BAC Information

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BAC

Clone NameB6Ng01-181O02
Chromosome1 (Build37)
Map Location 191,875,932 - 192,025,363
singlet/doubletdoublet
Overlap geneProx1
Upstream geneKcnk2, LOC100042424, LOC100039307, Cenpf, Ptpn14, LOC100042438, Smyd2
Downstream geneLOC100039394, EG666975, Rps6kc1, Angel2, Vash2, LOC100039445, LOC666987, 9630055N22Rik, 1700022P22Rik, Tatdn3, Nsl1, 9130211I03Rik, 4933417M04Rik, Atf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181O02.bB6Ng01-181O02.g
ACCGA007922GA007923
length1,122735
definitionB6Ng01-181O02.b B6Ng01-181O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,875,932 - 191,877,055)(192,024,632 - 192,025,363)
sequence
gaattccaagtgtggccttgctgagtgagtcacatctccattccacatga
tttgggctgtatttagccaaggacaccaaaggatttcttgatgaattatt
taaggaatgggctgagagagcagagagtcaccctgcgatctgagctggtt
tctgcagaatcaactggaggccacaaagaggtgtaacaattggagtctat
gtaaggagttggggagccaaaaaatctagagaaagtttttagttctgatt
tcaagaaacaagtcaactgagagctggggaaactgttcagtgatggagca
ctcgcctagcttgaaaatgccaacagaaaaagtccccactggcaactaga
attgatttggtttcattggatctgttaggatatccaggctgttttatgct
agtatgagtactctgtttactccaaaggcttacactgtatcaaacacaca
cacttgggcatgcacacatgcgcgcgcgtgcacacacacacacacacaca
cacacacacacacatacacacacacacacacacacactactcttagagac
caatcttttcctgatttcaagtcttgtaagataataaaacgtagaacaat
cattgtcacttcacaaaagctttgtatttggtcttgagtggctcacatga
aaagtcttccatcaattaccaggaactgagatttttttttttttttaatc
tcatgtgatgttcattctaacatcaatatttgtaagtgatataggaaagc
caaatgaaagagaacaggaaaacatgtttaatgaaggtcattgattctct
ggttatcctaaacattgtgaaacaggagggtgaggggctgctcttcacct
cctcttgacccagcaccttcaaaatggctccttcatattggtaacatata
cgttccctaacttccagacttagtgtccaaatccaggcacatgccatctc
ctcctgggcaatgtctattcatatgagcattcttcttcaggcagcctggg
tacaacattacaccagttcttctcttctgattagcatctttactcagggc
ctgttccttttctgcttgattgtggtcccaactcttctcaaggagctggt
tgttgagagtgaaagttcgcta
gaattcttcagtgtccgccttggactgtacttcagaggcctgggaaatga
accaatgtagcaatgggactatcaggccattggttagacacatacagatg
tctttgtcttgttactgagaaagtcagagatgatcagaacagttgttttc
tatttcataagcaaagacatgtagggttgctagtgactgctcagcagtca
gggaggcagacagacggtcaaactcaagctaagtttgcatctctgtgagt
gtctgtgttgtgcttgcctgggcgcctgtcacacacacggagcagctcat
gatggtgaggacatcagcatttgtccgtctctgtgcacaaccatgcccct
gtgttaatggagaatctctcctccaagccttgggaaatgggttcaccaat
ggaaatccttcacaccagaaaatggaagagatggttacatggcttgcagg
gtaatagtttagactctttacaacatcccacccaagtgtcttccgacaat
ggttcgaagggaagccagtcacaacgtcagaaatgtgacaaccaaaagac
caccaaattctaaggaaagctaagtatggagagagtgtcctaattaccca
aggtcaaagcacaaagtcaagttgctcaagcctcagccactaactgtgac
cgcataagactacaaggaagagatgcccagatgagccatcaaccccagaa
ccgtaactcaatcccccattcttactgacctacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191875932_191877055
seq2: B6Ng01-181O02.b_45_1166

seq1  GAATTCCAAGTGTGGCCTTGCTGAGTGAGTCACATCTCCATTCCACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTGTGGCCTTGCTGAGTGAGTCACATCTCCATTCCACATGA  50

seq1  TTTGGGCTGTATTTAGCCAAGGACACCAAAGGATTTCTTGATGAATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTGTATTTAGCCAAGGACACCAAAGGATTTCTTGATGAATTATT  100

seq1  TAAGGAATGGGCTGAGAGAGCAGAGAGTCACCCTGCGATCTGAGCTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATGGGCTGAGAGAGCAGAGAGTCACCCTGCGATCTGAGCTGGTT  150

seq1  TCTGCAGAATCAACTGGAGGCCACAAAGAGGTGTAACAATTGGAGTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGAATCAACTGGAGGCCACAAAGAGGTGTAACAATTGGAGTCTAT  200

seq1  GTAAGGAGTTGGGGAGCCAAAAAATCTAGAGAAAGTTTTTAGTTCTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAGTTGGGGAGCCAAAAAATCTAGAGAAAGTTTTTAGTTCTGATT  250

seq1  TCAAGAAACAAGTCAACTGAGAGCTGGGGAAACTGTTCAGTGATGGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAACAAGTCAACTGAGAGCTGGGGAAACTGTTCAGTGATGGAGCA  300

seq1  CTCGCCTAGCTTGAAAATGCCAACAGAAAAAGTCCCCACTGGCAACTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCTAGCTTGAAAATGCCAACAGAAAAAGTCCCCACTGGCAACTAGA  350

seq1  ATTGATTTGGTTTCATTGGATCTGTTAGGATATCCAGGCTGTTTTATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTGGTTTCATTGGATCTGTTAGGATATCCAGGCTGTTTTATGCT  400

seq1  AGTATGAGTACTCTGTTTACTCCAAAGGCTTACACTGTATCAAACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGTACTCTGTTTACTCCAAAGGCTTACACTGTATCAAACACACA  450

seq1  CACTTGGGCATGCACACATGCGCGCGCGTGCACACACACACACACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGGCATGCACACATGCGCGCGCGTGCACACACACACACACACACA  500

seq1  CACACACACACACATACACACACACACACACACACACTACTCTTAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACATACACACACACACACACACACACTACTCTTAGAGAC  550

seq1  CAATCTTTTCCTGATTTCAAGTCTTGTAAGATAATAAAACGTAGAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTTCCTGATTTCAAGTCTTGTAAGATAATAAAACGTAGAACAAT  600

seq1  CATTGTCACTTCACAAAAGCTTTGTATTTGGTCTTGAGTGGCTCACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCACTTCACAAAAGCTTTGTATTTGGTCTTGAGTGGCTCACATGA  650

seq1  AAAGTCTTCCATCAATTACCAGGAACTGAGATTTTTTTTTTTTTTTAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTCCATCAATTACCAGGAACTGAGATTTTTTTTTTTTTTTAATC  700

seq1  TCATGTGATGTTCATTCTAACATCAATATTTGTAAGTGATATAGGAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGATGTTCATTCTAACATCAATATTTGTAAGTGATATAGGAAAGC  750

seq1  CAAATGAAAGAGAACAGGAAAACATGTTTAATGAAGGTCATTGATTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAAAGAGAACAGGAAAACATGTTTAATGAAGGTCATTGATTCTCT  800

seq1  GGTTATCCTAAACATTGTGAAACAGGAGGGTGAGGGGCTGCTCTTCACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCCTAAACATTGTGAAACAGGAGGGTGAGGGGCTGCTCTTCACCT  850

seq1  CCTCTTGACCCAGCACCTTCAAAATGGCTCCTTCATATTGGTAACATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGACCCAGCACCTTCAAAATGGCTCCTTCATATTGGTAACATATA  900

seq1  CGTTCCCTAACTTCCAGACTTAGTGTCCAAATCCAGGCACATGCCATCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCTAACTTCCAGACTTAGTGTCCAAATCCAGGCACATGCCATCTC  950

seq1  CTCCT-GGCAATGTCTATTCATATGAGCA-TCTTCTTCAGGCAGCCT-GG  997
      ||||| ||||||||||||||||||||||| ||||||||||||||||| ||
seq2  CTCCTGGGCAATGTCTATTCATATGAGCATTCTTCTTCAGGCAGCCTGGG  1000

seq1  TAC-ACA-TACACCAGTCCTCCTCTTCTGA-TAACATCTTTACCTCAGGG  1044
      ||| ||| ||||||||| || ||||||||| || |||||||| |||||||
seq2  TACAACATTACACCAGTTCTTCTCTTCTGATTAGCATCTTTA-CTCAGGG  1049

seq1  -CTGTT-CTTTTCTGCCTTCCTTTGTGGTCCCCCACCTCTTCTTCAAGAG  1092
       ||||| |||||||||  |   |||||||  |||| |||||||  | |||
seq2  CCTGTTCCTTTTCTGC--TTGATTGTGGT--CCCAACTCTTCTCAAGGAG  1095

seq1  CTGTTGTTTGGAAGAGTGAAAGGGTTTCGCTA  1124
      ||| |  |||  ||||||||||   |||||||
seq2  CTGGTTGTTG--AGAGTGAAAG---TTCGCTA  1122

seq1: chr1_192024632_192025363
seq2: B6Ng01-181O02.g_69_803 (reverse)

seq1  GTGTAGGTCAGTAAG-ATTGGGGATTGAGTTACGGTTCTGGGGTTGATGG  49
      ||||||||||||||| || |||||||||||||||||||||||||||||||
seq2  GTGTAGGTCAGTAAGAATGGGGGATTGAGTTACGGTTCTGGGGTTGATGG  50

seq1  CTCATCTGGGCATCTCTTCCTTGTAGTCTTATGCGGTCACAGTTAGTGGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGGGCATCTCTTCCTTGTAGTCTTATGCGGTCACAGTTAGTGGC  100

seq1  TGAGGCTTGAGCAACTTGACTTTGTGCTTTGACCTTGGGTAATTAGGACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTGAGCAACTTGACTTTGTGCTTTGACCTTGGGTAATTAGGACA  150

seq1  CTCTCTCCATACTTAGCTTTCCTTAGAATTTGGTGGTCTTTTGGTTGTCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCATACTTAGCTTTCCTTAGAATTTGGTGGTCTTTTGGTTGTCA  200

seq1  CATTTCTGACGTTGTGACTGGCTTCCCTTCGAACCATTGTCGGAAGACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGACGTTGTGACTGGCTTCCCTTCGAACCATTGTCGGAAGACAC  250

seq1  TTGGGTGGGATGTTGTAAAGAGTCTAAACTATTACCCTGCAAGCCATGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGGATGTTGTAAAGAGTCTAAACTATTACCCTGCAAGCCATGTA  300

seq1  ACCATCTCTTCCATTTTCTGGTGTGAAGGATTTCCATTGGTGAACCCATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCTTCCATTTTCTGGTGTGAAGGATTTCCATTGGTGAACCCATT  350

seq1  TCCCAAGGCTTGGAGGAGAGATTCTCCATTAACACAGGGGCATGGTTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGCTTGGAGGAGAGATTCTCCATTAACACAGGGGCATGGTTGTG  400

seq1  CACAGAGACGGACAAATGCTGATGTCCTCACCATCATGAGCTGCTCCGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGACGGACAAATGCTGATGTCCTCACCATCATGAGCTGCTCCGTG  450

seq1  TGTGTGACAGGCGCCCAGGCAAGCACAACACAGACACTCACAGAGATGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGACAGGCGCCCAGGCAAGCACAACACAGACACTCACAGAGATGCA  500

seq1  AACTTAGCTTGAGTTTGACCGTCTGTCTGCCTCCCTGACTGCTGAGCAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGCTTGAGTTTGACCGTCTGTCTGCCTCCCTGACTGCTGAGCAGT  550

seq1  CACTAGCAACCCTACATGTCTTTGCTTATGAAATAGAAAACAACTGTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCAACCCTACATGTCTTTGCTTATGAAATAGAAAACAACTGTTCT  600

seq1  GATCATCTCTGACTTTCTCAGTAACAAGACAAAGACATCTGTATGTGTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCTCTGACTTTCTCAGTAACAAGACAAAGACATCTGTATGTGTCT  650

seq1  AACCAATGGCCTGATAGTCCCATTGCTACATTGGTTCATTTCCCAGGCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATGGCCTGATAGTCCCATTGCTACATTGGTTCATTTCCCAGGCCT  700

seq1  CTGAAGTACAGTCCTGGCC--ACACTGAAGAATTC  732
      ||||||||||||||  | |  ||||||||||||||
seq2  CTGAAGTACAGTCCAAGGCGGACACTGAAGAATTC  735