BAC Information

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BAC

Clone NameB6Ng01-182I20
Chromosome1 (Build37)
Map Location 67,480,775 - 67,481,943
singlet/doubletsinglet
Overlap genenone
Upstream geneMtap2, C030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Downstream geneKif22-ps, Erbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182I20.bB6Ng01-182I20.g
ACCGA008410GA008411
length1,1801,141
definitionB6Ng01-182I20.b B6Ng01-182I20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaattgagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccataaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacaaccttctcaatagtcacaaattatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgatgaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatgtattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatgttcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcgtgtagaaagaatgcgaatcgatccatactta
ttctccttgtactaaggtcaaatctagtgatcaggactttcacataacag
agaacctgaaacttatagagaagaaagtggggaaagctgaagaaattggc
caaggaaaatctggaacaggaacgcatgcctggctgtagatcggagattg
acaaattggaaaccttaatgaaactctcca
gaattctttcaaaattatattgcaaaaatagagatgggacatttaaatgc
atggtacctggaagagaattgaaaactttgtcttaatctgaaataaacaa
ttttttattaaaatatatatattaacagagaggaaaacccagatattgca
agagagaattgtgaatttttcataagactttttcttaaacataatatatt
ctttaaataaatgccagaataccacactggataagggaaatgtgttgctg
tctttctcttctatctaatactagctttagattttaatcatatattctga
tattccacactatattttgaagataataaaaacaatacctaataatcagt
gatgataatagttacttaataaatattaggaattaatgaataagatatct
aagtaagtacaataagcctgttctctaaaagatagacatgtgatacaaaa
atacttaatatctttatttcaaaacttatgcagatttggaaattattgca
ctaaatacaagaaaaggcatacaattaatttagattgtgaacaacagtac
agtacaagatcttgtcctgtacagtggaggactggtccttctgtgtgctt
aaggaagaaagcattcccttgtttaacagagccaacttactttatttggt
ttgtggccactgatgctcttgtattgaagctagcagcacacctctgattg
ttttgctatatcaggcatctggtctcattgtcaccctgacttctctgacc
attgctctcttacaaacacaacaactggtgatgacattgggtctatctgg
tcaaatgatgataatctaactgtaagacccttaacttcaagcatgggacc
cttttgccatgcaaagttgtgtactgctagattgcagcagcatctctaag
aaaggataaggtttgtttgttctacctcagcaactaacagtgtagacaat
tctttacatgctctacagactgagccacccaatattatagatataaaagc
tacattctgtcaatctcgaaagtatgttggaaaagaatgcatgcccttat
ctgaacatcacaattgtgtggtgtgtcctcacttgttataacttctacca
taattgcttcagttgtatcatgcatcatattcaaactatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67480775_67481943
seq2: B6Ng01-182I20.g_61_1201 (reverse)

seq1  TAATAGTTTTAAATATTTGATGTCCATGATACAAAAACCTGGAAGGCAAA  50
      ||||||||| |   || |||||  ||||||||||    |||  | |||  
seq2  TAATAGTTTGA---ATATGATG--CATGATACAA----CTG--AAGCA--  37

seq1  TTTATTAGGTTAGAATTATATAACAAAGTGAAGACCACACCAACACCAAA  100
         |||| | ||||| | |||||| |||||| || |||||| ||||  ||
seq2  ---ATTATGGTAGAAGT-TATAAC-AAGTGAGGA-CACACC-ACAC--AA  78

seq1  TTGTGATGTTTCCAAGATAAAGGCATGCA-TCTTTTCCAACATACTTTCG  149
      ||||||||||    |||||| |||||||| ||||||||||||||||||| 
seq2  TTGTGATGTT---CAGATAAGGGCATGCATTCTTTTCCAACATACTTTC-  124

seq1  GAGATTGACAGAATGTAGCTTTTATAATTCTTATATATTGGGTGGCTCAG  199
      ||||||||||||||||||||||||||  |||   ||||||||||||||||
seq2  GAGATTGACAGAATGTAGCTTTTATA--TCTATAATATTGGGTGGCTCAG  172

seq1  TTCTGTAGAGCATGTAAGAATTTGTCTACACTGTTAGTTGCTGAGGTAGA  249
       ||||||||||||||||  | |||||||||||||||||||||||||||||
seq2  -TCTGTAGAGCATGTAAAGAATTGTCTACACTGTTAGTTGCTGAGGTAGA  221

seq1  ACAAACAAACCTTATCCTTTCTTAGAGATGCTGCTGCAATCTAGCAGTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACCTTATCCTTTCTTAGAGATGCTGCTGCAATCTAGCAGTAC  271

seq1  ACAACTTTGCATGGCAAAAGGGTCCCATGCTTGAAGTTAAGGGTCTTACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTGCATGGCAAAAGGGTCCCATGCTTGAAGTTAAGGGTCTTACA  321

seq1  GTTAGATTATCATCATTTGACCAGATAGACCCAATGTCATCACCAGTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATTATCATCATTTGACCAGATAGACCCAATGTCATCACCAGTTGT  371

seq1  TGTGTTTGTAAGAGAGCAATGGTCAGAGAAGTCAGGGTGACAATGAGACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGTAAGAGAGCAATGGTCAGAGAAGTCAGGGTGACAATGAGACC  421

seq1  AGATGCCTGATATAGCAAAACAATCAGAGGTGTGCTGCTAGCTTCAATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCTGATATAGCAAAACAATCAGAGGTGTGCTGCTAGCTTCAATAC  471

seq1  AAGAGCATCAGTGGCCACAAACCAAATAAAGTAAGTTGGCTCTGTTAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATCAGTGGCCACAAACCAAATAAAGTAAGTTGGCTCTGTTAAAC  521

seq1  AAGGGAATGCTTTCTTCCTTAAGCACACAGAAGGACCAGTCCTCCACTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATGCTTTCTTCCTTAAGCACACAGAAGGACCAGTCCTCCACTGT  571

seq1  ACAGGACAAGATCTTGTACTGTACTGTTGTTCACAATCTAAATTAATTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACAAGATCTTGTACTGTACTGTTGTTCACAATCTAAATTAATTGT  621

seq1  ATGCCTTTTCTTGTATTTAGTGCAATAATTTCCAAATCTGCATAAGTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTTCTTGTATTTAGTGCAATAATTTCCAAATCTGCATAAGTTTT  671

seq1  GAAATAAAGATATTAAGTATTTTTGTATCACATGTCTATCTTTTAGAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGATATTAAGTATTTTTGTATCACATGTCTATCTTTTAGAGAA  721

seq1  CAGGCTTATTGTACTTACTTAGATATCTTATTCATTAATTCCTAATATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTATTGTACTTACTTAGATATCTTATTCATTAATTCCTAATATTT  771

seq1  ATTAAGTAACTATTATCATCACTGATTATTAGGTATTGTTTTTATTATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTAACTATTATCATCACTGATTATTAGGTATTGTTTTTATTATCT  821

seq1  TCAAAATATAGTGTGGAATATCAGAATATATGATTAAAATCTAAAGCTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATATAGTGTGGAATATCAGAATATATGATTAAAATCTAAAGCTAG  871

seq1  TATTAGATAGAAGAGAAAGACAGCAACACATTTCCCTTATCCAGTGTGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATAGAAGAGAAAGACAGCAACACATTTCCCTTATCCAGTGTGGT  921

seq1  ATTCTGGCATTTATTTAAAGAATATATTATGTTTAAGAAAAAGTCTTATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCATTTATTTAAAGAATATATTATGTTTAAGAAAAAGTCTTATG  971

seq1  AAAAATTCACAATTCTCTCTTGCAATATCTGGGTTTTCCTCTCTGTTAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCACAATTCTCTCTTGCAATATCTGGGTTTTCCTCTCTGTTAAT  1021

seq1  ATATATATTTTAATAAAAAATTGTTTATTTCAGATTAAGACAAAGTTTTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTTTAATAAAAAATTGTTTATTTCAGATTAAGACAAAGTTTTC  1071

seq1  AATTCTCTTCCAGGTACCATGCATTTAAATGTCCCATCTCTATTTTTGCA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTTCCAGGTACCATGCATTTAAATGTCCCATCTCTATTTTTGCA  1121

seq1  ATATAATTTTGAAAGAATTC  1169
      ||||||||||||||||||||
seq2  ATATAATTTTGAAAGAATTC  1141