BAC Information

Click to search

BAC

Clone NameB6Ng01-182A10
Chromosome1 (Build37)
Map Location 148,426,054 - 148,427,220
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182A10.bB6Ng01-182A10.g
ACCGA008028GA008029
length1,1671,154
definitionB6Ng01-182A10.b B6Ng01-182A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacatctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaacttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttttgaaag
gacccagatgtagctgtctcttgtgagactatgccggggccctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagaagccaggagctaaagggatctgcaacccta
tagtggaacacatatgagctaccagtaccccggagctcttgactctagct
gcatatattatcaaagatgctagtcgcatcactgggaaagagagccattg
gacttgcaactttaatattgcccagtacaggaataccatgcccaaaaggg
gagtggtggacactgag
gaattccatgcctgtttctgccttcttgcaaggcttcttatatcagttta
ttcatcaaaaaaaaaaaaaaaagtgggagaggaggcattgctgatttgtt
tgtgaacaccacgaaacaccagcctttgtttttggtacccatagccaact
gcattaagttaaaatagaacacaatattacttaagtactctaaagtgtga
aattaaaagcctccttagagattagcttcaaacagatttattccctgata
attaatactcccattaaaatgtgctttatattaaattgtttggtctgtgt
ataacatctcgtaacacaaatatgaaattaagatagcaaaataataatga
ataatgccaacttggatggccattgcagtaatgagaatatatgatgagag
cctcttctatagagttttcaataaacaggtcaagagaatttatcatcttt
taatctcaacatttctctgtgttaggacttttgttattctatgcttactc
ataaaaataaaagatgcattctggacaaaagaggtaaagaataaagcttt
actctgcttaaactaagtgtggctcgagtcctgtaagcagcatgcttctt
acagctagtgtggcttacaatgcagtataaaggggatagtgtcaaattaa
aaaacatgaaaggttaatttagatccttcttaataaatcttttattgaaa
agacactatcgtcaataacgatttaaattatgtattcttccattcttcat
attatttttcaataaacattagaatgaaaatttcaaaatagccctttctt
acagagcactcaagtttcaagatttaatgtaaaactcatgctattataga
gtaaatataatctcgattttcactgggaaaagggagggcataaaatatac
ataaagcactggaaaatttaattaaatttcatatatatatgttgatattg
atatttcattacatttaaatatatcctcttctgttttccctctgaaagtc
cctatcccctccctcatgcccctgatcacaaacccacccactctgctttc
tggcctgggcattccctacaacttgcgcaagagctatttgcatcgatagt
gtaaaataatagtaaatacttcctagcaaaatattttccagagtttaact
catt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148426054_148427220
seq2: B6Ng01-182A10.g_65_1218 (reverse)

seq1  AATGAGTTAAAAATTATTGAAAAATAATTTACCTAGGAAGTTATTTTACT  50
      ||||||||  ||| | | |||||   ||||  |||||||||   ||||||
seq2  AATGAGTT--AAACTCTGGAAAA--TATTTTGCTAGGAAGT--ATTTACT  44

seq1  AATTATTTTACA-TA-CGATGTAAATAAGGCTCTTGCGCCAG-TGTAGGG  97
       ||||||||||| || ||||| |||||  |||||||||| || |||| ||
seq2  -ATTATTTTACACTATCGATGCAAATA--GCTCTTGCGCAAGTTGTA-GG  90

seq1  GAATGCCAGGGCCAGGAAGCAAGAGTGGGTGGGTTGGTGATCAGGGGCAT  147
      |||||||  |||||| |||| |||||||||||||| ||||||||||||||
seq2  GAATGCCCAGGCCAGAAAGC-AGAGTGGGTGGGTTTGTGATCAGGGGCAT  139

seq1  GAGGGAGGGGATAGGGACTTTTCAGAGGGAAAAACAGAAAGAGGATAATA  197
      |||||||||||||||||| |||||||||| ||||||| |||||||| |||
seq2  GAGGGAGGGGATAGGGAC-TTTCAGAGGG-AAAACAG-AAGAGGAT-ATA  185

seq1  TTTTAAATGTAAATGAAATATCAATATCAACATATATATATGAAATTTAA  247
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  -TTTAAATGT-AATGAAATATCAATATCAACATATATATATGAAATTTAA  233

seq1  TTAAATTTTCCAGTGCTTTATGTATATTTTATGCCCT-CCTTTTCCCAGT  296
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTAAATTTTCCAGTGCTTTATGTATATTTTATGCCCTCCCTTTTCCCAGT  283

seq1  GAAAATCGAGATTATATTTACTCTATAATAGCATGAGTTTTACATTAAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCGAGATTATATTTACTCTATAATAGCATGAGTTTTACATTAAAT  333

seq1  CTTGAAACTTGAGTGCTCTGTAAGAAAGGGCTATTTTGAAATTTTCATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACTTGAGTGCTCTGTAAGAAAGGGCTATTTTGAAATTTTCATTC  383

seq1  TAATGTTTATTGAAAAATAATATGAAGAATGGAAGAATACATAATTTAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTATTGAAAAATAATATGAAGAATGGAAGAATACATAATTTAAA  433

seq1  TCGTTATTGACGATAGTGTCTTTTCAATAAAAGATTTATTAAGAAGGATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTATTGACGATAGTGTCTTTTCAATAAAAGATTTATTAAGAAGGATC  483

seq1  TAAATTAACCTTTCATGTTTTTTAATTTGACACTATCCCCTTTATACTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAACCTTTCATGTTTTTTAATTTGACACTATCCCCTTTATACTGC  533

seq1  ATTGTAAGCCACACTAGCTGTAAGAAGCATGCTGCTTACAGGACTCGAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAGCCACACTAGCTGTAAGAAGCATGCTGCTTACAGGACTCGAGC  583

seq1  CACACTTAGTTTAAGCAGAGTAAAGCTTTATTCTTTACCTCTTTTGTCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTAGTTTAAGCAGAGTAAAGCTTTATTCTTTACCTCTTTTGTCCA  633

seq1  GAATGCATCTTTTATTTTTATGAGTAAGCATAGAATAACAAAAGTCCTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATCTTTTATTTTTATGAGTAAGCATAGAATAACAAAAGTCCTAA  683

seq1  CACAGAGAAATGTTGAGATTAAAAGATGATAAATTCTCTTGACCTGTTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAAATGTTGAGATTAAAAGATGATAAATTCTCTTGACCTGTTTA  733

seq1  TTGAAAACTCTATAGAAGAGGCTCTCATCATATATTCTCATTACTGCAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACTCTATAGAAGAGGCTCTCATCATATATTCTCATTACTGCAAT  783

seq1  GGCCATCCAAGTTGGCATTATTCATTATTATTTTGCTATCTTAATTTCAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCCAAGTTGGCATTATTCATTATTATTTTGCTATCTTAATTTCAT  833

seq1  ATTTGTGTTACGAGATGTTATACACAGACCAAACAATTTAATATAAAGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTACGAGATGTTATACACAGACCAAACAATTTAATATAAAGCA  883

seq1  CATTTTAATGGGAGTATTAATTATCAGGGAATAAATCTGTTTGAAGCTAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAATGGGAGTATTAATTATCAGGGAATAAATCTGTTTGAAGCTAA  933

seq1  TCTCTAAGGAGGCTTTTAATTTCACACTTTAGAGTACTTAAGTAATATTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAGGAGGCTTTTAATTTCACACTTTAGAGTACTTAAGTAATATTG  983

seq1  TGTTCTATTTTAACTTAATGCAGTTGGCTATGGGTACCAAAAACAAAGGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATTTTAACTTAATGCAGTTGGCTATGGGTACCAAAAACAAAGGC  1033

seq1  TGGTGTTTCGTGGTGTTCACAAACAAATCAGCAATGCCTCCTCTCCCACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTCGTGGTGTTCACAAACAAATCAGCAATGCCTCCTCTCCCACT  1083

seq1  TTTTTTTTTTTTTTTGATGAATAAACTGATATAAGAAGCCTTGCAAGAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGATGAATAAACTGATATAAGAAGCCTTGCAAGAAG  1133

seq1  GCAGAAACAGGCATGGAATTC  1167
      |||||||||||||||||||||
seq2  GCAGAAACAGGCATGGAATTC  1154