 42 47 37 31 54 54 54 54 28 29 51 45 31 32 40 37 54 29 52 40 40 31 35 52 45 32 53 40 31 30 32 42 41 40 30 40 53 32 40 32 27 33 20 24 46 28 32 27 31 39 32 28 47 29 46 42 36 42 51 42 31 45 51 29 31 35 33 20 46 42 21 31 33 45 34 23 31 31 33 30 30 31 31 45 51 42 31 31 29 32 30 29 19 42 34 33 33 36 27 28 32 43 29 42 48 47 47 34 30 7 32 46 27 27 27 31 33 31 30 18 31 33 23 32 41 28 30 32 30 31 21 31 47 27 29 31 6 10 23 48 34 29 20 25 25 32 14 22 32 31 30 31 46 24 27 39 46 29 13 46 27 21 26 32 37 20 31 32 33 48 31 27 48 48 44 44 22 20 20 24 42 21 20 26 48 38 20 22 29 48 48 44 29 21 31 20 37 21 27 48 48 32 30 25 44 29 12 16 18 9 30 15 21 20 48 48 48 15 7 31 6 19 13 11 9 33 22 14 11 26 28 34 32 32 20 21 18 22 32 24 25 23 10 15 9 22 11 11 32 18 22 8 4 8 14 28 25 26 6 4 3 4 19 30 16 8 3 3 3 26 15 17 10 24 24 21 20 17 19 21 10 28 20 24 10 5 16 15 23 26 27 13 18 10 11 15 7 8 19 19 11 25 5 18 10 11 8 24 10 20 10 38 15 13 19 10 24 20 10 12 21 22 30 9 3 2 18 17 12 6 7 9 12 12 7 22 17 24 17 14 4 7 4 5 17 3 3 4 18 7 8 10 20 9 17 5 12 10 9 13 3 4 7 25 9 5 15 28 9 13 22 10 10 6 9 6 5 6 4 8 4 5 5 7 9 15 15 7 6 5 15 5 5 13 5 4 2 1 5 3 1 5 5 4 6 5 8 6 7 5 9 6 5 1 3 3 6 22 8 8 6 9	Open. Hide. 46 38 47 47 62 42 31 56 56 62 49 62 62 56 56 56 38 24 41 49 28 43 56 62 62 62 62 59 62 62 62 62 59 59 62 49 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 49 54 59 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 54 62 56 62 62 62 62 62 62 62 62 62 54 42 47 52 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 43 62 52 58 58 58 58 58 54 58 58 58 42 39 42 58 38 42 54 41 58 58 53 41 58 54 58 41 58 54 58 52 54 58 41 26 42 58 47 54 58 58 54 41 54 54 58 58 52 46 52 52 54 52 43 58 58 46 54 58 58 58 52 58 58 52 58 54 54 50 43 52 54 39 58 52 25 54 58 54 39 58 50 37 42 50 58 58 48 58 58 58 58 49 42 14 47 34 40 40 54 50 50 58 53 53 52 51 41 36 14 45 35 53 46 50 40 38 42 48 52 53 58 51 37 31 39 39 37 52 43 42 58 41 46 38 36 50 50 22 39 50 43 31 42 40 29 21 49 46 58 40 58 58 50 51 53 42 46 49 49 39 27 27 29 21 38 16 54 28 32 35 32 31 46 27 58 58 18 51 37 29 39 16 22 49 46 16 50 58 30 35 50 24 24 49 32 34 32 32 42 49 37 42 43 41 15 34 27 42 42 15 50 54 46 49 31 52 54 23 38 45 42 35 39 32 53 32 33 37 33 31 42 44 32 37 27 41 31 35 26 25 26 37 14 52 46 52 47 41 41 40 32 33 24 18 32 19 18 25 20 15 7 9 26 27 29 32 32 27 19 40 6 20 51 32 25 29 15 51 33 27 31 36 32 37 23 25 33 22 31 31 33 31 31 38 46 46 46 7 17 31 31 31 29 25 31 43 33 16 29 51 32 33 51 26 35 51 31 32 43 31 21 27 29 28 31 22 22 35 20 34 31 17 33 41 40 30 22 12 6 7 11 28 31 21 21 8 13 22 22 42 7 46 42 9 7 10 9 11 36 29 13 15 31 33 21 15 8 17 37 27 22 20 31 19 32 16 31 39 9 39 26 9 35 17 41 46 10 16 7 8 8 8 11 9 14 16 35 15 31 16 23 42 13 10 31 33 8 14 12 6 8 41 44 32 21 11 14 7 13 22 11 38 25 38 24 16 10 11 35 10 10 13 14 13 37 22 31 27 25 27 37 11 31 19 9 25 18 32 32 11 7 6 6 5 7 14 31 9 10 10 10 5 5 10 33 39 17 12 10 29 31 16 14 20 43 43 23 19 12 13 6 11 24 38 28 20 19 23 34 34 28 11 14 5 4 4 5 26 6 6 6 4 3 5 3 5 12 16 5 4 5 19 23 18 7 27 10 8 8 15 26 7 6 4 5 15 11 13 22 18 3 3 3 6 4 8 11 11 5 4 7 10 9 11 8 23 8 25 14 12 4 4 3 1 4 11 7 8 22 22 7 10 15 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_83783734_83784941
seq2: B6Ng01-172K10.b_29_1224

seq1  GAATTCTCTAACAGGAGAGAAAACAAACACAACCAAGGCCCCTAGACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACAGGAGAGAAAACAAACACAACCAAGGCCCCTAGACCAC  50

seq1  GCCAGTAGAGAGAATATCAAAGCCCAAATCCAGACCTAATTATTACAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTAGAGAGAATATCAAAGCCCAAATCCAGACCTAATTATTACAAGA  100

seq1  GTAGATGTTTTAAAGGCTTCCAATAAAAGGGTACACTTAGTAGTCCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGTTTTAAAGGCTTCCAATAAAAGGGTACACTTAGTAGTCCTCTT  150

seq1  CTTGGAAATGTAAAACTGAACTTCCAGAGAAGTGATGCGATTCCAAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAATGTAAAACTGAACTTCCAGAGAAGTGATGCGATTCCAAAGCA  200

seq1  GGATCTCTGATACTAGCACGTGGCCCTCCTCAGCTTACATGAAGACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTGATACTAGCACGTGGCCCTCCTCAGCTTACATGAAGACTTGG  250

seq1  TGAAAATGACACCAACATAGAACAGTATGTGACAATCTACTTCCAGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGACACCAACATAGAACAGTATGTGACAATCTACTTCCAGTTTT  300

seq1  TCATCTGCACCCCCTTCTCACTCTTCTAGAGATCAGATATGAAATCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGCACCCCCTTCTCACTCTTCTAGAGATCAGATATGAAATCCAGG  350

seq1  GCTTCATAAATGCCAGATAAATGCTGTACCATTGGGCTATTCCTCTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATAAATGCCAGATAAATGCTGTACCATTGGGCTATTCCTCTAGCA  400

seq1  CTAGCAACAGTTCTTGAAACTATTGAAGGCCCTTAACTGCTACTCATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAACAGTTCTTGAAACTATTGAAGGCCCTTAACTGCTACTCATTGT  450

seq1  AAAGTATAGCAAGTACTTCTCATCGCTTGACAAAGGACCTCTTTCTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATAGCAAGTACTTCTCATCGCTTGACAAAGGACCTCTTTCTCATT  500

seq1  AGGGTCAGGACATCTGTGTCTTGTTTTTCCTTTGCTTGCTTACACTGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAGGACATCTGTGTCTTGTTTTTCCTTTGCTTGCTTACACTGGTG  550

seq1  ATGTTTATGACATTACTGGGTAGTTCTTGGTTTCTTTTGCTGGACAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATGACATTACTGGGTAGTTCTTGGTTTCTTTTGCTGGACAAGTT  600

seq1  CCAATGCAGAGGATGACTAAGGGTAGCTGTTTATTGGAAGCCTTTACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCAGAGGATGACTAAGGGTAGCTGTTTATTGGAAGCCTTTACAGG  650

seq1  ATCTAACCTGGTAATAAATTGGTCTCTGTGTCCCTTTCATTTTCTTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACCTGGTAATAAATTGGTCTCTGTGTCCCTTTCATTTTCTTCACA  700

seq1  TAAAATAGAAATGGAAAGCAAAAGGCAAAGGAGATTTGGGTCCTAGTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGAAATGGAAAGCAAAAGGCAAAGGAGATTTGGGTCCTAGTAAG  750

seq1  TAGGTGCCCATTCCATCCCTCAAGCCAGAAAAGTTGTACTGTTGACAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCCCATTCCATCCCTCAAGCCAGAAAAGTTGTACTGTTGACAAAC  800

seq1  TCATACTCATGCCCTGGCCTGCCAGCCTGGCTTTGAAATCAGGAGCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTCATGCCCTGGCCTGCCAGCCTGGCTTTGAAATCAGGAGCTTCA  850

seq1  CAAGCATGGGTTAAGATTATCTCCTGCTTTTTCGAAACTTCTAGAAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATGGGTTAAGATTATCTCCTGCTTTTTCGAAACTTCTAGAAGCCC  900

seq1  TCATCTTTCTTCTTTCTATAATCTGAAATAAAATTTATAGTTCTTTAAAA  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCATCTTTCTTCTTTCTATAATCTGAAAT-AAATTTATAGTTCTTTAAAA  949

seq1  AACAGATATTTCCTTTTTGAGAGTTTTAGGGCATAATTAAAATAAGCACA  1000
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  AACAGATATTTCCTTTTTGAGAGTTTTAGGGCATAATTAAAAATAGCACA  999

seq1  TTGAATGCTACCTGTAATCTT-AGGATACATGCAGAGTTTACCTTAAATT  1049
      ||||||||||||||||||||| ||||||||||||||||||||  ||||||
seq2  TTGAATGCTACCTGTAATCTTAAGGATACATGCAGAGTTTAC--TAAATT  1047

seq1  CTCATGGCTATGTGTGCTGAAGACAGCTGGTCCATACGCTTTACTCAGTA  1099
      |||||||||||||||||||||||||||||   ||||||||||||||||||
seq2  CTCATGGCTATGTGTGCTGAAGACAGCTG--TCATACGCTTTACTCAGTA  1095

seq1  GGGGCCAAACTCTTCTTTAAAAATATAATTAATCACAGTGTATTTCCAGA  1149
      |||  ||||||||||||| ||||||||    |||||||||||||| ||||
seq2  GGG--CAAACTCTTCTTT-AAAATATA---TATCACAGTGTATTT-CAGA  1138

seq1  -CTTTCAAGATAGTGTCTCTATCTAGATCACTCAAAAAATG-CTATGCTG  1197
       ||||||   |||   |||||||||||||   ||   |||| ||||||||
seq2  CCTTTCAGATTAGGTCCTCTATCTAGATC---CACCGAATGCCTATGCTG  1185

seq1  GGGAATGGTGA  1208
      || | ||||||
seq2  GGTAGTGGTGA  1196

seq1: chr1_83832378_83833498
seq2: B6Ng01-172K10.g_67_1195 (reverse)

seq1  GCAGAAATGCACACATTGGCTCATCCAGGCTATGACAAAAGCAGACAATA  50
      |||| |||||||||| |||||||| ||||||||||| ||||||| |||||
seq2  GCAG-AATGCACACA-TGGCTCATTCAGGCTATGAC-AAAGCAG-CAATA  46

seq1  -TCATCCATATAACACTAG-GGTGACCTTTTCTGGGAGGACAAAAGTCAG  98
       ||||||||||||| |||| |||||| |||||||||||||||||||||||
seq2  TTCATCCATATAACCCTAGAGGTGACTTTTTCTGGGAGGACAAAAGTCAG  96

seq1  CAAATGGCGATTACA--GATGAACTA-TTAGCACACAG--TCTGGGAA-T  142
      ||||| |||| ||||   |||||||| |||||||||||   ||||||| |
seq2  CAAATTGCGAATACAAGAATGAACTATTTAGCACACAGGTCCTGGGAATT  146

seq1  CTTA-TTTCTGAATCTTGAGACAATGAGA--CAAAGGAAACCATTGGTAT  189
      |||| |||||||||| |||||||||||||   ||||||||||||||||||
seq2  CTTATTTTCTGAATCCTGAGACAATGAGAACAAAAGGAAACCATTGGTAT  196

seq1  CTGTTACTGGGAAG-AAATTGACTCTCAAATTGAAAAGCAATCTGCAACT  238
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  CTGTTACTGGGAAGAAAATTGACTCTC-AATTGAAAAGCAATCTGCAACT  245

seq1  TCAAAGGGAAAGAGCTGATAGAAAAATATTGGAATTAATTAAATAACAGG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGAAAGAGCTGATAGAAAAATATTGGAATTAATTAAATAACAGG  295

seq1  GCTGCTCATTGGTAGGGATTTTTTTCCGTAGGTGTATTTCAGAACATCTG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCATTGGTAGGGATTTTTTTCCGTAGGTGTATTTCAGAACATCTG  345

seq1  TGCCTGTTTCCATGGAGATGCTGGTAGGATTGTTGTTAATATACCACATG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTTCCATGGAGATGCTGGTAGGATTGTTGTTAATATACCACATG  395

seq1  AGCAGGAAAGAGGAGGAAAGCACCTGGTGGG-AAACCAAATATACACTTT  437
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCAGGAAAGAGGAGGAAAGCACCTGGTGGGAAAACCAAATATACACTTT  445

seq1  TCCGGGGAGCCTCAGAGATGCCGTGGCCTCCCACCATGGCATCCACCACG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGGAGCCTCAGAGATGCCGTGGCCTCCCACCATGGCATCCACCACG  495

seq1  GTGGATGGTTCAGTTGCTGTGTGAAGCGTCCCAAGCGCAATAGACATTGA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGTTCAGTTGCTGTGTGAAGCGTCCCAAGCGCAATAGACATTGA  545

seq1  CTATCTCTGGATTACTGATAACCTTCCTAGATATGATACCAAAATGTCTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTGGATTACTGATAACCTTCCTAGATATGATACCAAAATGTCTC  595

seq1  AGGTATGGTGCCTATCACATGAGGTGATCATGTTTGGAAAGGTCAAAAAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGTGCCTATCACATGAGGTGATCATGTTTGGAAAGGTCAAAAAA  645

seq1  GAGTAAGATCATCCATTTAAAGACTTTACAAATACTAATGATTCATCCAA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGATCATCCATTTAAAGACTTTACAAATACTAATGATTCATCCAA  695

seq1  GGATGCAGACACGGGATAGGAGTAATTCTGAAAAGCTAATATTATCTAAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAGACACGGGATAGGAGTAATTCTGAAAAGCTAATATTATCTAAT  745

seq1  TCTGTATATTCTGTATATTCTGTTTCTATCAGTATGGAAAGGATAAAGAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATTCTGTATATTCTGTTTCTATCAGTATGGAAAGGATAAAGAG  795

seq1  GAAGTAGTCTTAGTATTCAAAGCCACTTCTGTGTTTCCATGCCTCTTCCC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGTCTTAGTATTCAAAGCCACTTCTGTGTTTCCATGCCTCTTCCC  845

seq1  CCTCCCAGGATGCCACAGTTGGAGCTGTTACTGCCTGCGCCTTTGTGCTG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGGATGCCACAGTTGGAGCTGTTACTGCCTGCGCCTTTGTGCTG  895

seq1  CCTGGCCTCTGAGCTTCTCTGCAGTTTTTAGTGGTCTCCTCACCTCCTTG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCTCTGAGCTTCTCTGCAGTTTTTAGTGGTCTCCTCACCTCCTTG  945

seq1  GTGATTTCTGATCCTCTTGCAACGTCACTCCCTTTGGAGCAGAGTCTCTC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCTGATCCTCTTGCAACGTCACTCCCTTTGGAGCAGAGTCTCTC  995

seq1  GTTTTAATTCTGAAGTTTTCATTCTCTCTGTTACAACAAGACAACGGAAA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATTCTGAAGTTTTCATTCTCTCTGTTACAACAAGACAACGGAAA  1045

seq1  ACCTTACATCTCATCAGAAGGCTCTTTTAGGTGTTTGGTGTTTCAGGCCT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACATCTCATCAGAAGGCTCTTTTAGGTGTTTGGTGTTTCAGGCCT  1095

seq1  TGAGTTAAATAAGTCCTTATTTCATTTTGAATTC  1121
      ||||||||||||||||||||||||||||||||||
seq2  TGAGTTAAATAAGTCCTTATTTCATTTTGAATTC  1129

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information