BAC Information

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BAC

Clone NameB6Ng01-181I24
Chromosome1 (Build37)
Map Location 45,927,095 - 45,927,812
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041752, LOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297
Downstream geneLOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855, Slc39a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181I24.bB6Ng01-181I24.g
ACCGA007689GA007690
length1,165721
definitionB6Ng01-181I24.b B6Ng01-181I24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagcgctgcatcccattttttaatggggttatttgatt
tttttagagtccaccttcctgaattctttacatatattgaatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgacggtgtcttttaccttacagaagctttgcaatttt
atgaggttccatttgtcaattctcaatcttacaaaacaaaccattgctgt
tctattcaggaatttttcccctgtacccgtatatttgaggcttttcccca
ctttctcttctataagtttcagtgtctctggttttatgtaaagttccttg
atccacttagatttgaccttagtacaagaagataggaatggatcaattag
cattcttctacatgttaaccaccagttgtgccagcaccatttgttgaaaa
tgctgtctttttcccactgaatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctatttcattc
gtctacttgtctgttgctataccagtaccatgcagttttttatcacaatt
gctctgtagtaaagctttaggtcaggcatggtgattacaccagaggttct
tttattctttagaagagtttttgctaccctaggttcttttgttattacag
gtgaatttgcagattgccctttctaattcgttgaagaattgagttggaat
tttgatggggattgcattgaatctgtagattgcttttggcaagatagcca
tttttacaatgttgatcctgccaatccatgaggatgggagatctttccat
ctttcttcagagacttgaagttcttataatacagatctttcacttcctta
gttagagtcacaccaaggtattttatattatttgtgactattgagaaggg
tgttgtttcctaatttctttctcagcctgtttatcctatgtgtagagaaa
ggccattgacttgtttgagttaattttatatcagctacttcactgagctt
gttatcagtttaggagtctctggtgaaacttttggtcacttatatatact
atcatttcattccaaggaattccacggaatgcgccttcctatcttggtag
aacatcatctgatac
gaattctctgtactattaaaaaaatttaaagcgctatctatcaagctgaa
agaatgttatgattgccaccacataaccaaatgataggcgtgtataacaa
ggacattgaaatacacaaaatacacattaaaatgatctgtagaactgtga
ttcagatcatccatataagattagctataacttggatcacattaaaatct
tgattataatcatattgtttaaatatgaaagatgaagtactaatgaagtt
gttcaaagaaaaataaaaggtaatatatcacaatgttaataaaacaaaac
tctaatgaggtaaaaataaatgggttcattgagggcttagataactgaat
attaattgagataaaataaaaatttcatagccatatatatatatatgtgt
gtatatatgtatgtatgtatatatatatatacatatatatatatatatga
agaactttacattcatgcatagcattttttatatgtatgttactactcaa
gttgtatttttaaagcacagtggtgttctaagtccgttttgaacatttag
ggagagcactgtgaaggctgataaccctcttcaccaatgcttccatgaga
agctctctgaaaatgagaaagtggggaggaagaccttttgctctaatgaa
tttttataagttagactgcatgtaagatgtggcataagggctattggttt
ttacttcttttacccaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_45927095_45927812
seq2: B6Ng01-181I24.g_66_786

seq1  GAATTCTCTGTACTATTAAAAAAATTTAAAGCGCTATCTATCAAGCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTACTATTAAAAAAATTTAAAGCGCTATCTATCAAGCTGAA  50

seq1  AGAATGTTATGATTGCCACCACATAACCAAATGATAGGCGTGTATAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTATGATTGCCACCACATAACCAAATGATAGGCGTGTATAACAA  100

seq1  GGACATTGAAATACACAAAATACACATTAAAATGATCTGTAGAACTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGAAATACACAAAATACACATTAAAATGATCTGTAGAACTGTGA  150

seq1  TTCAGATCATCCATATAAGATTAGCTATAACTTGGATCACATTAAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCATCCATATAAGATTAGCTATAACTTGGATCACATTAAAATCT  200

seq1  TGATTATAATCATATTGTTTAAATATGAAAGATGAAGTACTAATGAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATAATCATATTGTTTAAATATGAAAGATGAAGTACTAATGAAGTT  250

seq1  GTTCAAAGAAAAATAAAAGGTAATATATCACAATGTTAATAAAACAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAGAAAAATAAAAGGTAATATATCACAATGTTAATAAAACAAAAC  300

seq1  TCTAATGAGGTAAAAATAAATGGGTTCATTGAGGGCTTAGATAACTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGAGGTAAAAATAAATGGGTTCATTGAGGGCTTAGATAACTGAAT  350

seq1  ATTAATTGAGATAAAATAAAAATTTCATAGCCATATATATATATATGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGAGATAAAATAAAAATTTCATAGCCATATATATATATATGTGT  400

seq1  GTATATATGTATGTATGTATATATATATATACATATATATATATATATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATGTATGTATGTATATATATATATACATATATATATATATATGA  450

seq1  AGAACTTTACAATCATGCAAAGCATTTTTTATATGTATGTTACTACTCAA  500
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AGAACTTTACATTCATGCATAGCATTTTTTATATGTATGTTACTACTCAA  500

seq1  GTTGTATTTTTAAAGCACAGTGGTGTTCTAAGTCCGTTTTGAACATTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATTTTTAAAGCACAGTGGTGTTCTAAGTCCGTTTTGAACATTTAG  550

seq1  GGAGAGCACTGTGAAGGCTGATAACCCTCTTCACCAATGCTTCCATGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCACTGTGAAGGCTGATAACCCTCTTCACCAATGCTTCCATGAGA  600

seq1  AGCTCTCTG-AAATGAGAAAGTGGGGAGGAAGACC-TTTGCTCTAGTGCA  648
      ||||||||| ||||||||||||||||||||||||| ||||||||| || |
seq2  AGCTCTCTGAAAATGAGAAAGTGGGGAGGAAGACCTTTTGCTCTAATG-A  649

seq1  ATTTATATCAGTTAGACTGCA-GGAAGATGTGTCATAA-GGCTATTGGCT  696
      |||| ||| |||||||||||| | |||||||| ||||| ||||||||| |
seq2  ATTTTTATAAGTTAGACTGCATGTAAGATGTGGCATAAGGGCTATTGGTT  699

seq1  TTAACTTCTTTTCTCCAAAGGA  718
      || |||||||||  ||||||||
seq2  TTTACTTCTTTTACCCAAAGGA  721