BAC Information

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BAC

Clone NameB6Ng01-184K16
Chromosome1 (Build37)
Map Location 147,758,561 - 147,759,714
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667877, LOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184K16.bB6Ng01-184K16.g
ACCGA009985GA009986
length1,2241,142
definitionB6Ng01-184K16.b B6Ng01-184K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggtttctccatctatggtaattgagagttttgctgggtatg
atagcctgggctggcatttgtgttctcttacagtttatataatatatgcc
caggatattctggctttcatagtctctgatgagaagtctggtataattct
aataagctggcctttatatgttagttgacctttttcccttactgctttta
atattctatctttatttagtgcatttgttgttctgattattatgtatcag
gaggaatttcttgtctggtccagtatatttggagttctgtaggctttttg
tatgttcaagggtatctctttctttaggttaggaagttttcttttataat
tttgttgaagatatttaatggcactttaagttgaaaatccccattctcat
ctatacctatgatccttaagtttggtcttctcattgtgttctggatttcc
tgaatgttttgagttaggatctttttttgcattttgcattttctttgatt
gttgtgtccatgtgctgcctctttaaggacttgtacctgtttagcagtgt
tatcctgtatttctttaagtgagttattaatgcccttcttaaaatcctct
accagcatcatgagatgtgattttaaatctgaatcttgcttttcaggtgt
gttggcgtatccaggactcactgtggtgagtgttctgggttctggtgatg
ctgaatggtcttggtttctgttagtaagattcgtacatttgcctttagcc
atcttttaatctctggtgttagatgttctagctgtccctggatggagctt
gttcttcctgtgattctgttagcctctgtcaccactcctgggagtccaac
tctctcctgagtcccagtgctcagagcactccctgcaaggcaagctctcc
tcttgcagggaaaagtgcacagaggtctgggagctgagatccacgttttg
gctgaagatgaagggcctcaaggcttcctgtccaataagctcttttactt
ctgaggcccacgagctcttatgtgttggactgtctctgcagacccaggga
tacaaggagggtgctgtcatctgagtctcaggttagagccctcctctggg
agctgactatcttagttttcctagatcctgggtgtatagagtgtctgcag
catggaaagtcctctggtactttggcacggtccttggatcatgaccaagg
tgcatgcccgtaactagtgtcgca

gaattccatattttgtaaattttttcaacgaaataataaactcaaattca
aatgttttaacttgaaacaaaagggagtgacaggaagcaacctctgtagc
atggcactttcccttttgaatcagcactgtctctcccatgagctaataca
taactaaaatacacccagaagattccatgtaaataaatatatgcaaggtc
atttattttgcttttattggagaaagccaccttaagacacatataaatta
tcacacaagattagccaaataaattttaactaatcattgaaatgttgtca
gccctataataaatagaccaatgtatgaacaaatatttgtgctttgaata
gtaaaaataaaataaaatgaggtctttaaatcaaagtatgaaacccattt
tggccaaatagatgatgtgatgtatctgaggacaattataaagacataat
tatgaagaaaccttagtgaataatacctcctgaactgcagaggtgtagca
gacctgtagtgtctgcattattgacttacattacttccaagccaatgtga
tgaacctctaattcaggcagagaatatatctccccagcttccagttccag
gtcgatggcacctgatcagaaaaatcaaaacacctggattgtatctttct
aatagctccccttcaacttcctccaggaaaaatagatctcatgcctttca
tgcatgataattgccatttatttttgtatcagccagttttgttagaagcc
atttcttctagggtaaatgcaattacaaaaatataatgacatgaagaaaa
taaattgattaattatgtgatatattgactaatcatcaatatcaaaaaat
ttgaaaacatcttcactagtaaaattttaatgttggaagaataaggaaaa
gagtacaaactaaataaattatcttaactagtttaaaacaattcatgtaa
tgtagataagatattaagccagagtcagggtttctattcctgcacaagca
tcatgactagaagcaagttgggggaggaaaaggtttattcagcttacact
caattgcctgttcatcacaacagaagtcagacaggattcacatagtgtag
aattgagcagagttaatgagaagccatgacgaatgctgcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147758561_147759714
seq2: B6Ng01-184K16.g_65_1206

seq1  GAATTCCATATTTTGTAAATTTTTTCAACGAAATAATAAACTCAAATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTTTGTAAATTTTTTCAACGAAATAATAAACTCAAATTCA  50

seq1  AATGTTTTAACTTGAAACAAAAGGGAGTGACAGGAAGCAACCTCTGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTAACTTGAAACAAAAGGGAGTGACAGGAAGCAACCTCTGTAGC  100

seq1  ATGGCACTTTCCCTTTTGAATCAGCACTGTCTCTCCCATGAGCTAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACTTTCCCTTTTGAATCAGCACTGTCTCTCCCATGAGCTAATACA  150

seq1  TAACTAAAATACACCCAGAAGATTCCATGTAAATAAATATATGCAAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAATACACCCAGAAGATTCCATGTAAATAAATATATGCAAGGTC  200

seq1  ATTTATTTTGCTTTTATTGGAGAAAGCCACCTTAAGACACATATAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTGCTTTTATTGGAGAAAGCCACCTTAAGACACATATAAATTA  250

seq1  TCACACAAGATTAGCCAAATAAATTTTAACTAATCATTGAAATGTTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAGATTAGCCAAATAAATTTTAACTAATCATTGAAATGTTGTCA  300

seq1  GCCCTATAATAAATAGACCAATGTATGAACAAATATTTGTGCTTTGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATAATAAATAGACCAATGTATGAACAAATATTTGTGCTTTGAATA  350

seq1  GTAAAAATAAAATAAAATGAGGTCTTTAAATCAAAGTATGAAACCCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATAAAATAAAATGAGGTCTTTAAATCAAAGTATGAAACCCATTT  400

seq1  TGGCCAAATAGATGATGTGATGTATCTGAGGACAATTATAAAGACATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAATAGATGATGTGATGTATCTGAGGACAATTATAAAGACATAAT  450

seq1  TATGAAGAAACCTTAGTGAATAATACCTCCTGAACTGCAGAGGTGTAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAAACCTTAGTGAATAATACCTCCTGAACTGCAGAGGTGTAGCA  500

seq1  GACCTGTAGTGTCTGCATTATTGACTTACATTACTTCCAAGCCAATGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTAGTGTCTGCATTATTGACTTACATTACTTCCAAGCCAATGTGA  550

seq1  TGAACCTCTAATTCAGGCAGAGAATATATCTCCCCAGCTTCCAGTTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCTAATTCAGGCAGAGAATATATCTCCCCAGCTTCCAGTTCCAG  600

seq1  GTCGATGGCACCTGATCAGAAAAATCAAAACACCTGGATTGTATCTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATGGCACCTGATCAGAAAAATCAAAACACCTGGATTGTATCTTTCT  650

seq1  AATAGCTCCCCTTCAACTTCCTCCAGGAAAAATAGATCTCATGCCTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCCCCTTCAACTTCCTCCAGGAAAAATAGATCTCATGCCTTTCA  700

seq1  TGCATGATAATTGCCATTTATTTTTGTATCAGCCAGTTTTGTTAGAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATAATTGCCATTTATTTTTGTATCAGCCAGTTTTGTTAGAAGCC  750

seq1  ATTTCTTCTAGGGTAAATGCAATTACAAAAATATAATGACATGAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTAGGGTAAATGCAATTACAAAAATATAATGACATGAAGAAAA  800

seq1  TAAATTGATTAATTATGTGATATATTGACTAATCATCAATATCAAAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGATTAATTATGTGATATATTGACTAATCATCAATATCAAAAAAT  850

seq1  TTGAAAACATCTTCACTAGTAAAATTTTAATGTTGGAAGAATAAGGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACATCTTCACTAGTAAAATTTTAATGTTGGAAGAATAAGGAAAA  900

seq1  GAGTACAAACTAAATAAATTATCTTAACTAGTTTAAAACAATTCATGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAAACTAAATAAATTATCTTAACTAGTTTAAAACAATTCATGTAA  950

seq1  TGTAGATAAGATA-TAAGCCAGAGTCAGGGTTTCTATTCCTGCACAAAGC  999
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  TGTAGATAAGATATTAAGCCAGAGTCAGGGTTTCTATTCCTGCAC-AAGC  999

seq1  ATCATGACTAAGAAGCAAGTT-GGGGAGGAAAGGGTTTATTCAGCTTACA  1048
      ||||||||| ||||||||||| |||||||||| |||||||||||||||||
seq2  ATCATGACT-AGAAGCAAGTTGGGGGAGGAAAAGGTTTATTCAGCTTACA  1048

seq1  CTTCCAAATTGCTGTTCATCACCAACAGAAGTCAGGACAGGAATTCACAT  1098
      ||  ||| |  |||||||||| |||||||||||| |||||| ||||||||
seq2  CT--CAATTGCCTGTTCATCA-CAACAGAAGTCA-GACAGG-ATTCACAT  1093

seq1  AGTGTAGGAATTTGGAGGCAGGAGTAAATGAAGAAGCCATGAAGGGATGC  1148
      |||||| |||||  || ||| |||| |||| |||||||||| | | ||||
seq2  AGTGTA-GAATT--GA-GCA-GAGTTAATG-AGAAGCCATG-ACGAATGC  1136

seq1  TGCTTC  1154
      ||||||
seq2  TGCTTC  1142


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