BAC Information

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BAC

Clone NameB6Ng01-182P13
Chromosome1 (Build37)
Map Location 169,914,351 - 169,914,779
singlet/doubletsinglet
Overlap genenone
Upstream geneC030014K22Rik, Uck2, LOC100039844, Tmco1, Aldh9a1, Mgst3, Lrrc52, Rxrg, Lmx1a, LOC100039879
Downstream genePbx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182P13.b
ACCGA008720
length800
definitionB6Ng01-182P13.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagttttcattctgtatcatgagaaacagaactcatattacta
ttatactcatgctctttcactttttttattggatactttatgcacatttc
taatgttatcccctttcagtcctcccccccagaaaccccctatcctatcc
aaccaccccttgcttctatgagggtgctcacccatccacccacctagaat
tcccttacactggggcatcgagacttcacaggaccaagggcctctcctcc
cattgatgcccaacaaggacaccctctgctacatatgaggctggcactat
gggtccctccatgtataccctttggttggtggtttagtccctgggagctt
gggggggggggggaatagatgtgagggtgttgtggatggtgtaattcagc
caacctaaaatcagaccacttcctctagggaatgatactatatagaggct
ctgcctgagtctctactgttggcaggttgatcagtgctcaccagacttca
atggggaaagatcatgtttccatggttactttgtacctgggaccactgag
ccagcattgggatggttggttggcatcttcaaaatgcaacatctcatcca
ttcgttcatctgggggtctccctcaagcagaggatgtcctcaggttaggc
acttgaaatagattcttcatttctgtcttctcagagataaactcatttta
ctattttggcatcaattttgtgctatttccagttgtttgaattcattata
tattgggttctctaattaacttttatgaattctgaggctatgttaattca

quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_169914351_169914779
seq2: B6Ng01-182P13.b_405_841

seq1  AATAGATGTGAGGGTGTTGTGGATGGTGTAATTCAGCCAACCTAAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGTGAGGGTGTTGTGGATGGTGTAATTCAGCCAACCTAAAATCA  50

seq1  GACCACTTCCTCTAGGGAATGATACTATATAGAGGCTCTGCCTGAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTTCCTCTAGGGAATGATACTATATAGAGGCTCTGCCTGAGTCTC  100

seq1  TACTGTTGGCAGGTTGATCAGTGCTCACCAGACTTCAATGGGGAAAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTGGCAGGTTGATCAGTGCTCACCAGACTTCAATGGGGAAAGATC  150

seq1  ATGTTTCCATGGTTACTTTGTACCTGGGACCACTGAGCCAGCATTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCCATGGTTACTTTGTACCTGGGACCACTGAGCCAGCATTGGGAT  200

seq1  GGTTGGTTGGCATCTTCAAAATGCAACATCTCATCCATTCGTTCATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTGGCATCTTCAAAATGCAACATCTCATCCATTCGTTCATCTGG  250

seq1  GGGTCT-CCTCAAGCAGAGGATGTCCTCAGG-TAGGCACTTGAAATAGAT  298
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  GGGTCTCCCTCAAGCAGAGGATGTCCTCAGGTTAGGCACTTGAAATAGAT  300

seq1  TCTTCA-TTCTGTCTTCTCAGAGATAAACTCA-TTTACTA-TTTGGCATC  345
      |||||| ||||||||||||||||||||||||| ||||||| |||||||||
seq2  TCTTCATTTCTGTCTTCTCAGAGATAAACTCATTTTACTATTTTGGCATC  350

seq1  AATTTTGTGCTATTTCCAGTTGTTTGAATTCATTATATATT-GGTTCTCT  394
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATTTTGTGCTATTTCCAGTTGTTTGAATTCATTATATATTGGGTTCTCT  400

seq1  -ATTAACTTTTATG-ATTCTGAGGCTATGTTAGTTCA  429
       ||||||||||||| ||||||||||||||||| ||||
seq2  AATTAACTTTTATGAATTCTGAGGCTATGTTAATTCA  437