BAC Information

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BAC

Clone NameB6Ng01-175H03
Chromosome1 (Build37)
Map Location 96,772,971 - 96,774,170
singlet/doubletsinglet
Overlap genenone
Upstream geneGal3st2, LOC100041596, EG666009, EG619597, Neu4, Pdcd1, LOC666012, LOC666025, LOC100040685
Downstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175H03.bB6Ng01-175H03.g
ACCGA003249GA003250
length9161,194
definitionB6Ng01-175H03.b B6Ng01-175H03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcattttaaatagctgagtagtattccattgtgtaaatgtaca
catttcctgaatccattcttcagctgcacatgtagcacaagatggcctag
tggaccatcattgggaagagaggccccttggtctagcaaattttacatac
ctcagtacaggggaatgccaagaagtgggagtgagtgggtaggggagcag
cgcgggggagggtataggggacttttgggatagcgtttgaaatgtaaatg
aagaaaatatctaatgaaataaacgaagctggactccagaaattcaaata
atcccattaaaaatggggtacagtgccaaacaaagaattctcacatgagg
aatacagaatggctgagaagcacctgaaaaaaatgttcaacatctttaat
catcagggaaatgcaaatcaaaacaacactgagattccacttcacatcag
tcagaatggctaagatcaaaaattcaggtgacagcagatgctggtgagga
agtagagaaagaggaaactcctccattggtggtgggattgcaagctggta
caaccactctggaaatcagtctggcggttcctcagaaaattgaacatagc
actactggaagatccagcaaatacctctccttgggcatatacccagaagt
tgttctgacttgtaataaggggcacatactccacttatgttcatagcaac
ctttatttataatagccaggacctggagacactttgttaattccccagcc
tgagactgctggttcctgtgtggttcattggagagagatatggggggcaa
agcatgagggaattactttacagtagagaaacatgggttttgttttaatt
ttttctttattgaaatggaatttatttttgcatattatatctcaacttgg
gtttctcctccttttg

gaattctggccagctagttcaattcagtcattctgacccaactctctttt
aagttgactgattcaaactggttttccttggtttctcattaaattgctct
tcttagaaaaactgtctctgactgcatgaactgaactgctctgaactgaa
ttgagctcaactgcagtcaacttggtaagacccattaactgcatatcctg
taaagttttatgctctggtgttcttgaaagttccacagtctctcaccttc
ctttagagtcaatttcaataaaggtcagttagaactgctttgcagttagg
tacaatgaggttggccctgaaccaaccaccacaaccaccgtgtagcactt
cttgcacctatgtatgagcatttatggttgctatgagcttttgtgggttt
tgcctttataagttgcccctgggaaatagtcagggtcacagtctcagctc
ccaagtctctgacctgcatccctgatccatcagtcctggggtgtgtgtgt
tcaataaactattcctacttgattgggaatggtgtctgagtgatttgtta
ggttgattcctgggccccagcatactgaacagcaccaaacttaacttcct
ctctcccacactgctcttaagtatccactctttcctgtctgctctcctga
aaagtgaatgtattctatatccaactcattctgtcaaatctttctcttat
ttgtcatttgactaccctcaaattacacttttaaagatggctgctttctt
ctacagactaactttactttcattgtttaggattaaaggtgtgtctacat
tttagtcagaggtattaaagatgtgtactaaggatgtttgcattccagcc
agagggataaaaggatctaaccagatcacatagacttagaaggtctttgg
atgtgatcctttgccagagcagtcagttgctggattaaattcctctatgt
acaggaaggaagaagaaaggttaaacaatgaaactcttaaatagtgtatc
aatagtaaatcaatgatactaaccaatagtagcatccttaatacttctag
agctgtttctgaacattggtgttcttcatctaactataaataaagtctca
ctattgtcaaagttaattaaaatctgtcttggaaacattaaatacattca
tgcttttaagttaaatacctccttgaaaatactcttccattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_96772971_96774170
seq2: B6Ng01-175H03.g_59_1252

seq1  GAATTCTGGCCAGCTAGTTCAATTCAGTCATTCTGACCCAACTCTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCCAGCTAGTTCAATTCAGTCATTCTGACCCAACTCTCTTTT  50

seq1  AAGTTGACTGATTCAAACTGGTTTTCCTTGGTTTCTCATTAAATTGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGACTGATTCAAACTGGTTTTCCTTGGTTTCTCATTAAATTGCTCT  100

seq1  TCTTAGAAAAACTGTCTCTGACTGCATGAACTGAACTGCTCTGAACTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAAAACTGTCTCTGACTGCATGAACTGAACTGCTCTGAACTGAA  150

seq1  TTGAGCTCAACTGCAGTCAACTTGGTAAGACCCATTAACTGCATATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCAACTGCAGTCAACTTGGTAAGACCCATTAACTGCATATCCTG  200

seq1  TAAAGTTTTATGCTCTGGTGTTCTTGAAAGTTCCACAGTCTCTCACCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTTATGCTCTGGTGTTCTTGAAAGTTCCACAGTCTCTCACCTTC  250

seq1  CTTTAGAGTCAATTTCAATAAAGGTCAGTTAGAACTGCTTTGCAGTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGTCAATTTCAATAAAGGTCAGTTAGAACTGCTTTGCAGTTAGG  300

seq1  TACAATGAGGTTGGCCCTGAACCAACCACCACAACCACCGTGTAGCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGAGGTTGGCCCTGAACCAACCACCACAACCACCGTGTAGCACTT  350

seq1  CTTGCACCTATGTATGAGCATTTATGGTTGCTATGAGCTTTTGTGGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACCTATGTATGAGCATTTATGGTTGCTATGAGCTTTTGTGGGTTT  400

seq1  TGCCTTTATAAGTTGCCCCTGGGAAATAGTCAGGGTCACAGTCTCAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTATAAGTTGCCCCTGGGAAATAGTCAGGGTCACAGTCTCAGCTC  450

seq1  CCAAGTCTCTGACCTGCATCCCTGATCCATCAGTCCTGGGGTGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTCTGACCTGCATCCCTGATCCATCAGTCCTGGGGTGTGTGTGT  500

seq1  TCAATAAACTATTCCTACTTGATTGGGAATGGTGTCTGAGTGATTTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAACTATTCCTACTTGATTGGGAATGGTGTCTGAGTGATTTGTTA  550

seq1  GGTTGATTCCTGGGCCCCAGCATACTGAACAGCACCAAACTTAACTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTCCTGGGCCCCAGCATACTGAACAGCACCAAACTTAACTTCCT  600

seq1  CTCTCCCACACTGCTCTTAAGTATCCACTCTTTCCTGTCTGCTCTCCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCACACTGCTCTTAAGTATCCACTCTTTCCTGTCTGCTCTCCTGA  650

seq1  AAAGTGAATGTATTCTATATCCAACTCATTCTGTCAAATCTTTCTCTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAATGTATTCTATATCCAACTCATTCTGTCAAATCTTTCTCTTAT  700

seq1  TTGTCATTTGACTACCCCTCAAATTACACTTTTAAAGATGGCTGCTTTCT  750
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGTCATTTGACTA-CCCTCAAATTACACTTTTAAAGATGGCTGCTTTCT  749

seq1  TCTACAGACTAACTTTACTTTCATTGTTTAGGATTAAAGGTGTGTCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGACTAACTTTACTTTCATTGTTTAGGATTAAAGGTGTGTCTACA  799

seq1  TTTTAGTCAGAGGTATTAAAGATGTGTACTAAGGATGTTTGCATTCCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCAGAGGTATTAAAGATGTGTACTAAGGATGTTTGCATTCCAGC  849

seq1  CAGAGGGATAAAAGGATCTAACCAGATCACATAGACTTAGAAGGTCTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGATAAAAGGATCTAACCAGATCACATAGACTTAGAAGGTCTTTG  899

seq1  GATGTGATCCTTTGCCAGAGCAGTCAGGTTGCTGGATTAAAATTCCTCTA  950
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  GATGTGATCCTTTGCCAGAGCAGTCA-GTTGCTGGATT-AAATTCCTCTA  947

seq1  TGTACAGGAAGGAAGAAGGAAAGGTTAAACAATGAAACTCTTAAATAGTG  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTACAGGAAGGAAGAA-GAAAGGTTAAACAATGAAACTCTTAAATAGTG  996

seq1  TATCAATAGTAAATCAATTGATTACTAACCAATAGTAGCATCC-TAATAC  1049
      ||||||||||||||||| ||| ||||||||||||||||||||| ||||||
seq2  TATCAATAGTAAATCAA-TGA-TACTAACCAATAGTAGCATCCTTAATAC  1044

seq1  TTCCTAGAGCTGTTTCTGAACATTGGTGTTCTCAATCT-ACTATAAATAA  1098
      || |||||||||||||||||||||||||||||  |||| |||||||||||
seq2  TT-CTAGAGCTGTTTCTGAACATTGGTGTTCTTCATCTAACTATAAATAA  1093

seq1  AGTCTCACTA-TGTC-AAGTT-ATTAAAATCCTGTCTTGAAACATATAAA  1145
      |||||||||| |||| ||||| |||||||| |||||||| || | || ||
seq2  AGTCTCACTATTGTCAAAGTTAATTAAAAT-CTGTCTTGGAA-ACATTAA  1141

seq1  ATACCATTAAATGCTTTTAAATTTAATATCTTCCCTTGAAATATAC---T  1192
      ||| ||||  |||||||||| || |||| ||  |||||||| ||||   |
seq2  ATA-CATT-CATGCTTTTAAGTTAAATACCT--CCTTGAAA-ATACTCTT  1186

seq1  TCATTTTG  1200
       |||||||
seq2  CCATTTTG  1194


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