BAC Information

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BAC

Clone NameB6Ng01-183C14
Chromosome1 (Build37)
Map Location 52,389,222 - 52,390,212
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383504, Obfc2a, Myo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735
Downstream geneNab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik, Inpp1, Hibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183C14.bB6Ng01-183C14.g
ACCGA008862GA008863
length1,223988
definitionB6Ng01-183C14.b B6Ng01-183C14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctacagctgataaacaacttcatcaaagtggctagatataaaaa
ttaactcaaacaaaacaatagccttcctctactgaaaggataaacagact
gagaaagaaattagggtaatgacacccttcacaatagtcacaaataatat
aaaatatcttggtgtggctctaaccaagcaagtgaaaggtctgaatgaca
agaatttaaagtctctgaagaaagaaattgaagaagatctcagaagatga
aaagacctcccatgatcatggattggtaggattaatatagtaaaaatgtt
catcttgccaaaaacaatctacagattcgatgcaattcccattaaaattt
caactcaattcttcataggcttagaacaatttgcaaattcatttggaata
accaaaaacccaggaaagtgaaaactattctcaacaataaaagaacttct
gggggaaatcaccatgcctgacctcaagctgtattacagagcaattgtga
taaaaactgcatggtattggcattgagagaggcaagtagatcaatggaaa
agaattgaagatccataaatgaatccacacacctatggtcacttgatagt
tgacaaagctaaaaccatccagtggaaaaaagagggcattttcaacaaat
gatgctagtttaactggtggtcagcatgtagaggaatgcaaattgatcca
ttcttatctctttgtaaaaaactcatgtccaagcagataaaggacctcca
cataaaatcagatatactgaatcttatagaagagaaagtagggaagagcc
tagaacacatgagcacacgggaaaattttctgatcagaacaacaatggct
tatactttaagatcaacaatagataaatgggacctcataaaattgcaaag
cttctgaaaggcaaaggacactgtcaatagcacacaatggcagccaacag
attgggaaaagatctttaccaaccctacatccaatagagggatatattcc
aataatataaaaagaactcaagaagtcagactccagagaccaaataaccc
tatttaaaaatgagtacagagctaacaagatctcaactgagatctcgaat
gctgtgagcaccctaaagaatgttcagtggtcctagtcatcactaattgc
aattcagatgatcttgaaatcaaccttcaacacaggttcaggaatataag
ccttaagaagatctaacatagca
gaattcatatttacagagtggctctgtatcagaaaggatagaaagaagga
ccagtcctttcagtgtgtctcagaaaggttgtcaaaaaatggcccaggac
acactaagaagatgctcctgctgtgggaactagtgcactcacctggcctc
agctgctttactcaaagcctaatgtcagaaacgatattcccccacttatt
cccataatttttatcccatttccactcggctccctgttggcttaaaaagg
tccctttttcttttaaggcataagaatatggaggaaatgtcataatattg
tgtagtctccagaacctctcttgcctcttaaagaggctcagatattgcct
cttggtggggcggggcactgggaaatcagtgtcttctcccctgcccaaga
caggtactatacctgctcaccctcgtgccaaggctttgatacacacaggc
aactgtggggcttcattgagaagcatggaatctaaaaccgactggccaga
aaggaatgtaacctatctttcacgagcctttgttttatgagatgctaaga
cctagcacgaacgtgtatgaactacatatgcaaagaaaacatatcacatg
tgatacagccttctagactgtggcctttctagatatgtaactaaaaactg
gtctgaaatccagaaaacaaaaacaaaaacaaaaacactgaacattccct
ctcagtggcgtttcccagcttcagatcttcagatgtgaatgcatggcgtg
cagcgaccagagagaccagggaacttaaaacagcgaccattgaatctggt
gaggttacagaggggagtagcaggtgcggtgaaaggacaaatggaaaaaa
cgggcagggagagctaacgacaggaagagagggagaaagaagaggcaaat
aactctaagatgtgtgataaattctcacagaatcataccatatttaccta
agtgtgtgtgtgtgtgtgtgttgtgtggtgtggtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52389222_52390212
seq2: B6Ng01-183C14.g_64_1051

seq1  GAATTCATATTTACAGAGTGGCTCTGTATCAGAAAGGATAGAAAGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTACAGAGTGGCTCTGTATCAGAAAGGATAGAAAGAAGGA  50

seq1  CCAGTCCTTTCAGTGTGTCTCAGAAAGGTTGTCAAAAAATGGCCCAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTTTCAGTGTGTCTCAGAAAGGTTGTCAAAAAATGGCCCAGGAC  100

seq1  ACACTAAGAAGATGCTCCTGCTGTGGGAACTAGTGCACTCACCTGGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAGAAGATGCTCCTGCTGTGGGAACTAGTGCACTCACCTGGCCTC  150

seq1  AGCTGCTTTACTCAAAGCCTAATGTCAGAAACGATATTCCCCCACTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTTACTCAAAGCCTAATGTCAGAAACGATATTCCCCCACTTATT  200

seq1  CCCATAATTTTTATCCCATTTCCACTCGGCTCCCTGTTGGCTTAAAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAATTTTTATCCCATTTCCACTCGGCTCCCTGTTGGCTTAAAAAGG  250

seq1  TCCCTTTTTCTTTTAAGGCATAAGAATATGGAGGAAATGTCATAATATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTTCTTTTAAGGCATAAGAATATGGAGGAAATGTCATAATATTG  300

seq1  TGTAGTCTCCAGAACCTCTCTTGCCTCTTAAAGAGGCTCAGATATTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCTCCAGAACCTCTCTTGCCTCTTAAAGAGGCTCAGATATTGCCT  350

seq1  CTTGGTGGGGCGGGGCACTGGGAAATCAGTGTCTTCTCCCCTGCCCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGGGGCGGGGCACTGGGAAATCAGTGTCTTCTCCCCTGCCCAAGA  400

seq1  CAGGTACTATACCTGCTCACCCTCGTGCCAAGGCTTTGATACACACAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACTATACCTGCTCACCCTCGTGCCAAGGCTTTGATACACACAGGC  450

seq1  AACTGTGGGGCTTCATTGAGAAGCATGGAATCTAAAACCGACTGGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGGGCTTCATTGAGAAGCATGGAATCTAAAACCGACTGGCCAGA  500

seq1  AAGGAATGTAACCTATCTTTCACGAGCCTTTGTTTTATGAGATGCTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGTAACCTATCTTTCACGAGCCTTTGTTTTATGAGATGCTAAGA  550

seq1  CCTAGCACGAACGTGTATGAACTACATATGCAAAGAAAACATATCACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCACGAACGTGTATGAACTACATATGCAAAGAAAACATATCACATG  600

seq1  TGATACAGCCTTCTAGACTGTGGCCTTTCTAGATATGTAACTAAAAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGCCTTCTAGACTGTGGCCTTTCTAGATATGTAACTAAAAACTG  650

seq1  GTCTGAAATCCAGAAAACAAAAACAAAAACAAAAACACTGAACATTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAATCCAGAAAACAAAAACAAAAACAAAAACACTGAACATTCCCT  700

seq1  CTCAGTGGCGTTTCCCAGCTTCAGATCTTCAGATGTGAATGCATGGCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGCGTTTCCCAGCTTCAGATCTTCAGATGTGAATGCATGGCGTG  750

seq1  CAGCGACCAGAGAGACCAGGGAACTTAAAACAGCGACCATTGAATCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGACCAGAGAGACCAGGGAACTTAAAACAGCGACCATTGAATCTGGT  800

seq1  GAGGTTACAGAGGGGAGTAGCAGGTGCGGTG-AAGGACAAATGGAAAAAA  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGGTTACAGAGGGGAGTAGCAGGTGCGGTGAAAGGACAAATGGAAAAAA  850

seq1  CGGGCAGGGAGAGCTAACGACAGGAAGAGAGGGAGAAAGAAGAGGCAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAGGGAGAGCTAACGACAGGAAGAGAGGGAGAAAGAAGAGGCAAAT  900

seq1  AACTCTAAGGATGTGTGATAAATTCTCACAGAATCATACCATATTTACCT  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAA-GATGTGTGATAAATTCTCACAGAATCATACCATATTTACCT  949

seq1  AAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  991
      |||||||||||||||||||||| |||||| ||||| ||||||
seq2  AAGTGTGTGTGTGTGTGTGTGT-TGTGTG-GTGTG-GTGTGT  988