BAC Information

Click to search

BAC

Clone NameB6Ng01-183A14
Chromosome1 (Build37)
Map Location 145,927,247 - 145,927,896
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2
Downstream geneRgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21, Rgs18, LOC667877
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183A14.bB6Ng01-183A14.g
ACCGA008767GA008768
length1,208885
definitionB6Ng01-183A14.b B6Ng01-183A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcatagcgacacactattggcttattcaaacatcagcagcaaa
attacatgtaagtgcagggtgtcggaggtctgtagttgttgactcagttt
agatagccctgttaagtcttcacattcccctttattttatggtcaagatg
ttcccaggaatgttttaacaacagggcatacccaggtttgtttttctctt
ttctcagccccaggcagcctctaggttgacaaacaaccagcaatttctga
gtactttatatgacttactggtcttgaaatttcatctttctttcacatcc
actttccaattagggttatttatgcccagttcccaagatgaaactcatat
ctgtcaccattatcaggatcaaaggctagacagactagcctgtgagtatt
gttctgctaaattaacagtgttaagccaactgctaatgacttatcattat
tatacccataatgcatcccttaacccctgtcagataagcttttatttttc
agtagatggcattaacacagagatccataattagtgaaggtgcaggaaat
aaaaaaatgacgaatgttcagttctagagggacatctatatcatatatcc
ctcctacgactcagagattattgagaagaggggtaagaatgattgtaagg
gctataggtgacaaatgactacaataaagcagcattttctaactgtgcga
acagttgtatatttgaacttaaagtactgtgacaatgtgtgtaagacctg
tgcaagctcaagccagaggaaaatcccaggctggagaggggaggtgaaca
gctgggaagctgttgacaactaatagctactgggagagggagagtctatt
gttttaagtgtgtggccccagatgggtcctgcatgcttgaatggaagatc
actcatccaatagtacatggatgatacaaactttacttaactggttttta
aaaattgggacataagttgagtgtgtactgaaagggtggtagatctggga
agagattgggaaggaaagatgaatatgatcagagtacatggtatgaaata
ttcagagaactagtcactgcaaataaaaaataaaataaatttaaaataag
gacctgatcagggagtaagaagagaatagagacgcaaaatgggcagaaac
aaagtccagcaacaccctctgtatgaatgtggcttagaagagacacagag
ctattcga
gaattcccaacacccacatggcagttcacaattgtctgtgactccagatc
caggagatccaacaccaatatccacactaatgcacataaaataaaaaaaa
gaaatcattaaaagaaagaataattgggggttttgatgaaagtatatata
cacctataaaattacaaaagaaaaacataaattttaaaaataaaaattga
caatttctgggatactgagaaagcgttttaatgtatctgtaaatagaatt
ccagagtaagaaaggagtcagaagaaagatgttgaaagaaacaatggtcc
aggactctccaatttcatgcagaatagcaaattacagtttcaaaaactca
ctaaactgtaagaaggctaaatagtgaatattacttctagatatatcata
gtcaaaacgctcatagataaaacaagtatttgactactggaaaatgtggg
aggcagaaatggaaaacggatgacatgatagataaatggagacttttcac
tgtgaactgtagaactcggaagactttggaccatgatcacaaagtgctga
aggaaagtgaaaacaaccaccagacaagaatcagcaaagctcttctgcaa
agacaaaggtaaaatggaaaggactgcaaacaattgtaaattaagagggg
gcagggaggggaaagggggggacataatcaggcatggggggggcaggact
gaagccctgagggccagcagaatgtatggaaacaggcaatctcaggaggt
agggggacctttttttttttttttttttagttattagatagtttatttac
atttcaaatgttatcctctttcctggttttccctccaaaacctcctcccc
ccctatactccccctccccctgctcaccaacccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_145927247_145927896
seq2: B6Ng01-183A14.g_64_713

seq1  GAATTCCCAACACCCACATGGCAGTTCACAATTGTCTGTGACTCCAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACACCCACATGGCAGTTCACAATTGTCTGTGACTCCAGATC  50

seq1  CAGGAGATCCAACACCAATATCCACACTAATGCACATAAAATAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATCCAACACCAATATCCACACTAATGCACATAAAATAAAAAAAA  100

seq1  GAAATCATTAAAAGAAAGAATAATTGGGGGTTTTGATGAAAGTATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATTAAAAGAAAGAATAATTGGGGGTTTTGATGAAAGTATATATA  150

seq1  CACCTATAAAATTACAAAAGAAAAACATAAATTTTAAAAATAAAAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATAAAATTACAAAAGAAAAACATAAATTTTAAAAATAAAAATTGA  200

seq1  CAATTTCTGGGATACTGAGAAAGCGTTTTAATGTATCTGTAAATAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTGGGATACTGAGAAAGCGTTTTAATGTATCTGTAAATAGAATT  250

seq1  CCAGAGTAAGAAAGGAGTCAGAAGAAAGATGTTGAAAGAAACAATGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTAAGAAAGGAGTCAGAAGAAAGATGTTGAAAGAAACAATGGTCC  300

seq1  AGGACTCTCCAATTTCATGCAGAATAGCAAATTACAGTTTCAAAAACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTCCAATTTCATGCAGAATAGCAAATTACAGTTTCAAAAACTCA  350

seq1  CTAAACTGTAAGAAGGCTAAATAGTGAATATTACTTCTAGATATATCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTGTAAGAAGGCTAAATAGTGAATATTACTTCTAGATATATCATA  400

seq1  GTCAAAACGCTCATAGATAAAACAAGTATTTGACTACTGGAAAATGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAACGCTCATAGATAAAACAAGTATTTGACTACTGGAAAATGTGGG  450

seq1  AGGCAGAAATGGAAAACGGATGACATGATAGATAAATGGAGACTTTTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAATGGAAAACGGATGACATGATAGATAAATGGAGACTTTTCAC  500

seq1  TGTGAACTGTAGAACTCGGAAGACTTTGGACCATGATCACAAAGTGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTGTAGAACTCGGAAGACTTTGGACCATGATCACAAAGTGCTGA  550

seq1  AGGAAAGTGAAAACAACCACCAGACAAGAATCAGCAAAGCTCTTCTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTGAAAACAACCACCAGACAAGAATCAGCAAAGCTCTTCTGCAA  600

seq1  AGACAAAGGTAAAATGGAAAGGACTGCAAACAATTGTAAATTAAGAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGGTAAAATGGAAAGGACTGCAAACAATTGTAAATTAAGAGGGG  650