BAC Information

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BAC

Clone NameB6Ng01-175G08
Chromosome1 (Build37)
Map Location 165,130,077 - 165,131,267
singlet/doubletsinglet
Overlap genenone
Upstream geneDnm3, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc, Bat2d, Fmo4, Fmo1, Fmo2, Fmo6, Fmo3, 4921528O07Rik
Downstream genePrrx1, LOC100039597, Scyl1bp1, LOC665237, Gm207, LOC100039626, Kifap3, Scyl3, BC055324, 2810422O20Rik, Sele, Sell, Selp, F5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175G08.bB6Ng01-175G08.g
ACCGA003211GA003212
length1,1371,182
definitionB6Ng01-175G08.b B6Ng01-175G08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgctctgaactaaacccatcaaatcctgggatttttttggttgg
taaactattaatgactgtttctatttctttaggggatatgtgactgttta
gatcatttatctgaccctgatttaactttggtacctggtatctatctaga
aaattgtccattttatccagattttctggttttgctgagtataggctttt
gtagtaagatctgatgattttttggatttccttggtttctgcttttatgt
ctcccttttcacttctgattttgttagttagcacactatctctgtgccct
ctagttagtctggctaagggtttatctattttgttgattttctcaataac
cagatcctgatttggttgattctttgtataattctttttgtttccacttg
gttgatttcaaccctgtgtttgattatttcctgctgtatttttcttgggt
gaatttacttctctttgttctagagctttcaggtgtgctgtcaagctgct
agtgtatgctctatccagtttcattttggaggcactcatagctacaagtt
ttcttcttaggactgatttcattgtgtcccatatgttgtggcttcatttt
cattaaattctaaaaagtcttttctaaaatttatttcttttttgaccaag
ttatcattgagtagagtgttgttcagcttccatgtgtatacgggcttttg
attgtttatgttgttattgaagaccaaccttagcccggagtgatctgata
ggatgcataggattatttcaatcttcttggatctgttgaggcctgttttg
tgactgattatgtgttcagttttggataaggttccatgaggtgttgagaa
gaaggtatattcttttgttttaggataaaatgttctatagatatctgtta
aatccatttgtttcataacttctgttagtttcacagtgtctttgtttagt
ttctgtttccaggatatgtccattgatgaaaatggggtgttgaaggcttc
actattctctgtgtggtgcatgtgtgctttgagcttagtaaggtttcttt
tatgaatggtgggtgcccttgcattagagcatagatgttagaatagagag
agtcttctctggtagaaattttcctttggaatgagta
gaattcaatgccagtcatggcagtacatgcttctaaccctgtagctggga
tggaggaaataggcaggcgcttgaggcttgctagccagctagcctcaccc
acttgctaagctctactctactgaaggaccctgtctcacaaagcaaaaaa
ggtacatagagccgtagaggtgatacccgagggtgtcctctggccttcac
ttgcgcctgtgcacattgcaacattcacgtgcacgtgcacacatcattaa
aggaatctcaaaggcattatgaaaattgaaaagaatcatccagagtaaaa
cttttacacgctgtattattatactgtgatgttcttgaaaacagaactac
aaggatatcacattagtggtgaccagtgagggagtgagtggcacagggag
tatttgggaccatgggacaatcctatgtcctgatcaagacagtgttcaca
cagctctgtgtatgtactgattcacagaactgcgcacgaaaaagaccaat
tttaccgtgtgttaatgaagataaaccatggggtgggcaccctgttagag
acactgggtcacaaaaatacaaaccctatccttgcatcctattgtctcat
caccatccttttcaaaggcgagcctcatccccttctccctcctccacagc
ctctctgattgctctttgtttccctgaaaagcagtcatgattttattctc
ctacccaaggccttgcctaacaacccagcctcactctgccatgtctcgac
tcctataattcttcctatatccttcttggcacatatcctaacacttagat
tattcaaacaatttttcaggtgcatatattggtctgtcatgaccagaatg
tcttttcctccaaaagcatgcagatagagaacaaacccagactcgctgga
gccggtgtaatcaaaatgttatgtcgaaaaaagccaatcttatttctgtg
agtgtgagactttagagaggaagtcacaggatgaaccagcagtgcacatg
gaattcagagtctagggcacaaaacttcattagatatacttaaacatact
cacagcacacaatacatacagcacacacacggaggcccttgctctggctc
gactttatattattatacaaagccagttagcctatggatatccattgctt
ccattccatattataaatgctctcacaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_165130077_165131267
seq2: B6Ng01-175G08.g_62_1243 (reverse)

seq1  GTTTTTGT--GAGCATTTATAATATGAAATGAAAACCACTTTGATATTAC  48
      ||||||||  |||||||||||||||| |||| || | |  | |||||  |
seq2  GTTTTTGTGAGAGCATTTATAATATGGAATGGAAGCAA--TGGATAT--C  46

seq1  CATA-GCTAACT-GCTTTGTATAATAATTATAAGTCGAG-CAGAGCAAGG  95
      |||| ||||||| |||||||||||||||   |||||||| |||||||| |
seq2  CATAGGCTAACTGGCTTTGTATAATAATATAAAGTCGAGCCAGAGCAA-G  95

seq1  GGCTTCCGTGTGTGTGCTTGTATGTA-TGTGTGCCTGTGAGGTTATGTTT  144
      ||| ||||||||||||| |||||||| |||||| |||||||  |||||||
seq2  GGCCTCCGTGTGTGTGC-TGTATGTATTGTGTG-CTGTGAG--TATGTTT  141

seq1  AAGTATATTCCTTAATGAAGTTTTGTGCCCTTAGACTCTTGGAATTCCAT  194
      ||||||||    |||||||||||||||||| ||||||||  |||||||||
seq2  AAGTATAT---CTAATGAAGTTTTGTGCCC-TAGACTCT--GAATTCCAT  185

seq1  GTGCACTGCTGGTTCATCCTGTGACTTCCTCTCTAAAGTCTCACACTCAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTGCTGGTTCATCCTGTGACTTCCTCTCTAAAGTCTCACACTCAC  235

seq1  AGAAATAAGATTGGCTTTTTTCGACATAACATTTTGATTACACCGGCTCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAGATTGGCTTTTTTCGACATAACATTTTGATTACACCGGCTCC  285

seq1  AGCGAGTCTGGGTTTGTTCTCTATCTGCATGCTTTTGGAGGAAAAGACAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGTCTGGGTTTGTTCTCTATCTGCATGCTTTTGGAGGAAAAGACAT  335

seq1  TCTGGTCATGACAGACCAATATATGCACCTGAAAAATTGTTTGAATAATC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCATGACAGACCAATATATGCACCTGAAAAATTGTTTGAATAATC  385

seq1  TAAGTGTTAGGATATGTGCCAAGAAGGATATAGGAAGAATTATAGGAGTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTAGGATATGTGCCAAGAAGGATATAGGAAGAATTATAGGAGTC  435

seq1  GAGACATGGCAGAGTGAGGCTGGGTTGTTAGGCAAGGCCTTGGGTAGGAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATGGCAGAGTGAGGCTGGGTTGTTAGGCAAGGCCTTGGGTAGGAG  485

seq1  AATAAAATCATGACTGCTTTTCAGGGAAACAAAGAGCAATCAGAGAGGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCATGACTGCTTTTCAGGGAAACAAAGAGCAATCAGAGAGGCT  535

seq1  GTGGAGGAGGGAGAAGGGGATGAGGCTCGCCTTTGAAAAGGATGGTGATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGAGGGAGAAGGGGATGAGGCTCGCCTTTGAAAAGGATGGTGATG  585

seq1  AGACAATAGGATGCAAGGATAGGGTTTGTATTTTTGTGACCCAGTGTCTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATAGGATGCAAGGATAGGGTTTGTATTTTTGTGACCCAGTGTCTC  635

seq1  TAACAGGGTGCCCACCCCATGGTTTATCTTCATTAACACACGGTAAAATT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGGTGCCCACCCCATGGTTTATCTTCATTAACACACGGTAAAATT  685

seq1  GGTCTTTTTCGTGCGCAGTTCTGTGAATCAGTACATACACAGAGCTGTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTTCGTGCGCAGTTCTGTGAATCAGTACATACACAGAGCTGTGT  735

seq1  GAACACTGTCTTGATCAGGACATAGGATTGTCCCATGGTCCCAAATACTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGTCTTGATCAGGACATAGGATTGTCCCATGGTCCCAAATACTC  785

seq1  CCTGTGCCACTCACTCCCTCACTGGTCACCACTAATGTGATATCCTTGTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCACTCACTCCCTCACTGGTCACCACTAATGTGATATCCTTGTA  835

seq1  GTTCTGTTTTCAAGAACATCACAGTATAATAATACAGCGTGTAAAAGTTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTCAAGAACATCACAGTATAATAATACAGCGTGTAAAAGTTT  885

seq1  TACTCTGGATGATTCTTTTCAATTTTCATAATGCCTTTGAGATTCCTTTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGGATGATTCTTTTCAATTTTCATAATGCCTTTGAGATTCCTTTA  935

seq1  ATGATGTGTGCACGTGCACGTGAATGTTGCAATGTGCACAGGCGCAAGTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGTGCACGTGCACGTGAATGTTGCAATGTGCACAGGCGCAAGTG  985

seq1  AAGGCCAGAGGACACCCTCGGGTATCACCTCTACGGCTCTATGTACCTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGAGGACACCCTCGGGTATCACCTCTACGGCTCTATGTACCTTT  1035

seq1  TTTGCTTTGTGAGACAGGGTCCTTCAGTAGAGTAGAGCTTAGCAAGTGGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTGTGAGACAGGGTCCTTCAGTAGAGTAGAGCTTAGCAAGTGGG  1085

seq1  TGAGGCTAGCTGGCTAGCAAGCCTCAAGCGCCTGCCTATTTCCTCCATCC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTAGCTGGCTAGCAAGCCTCAAGCGCCTGCCTATTTCCTCCATCC  1135

seq1  CAGCTACAGGGTTAGAAGCATGTACTGCCATGACTGGCATTGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACAGGGTTAGAAGCATGTACTGCCATGACTGGCATTGAATTC  1182