BAC Information

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BAC

Clone NameB6Ng01-174N19
Chromosome1 (Build37)
Map Location 33,295,077 - 33,295,980
singlet/doubletsinglet
Overlap geneLOC100040828
Upstream geneKhdrbs2, EG408191, EG633498, LOC213711
Downstream geneEG666108, Prim2, 1700001G17Rik, Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik, Dst
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174N19.bB6Ng01-174N19.g
ACCGA002824GA002825
length920927
definitionB6Ng01-174N19.b B6Ng01-174N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacttaaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagtctgaagtgtggacactatgcccctccttagatttgggaa
caaaaacacccatggaaaggagttacagagacggagtttggagctgagat
gaaaggatggaccatgtagagactgccatagccagggatcccactcccat
aatcagcatccaacgctgacaccattgcatacactagcaagatttttttt
tttttttttttgaaaggaacgccaaagctgctgtcctcttgtgagaacta
ttgccaggggcccagcaaat
gaattcagctgatgcttacatttcctgtttgaatgagttcacatctcctc
tatttactaaagtacccaagaacaaataccgtttaatgtatgtatattat
ctctgtaccatgtgtgtatattaatgtattattctgtatatattttgctg
atttcactccaaacctttacagtgagaaaaccaatgcagttgatttcaag
agagccagcgatctgcagacacacacaatgtctccacacaggaacaagag
cagtaatttagtgaaaacaaaattctagcacttggcttctaataagcatc
ttgggaaaggtatccaggaggcataaacaagtgtaaagtggctggaactg
caaatatatttatgaaggctttcggtttcaaatctttttaagtatgtaag
tagtaggtacaaacacttggcaagtattgtgctaaaatattagtcagcat
tttataaaaccttcaatgttttattcattaatgttgcagtaacaatggct
gacaacatgttacaaataacaagcatgaattgcctcagacgagtcagtct
ctctcttttccttttaatgtaacaatataggtgcatttaacacacacgtg
caaacactctcacacatatacctacaccaaatatagtgcaaaggttaatc
cttagctacatagtaactttgaggctacccttgggctacacatgaccatg
tttaatttaatccaaaattccttcaagagcctttaacttcttaaagccat
tctgttaaattactctgttttaagtgtgacattcaaaaggaagtcaatgg
tcgtgttcttcctttgaatgataatccactttcattttactgagaacagt
tctccttggatgaaacctgggaactttgattttagttttgttcagctaga
cagctttgcccttgaaagaatcacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_33295077_33295980
seq2: B6Ng01-174N19.g_69_995 (reverse)

seq1  CAGGTGAT--CTTCAAGG--CAAGCTGTCTAGCTGAAC-AAACT-AAATC  44
      ||||||||   |||||||   ||||||||||||||||| ||||| |||||
seq2  CAGGTGATTCTTTCAAGGGCAAAGCTGTCTAGCTGAACAAAACTAAAATC  50

seq1  AAAGTTCC--AGATTCATC--AAGAGAACTGTTCTCAGT-AAATG-AAGT  88
      ||||||||   | ||||||  | |||||||||||||||| ||||| ||||
seq2  AAAGTTCCCAGGTTTCATCCAAGGAGAACTGTTCTCAGTAAAATGAAAGT  100

seq1  GGATTATCAT--CAAGGAAG-ACACGACCATTGACTTCCTTTTG-ATGTC  134
      ||||||||||   ||||||| ||||||||||||||||||||||| |||||
seq2  GGATTATCATTCAAAGGAAGAACACGACCATTGACTTCCTTTTGAATGTC  150

seq1  ACACTTAAAACAGAGTAATTTAACAGAATGGC-TTAAGAAGTT-AAGGCT  182
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  ACACTTAAAACAGAGTAATTTAACAGAATGGCTTTAAGAAGTTAAAGGCT  200

seq1  CTTGAAGGAATTTTGGATT-AATTAAACATGGTCATGTGTAGCCCAA-GG  230
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  CTTGAAGGAATTTTGGATTAAATTAAACATGGTCATGTGTAGCCCAAGGG  250

seq1  TAGCCTCAAAGTTACTATGTAGCTAAGGA-TAACC-TTGCACTATATTTG  278
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  TAGCCTCAAAGTTACTATGTAGCTAAGGATTAACCTTTGCACTATATTTG  300

seq1  GTGTAGGTATATGTGTGAGAGTGTTTGCACGTGTGTGTTAAATGCACCTA  328
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGTATATGTGTGAGAGTGTTTGCACGTGTGTGTTAAATGCACCTA  350

seq1  TATTGTTACATTAAAAGG-AAAGAGAGAGACTGACTCGTCTGAGGCAATT  377
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATTGTTACATTAAAAGGAAAAGAGAGAGACTGACTCGTCTGAGGCAATT  400

seq1  CATGCTTGTTATTTGTAACATGTTGTCAGCCATTGTTACTGCAACATTAA  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTGTTATTTGTAACATGTTGTCAGCCATTGTTACTGCAACATTAA  450

seq1  TGAATAAAACATTGAAGGTTTTATAAAATGCTGACTAATATTTTAGCACA  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAACATTGAAGGTTTTATAAAATGCTGACTAATATTTTAGCACA  500

seq1  ATACTTGCCAAGTGTTTGTACCTACTACTTACATACTTAAAAAGATTTGA  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGCCAAGTGTTTGTACCTACTACTTACATACTTAAAAAGATTTGA  550

seq1  AACCGAAAGCCTTCATAAATATATTTGCAGTTCCAGCCACTTTACACTTG  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAAAGCCTTCATAAATATATTTGCAGTTCCAGCCACTTTACACTTG  600

seq1  TTTATGCCTCCTGGATACCTTTCCCAAGATGCTTATTAGAAGCCAAGTGC  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCCTCCTGGATACCTTTCCCAAGATGCTTATTAGAAGCCAAGTGC  650

seq1  TAGAATTTTGTTTTCACTAAATTACTGCTCTTGTTCCTGTGTGGAGACAT  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTTGTTTTCACTAAATTACTGCTCTTGTTCCTGTGTGGAGACAT  700

seq1  TGTGTGTGTCTGCAGATCGCTGGCTCTCTTGAAATCAACTGCATTGGTTT  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTCTGCAGATCGCTGGCTCTCTTGAAATCAACTGCATTGGTTT  750

seq1  TCTCACTGTAAAGGTTTGGAGTGAAATCAGCAAAATATATACAGAATAAT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGTAAAGGTTTGGAGTGAAATCAGCAAAATATATACAGAATAAT  800

seq1  ACATTAATATACACACATGGTACAGAGATAATATACATACATTAAACGGT  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATATACACACATGGTACAGAGATAATATACATACATTAAACGGT  850

seq1  ATTTGCTCTTGGGTACTTTAGTAAATAGAGGAGATGTGAACTCATTCAAA  877
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCTTGGGTACTTTAGTAAATAGAGGAGATGTGAACTCATTCAAA  900

seq1  CAGGAAATGTAAGCATCAGCTGAATTC  904
      |||||||||||||||||||||||||||
seq2  CAGGAAATGTAAGCATCAGCTGAATTC  927