BAC Information

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BAC

Clone NameB6Ng01-181C02
Chromosome1 (Build37)
Map Location 94,574,779 - 94,575,757
singlet/doubletsinglet
Overlap genenone
Upstream geneTwist2, Hdac4, LOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos
Downstream geneGpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181C02.bB6Ng01-181C02.g
ACCGA007376GA007377
length979459
definitionB6Ng01-181C02.b B6Ng01-181C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggatgagtaaggcaggacttagattttcagcatctcagtaa
atctcagatcctaatactctatttaagatatgttcatcacaaggctgtgg
tttcccttttctgtaagtgcttgataggtttaagtagaaagtgacctcag
ctgcaaaaggaagtctgtatccgaagaaggcgtgtgcgtttagcctgtac
acagtgtgtgcagatggaggaactgaaactcacacctacaagtgctgacg
ttacagctacagtaggcatgctatgttttacacctgtgtcataatgtgat
tgataatttatagacaaatcaatagatatccatatacagggcctaagaaa
aatgttgagaccgcatggattcagcacacaagcccatgtttgtaaatatt
tccttgatgtgtaaatgatatacttttgtacatggtatatatatatatat
atatatatatatatatagtcattagttttaaagtgttcatatgctgaatt
cccaaattgctcttaaatctacttactctattaaggattgagaaatgcct
tttactttattggaatgttgtggggtttctaggaataccttctaattgtt
tacctgttactcccagtgggctggagaaacttcagcaggtgagcttactg
agagaagtgggagttttcaactccagggtaagagcctggagaatgagctt
gcttagagaactgtgtatggggtggggcacaagcccagaggcatggagca
tgggggtttccaatgggctttctgtgagtcaagatccacagataccaccc
cagagcccagtcagatgacatactgagtcctgggaaagcctagggctcaa
ccacactttgcgtttgctttcccagtaccaactctaaaggagaggagaca
tcagaacttcacctcggttccagaggctgcttaattattaaagaaagttc
cattatccataatctactatgtgtgcagt
ctaatttgatatctgtcaaatttctttttaggaagaaaggtttaagagat
ggttttagttcttttgctaagttgtaataaagttagcgtcaagaatagaa
cgtgcccactcctcattaagtaaaggttacacaataagaaatacaatgtg
ttttcataattacactaaaaagagatataggcttgggacaaatttatatt
caaggaaaagcattcaggttcaaggatgaagccactggtgtacctatgat
aaggcaaagccatataaaactgttgccttgaacttatgatgagcagagag
aatggagcactgctttgaacttaatatcaacatccttctgtaactcccat
tttgtatagtattttatctatgaggtaaatctctaagaacttagtctata
aaaaggccagagagtagaaataaaggtgatatggtgtgatgtgatggctt
ggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_94574779_94575757
seq2: B6Ng01-181C02.b_43_1021 (reverse)

seq1  ACTGCACACAATAATTTGATTATGGATAATGGAACTGTCTTTAATAATTA  50
      ||||||||||   | | ||||||||||||||||||| |||||||||||||
seq2  ACTGCACACA--TAGTAGATTATGGATAATGGAACTTTCTTTAATAATTA  48

seq1  AGCAGCCTCTGGAACCGAGGTGAAGTTCTGATGTCTCCTCTCCTTTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTCTGGAACCGAGGTGAAGTTCTGATGTCTCCTCTCCTTTAGAG  98

seq1  TTGGTACTGGGAAAGCAAACGC-AAGTGTGGTTGAGCCCTAGGC-TTCCC  148
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  TTGGTACTGGGAAAGCAAACGCAAAGTGTGGTTGAGCCCTAGGCTTTCCC  148

seq1  AGGACTCAGTATGTCATCTGACTGGGCTCTGGGGTGGTATCTGTGGATCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCAGTATGTCATCTGACTGGGCTCTGGGGTGGTATCTGTGGATCT  198

seq1  TGACTCACAGAAAGCCCATTGGAAACCCCCATGCTCCATGCCTCTGGGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACAGAAAGCCCATTGGAAACCCCCATGCTCCATGCCTCTGGGCT  248

seq1  TGTGCCCCACCCCATACACAGTTCTCTAAGCAAGCTCATTCTCCAGGCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCCACCCCATACACAGTTCTCTAAGCAAGCTCATTCTCCAGGCTC  298

seq1  TTACCCTGGAGTTGAAAACTCCCACTTCTCTCAGTAAGCTCACCTGCTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGGAGTTGAAAACTCCCACTTCTCTCAGTAAGCTCACCTGCTGA  348

seq1  AGTTTCTCCAGCCCACTGGGAGTAACAGGTAAACAATTAGAAGGTATTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCCAGCCCACTGGGAGTAACAGGTAAACAATTAGAAGGTATTCC  398

seq1  TAGAAACCCCACAACATTCCAATAAAGTAAAAGGCATTTCTCAATCCTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACCCCACAACATTCCAATAAAGTAAAAGGCATTTCTCAATCCTTA  448

seq1  ATAGAGTAAGTAGATTTAAGAGCAATTTGGGAATTCAGCATATGAACACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTAAGTAGATTTAAGAGCAATTTGGGAATTCAGCATATGAACACT  498

seq1  TTAAAACTAATGACTATATATATATATATATATATATATATATATACCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTAATGACTATATATATATATATATATATATATATATATACCAT  548

seq1  GTACAAAAGTATATCATTTACACATCAAGGAAATATTTACAAACATGGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAAGTATATCATTTACACATCAAGGAAATATTTACAAACATGGGC  598

seq1  TTGTGTGCTGAATCCATGCGGTCTCAACATTTTTCTTAGGCCCTGTATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCTGAATCCATGCGGTCTCAACATTTTTCTTAGGCCCTGTATAT  648

seq1  GGATATCTATTGATTTGTCTATAAATTATCAATCACATTATGACACAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCTATTGATTTGTCTATAAATTATCAATCACATTATGACACAGGT  698

seq1  GTAAAACATAGCATGCCTACTGTAGCTGTAACGTCAGCACTTGTAGGTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACATAGCATGCCTACTGTAGCTGTAACGTCAGCACTTGTAGGTGT  748

seq1  GAGTTTCAGTTCCTCCATCTGCACACACTGTGTACAGGCTAAACGCACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAGTTCCTCCATCTGCACACACTGTGTACAGGCTAAACGCACAC  798

seq1  GCCTTCTTCGGATACAGACTTCCTTTTGCAGCTGAGGTCACTTTCTACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTTCGGATACAGACTTCCTTTTGCAGCTGAGGTCACTTTCTACTT  848

seq1  AAACCTATCAAGCACTTACAGAAAAGGGAAACCACAGCCTTGTGATGAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATCAAGCACTTACAGAAAAGGGAAACCACAGCCTTGTGATGAAC  898

seq1  ATATCTTAAATAGAGTATTAGGATCTGAGATTTACTGAGATGCTGAAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAAATAGAGTATTAGGATCTGAGATTTACTGAGATGCTGAAAAT  948

seq1  CTAAGTCCTGCCTTACTCATCCAGAGAATTC  979
      |||||||||||||||||||||||||||||||
seq2  CTAAGTCCTGCCTTACTCATCCAGAGAATTC  979