BAC Information

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BAC

Clone NameB6Ng01-185J05
Chromosome1 (Build37)
Map Location 118,802,963 - 118,803,953
singlet/doubletsinglet
Overlap genenone
Upstream geneCntnap5a
Downstream geneB020011L13Rik, LOC100041684, LOC636972
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185J05.bB6Ng01-185J05.g
ACCGA010649GA010650
length1,151999
definitionB6Ng01-185J05.b B6Ng01-185J05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatagggttatttgatt
ctttggattacacattcttgagttctttatatatattggatattagtccc
ctacctatttaggataggtaaagatcctttcccaaactgttggtggcctt
tttgtcttattgatggtgccatttgacttgcagaagctttgcaggtttat
gagatcccatttgttgattctagatcttacagctcaagccattgctattc
tattcaggaatttttcccctgtgcccatatcttcaaggtttttccccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ccacttagatttgaccttattaaatggagataaaaatggatcaattggct
ttcttctacatgataacctccagttgtgccagcaccatttgttgaaaata
ctgtcttttttccattggaaggttttagctcccttgtcaaagatcaagtg
accataggcgggtgggttcatttctgagtcttcagttctattcatttggt
ctatttgtctgtcgctatcccagtaccatgcagtttttaatcacagttgc
cctgtagtccagctttaggtcaggcatggtgattccaccagagcttcttt
tatcattgagaagagtttttgctatcctaggttttttattattctagatg
aatttgcaaattgccctttctaactctgtgaagaattgagttggaatttt
gatggggattccattgaatctgtagattgcttttggaaagatagccattt
ttactatattgattctgccaatccatgagcatgggagatctttccatctt
ctgagatctccttcaatttcttttcttcagagactttgaagtttttatca
tacagatatttcactttacttagagtcacacaaatgtattttatattatt
ttttgactattatgaaagggtgttgtttccctaatttcttcttcagccta
atttatccttggtgtagagaaaggccattgacctgtttgagttaatttaa
tattccagctacttcactgaagctgttatcaggttagaagttctctggtg
gattttttagtcacttaatattacctactcaaacatctgccaaaaaagtg
g

gaattcattcccaaagttctaatagttaacaactgtagcttcttgttatc
tgagctgcgaaaaaactgtttaaaatcgtgatctgtcttcatgtggatcc
agccctagtagtgtgatcatcaactgagaatatcttgggccccagactca
ctcccagaagggccacaatcagagtgggaattaggactagccaagagaaa
ctattaaatttgcccccagggatgagagaatcttcacatagacccaagtg
atgcaatgtgacattgtcctccaggttatccatgattggtgaagaaagat
gcagacaatctatagctgggaagaattgagataggacgggcttggggttc
ctgtgatcagggactgaggagaaccatgaggaaagggagaaggtagagag
taggttggattaggtgagtcataaaaatatggccatggtggtaggccaat
tgaaattaagagcaggccacacagagcatgaaaaattataatttgggcta
ttaatggggaaatagattctaaaagcttagtgtctagatatcaccctagc
tctagtgctgaccaaggcttattatcataataaaagttgtgtgtccttta
tctaaaaactaaaagatcaaggcagtgtaaaagcccccaatcgaaattaa
ataacttctacagtaattgctttctaagttgtggaaaatttatcttttta
aaatggtgatcacctttgtgggggactagctccagtggggtggtcatgaa
ctgtgaatgtgtggggacccagagtcccagtagggcccagccatgggaca
cacaggtaccctctctgcccttagcagagacttgtccaccatttttattt
tgtaaggtcctaaaaaatggagctttgctgggggttaagggacaaaggga
caaaaggaaagcacatgggattgagacccaccatgggcattttgatgagt
ttcctttatgaggaatttgatatattgctccatagttttcttaatctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_118802963_118803953
seq2: B6Ng01-185J05.g_65_1063 (reverse)

seq1  TCAGATT-AGAAAACTAT-GAGC--CATATCAAATTCCTCATAAAGG-AA  45
      ||||||| |||||||||| ||||   ||||||||||||||||||||| ||
seq2  TCAGATTAAGAAAACTATGGAGCAATATATCAAATTCCTCATAAAGGAAA  50

seq1  CTCATCAAAATG-CCAT-GTGGGTCTCAAT-CCATGTGCTTTCCTTTTGT  92
      |||||||||||| |||| |||||||||||| |||||||||||||||||||
seq2  CTCATCAAAATGCCCATGGTGGGTCTCAATCCCATGTGCTTTCCTTTTGT  100

seq1  CCCTTTGTCCCTTAACCCCCAGCAAAGCTCCATTTTTTAGGACCTTACAA  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTCCCTTAACCCCCAGCAAAGCTCCATTTTTTAGGACCTTACAA  150

seq1  AATAAAAATGGTGGACAAGTCTCTGCTAAGGGCAGAGAGGGTACCTGTGT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATGGTGGACAAGTCTCTGCTAAGGGCAGAGAGGGTACCTGTGT  200

seq1  GTCCCATGGCTGGGCCCTACTGGGACTCTGGGTCCCCACACATTCACAGT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATGGCTGGGCCCTACTGGGACTCTGGGTCCCCACACATTCACAGT  250

seq1  TCATGACCACCCCACTGGAGCTAGTCCCCCACAAAGGTGATCACCATTTT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACCACCCCACTGGAGCTAGTCCCCCACAAAGGTGATCACCATTTT  300

seq1  AAAAAGATAAATTTTCCACAACTTAGAAAGCAATTACTGTAGAAGTTATT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATAAATTTTCCACAACTTAGAAAGCAATTACTGTAGAAGTTATT  350

seq1  TAATTTCGATTGGGGGCTTTTACACTGCCTTGATCTTTTAGTTTTTAGAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCGATTGGGGGCTTTTACACTGCCTTGATCTTTTAGTTTTTAGAT  400

seq1  AAAGGACACACAACTTTTATTATGATAATAAGCCTTGGTCAGCACTAGAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACACACAACTTTTATTATGATAATAAGCCTTGGTCAGCACTAGAG  450

seq1  CTAGGGTGATATCTAGACACTAAGCTTTTAGAATCTATTTCCCCATTAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTGATATCTAGACACTAAGCTTTTAGAATCTATTTCCCCATTAAT  500

seq1  AGCCCAAATTATAATTTTTCATGCTCTGTGTGGCCTGCTCTTAATTTCAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAATTATAATTTTTCATGCTCTGTGTGGCCTGCTCTTAATTTCAA  550

seq1  TTGGCCTACCACCATGGCCATATTTTTATGACTCACCTAATCCAACCTAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTACCACCATGGCCATATTTTTATGACTCACCTAATCCAACCTAC  600

seq1  TCTCTACCTTCTCCCTTTCCTCATGGTTCTCCTCAGTCCCTGATCACAGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCTTCTCCCTTTCCTCATGGTTCTCCTCAGTCCCTGATCACAGG  650

seq1  AACCCCAAGCCCGTCCTATCTCAATTCTTCCCAGCTATAGATTGTCTGCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAAGCCCGTCCTATCTCAATTCTTCCCAGCTATAGATTGTCTGCA  700

seq1  TCTTTCTTCACCAATCATGGATAACCTGGAGGACAATGTCACATTGCATC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCACCAATCATGGATAACCTGGAGGACAATGTCACATTGCATC  750

seq1  ACTTGGGTCTATGTGAAGATTCTCTCATCCCTGGGGGCAAATTTAATAGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGTCTATGTGAAGATTCTCTCATCCCTGGGGGCAAATTTAATAGT  800

seq1  TTCTCTTGGCTAGTCCTAATTCCCACTCTGATTGTGGCCCTTCTGGGAGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGGCTAGTCCTAATTCCCACTCTGATTGTGGCCCTTCTGGGAGT  850

seq1  GAGTCTGGGGCCCAAGATATTCTCAGTTGATGATCACACTACTAGGGCTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGGGGCCCAAGATATTCTCAGTTGATGATCACACTACTAGGGCTG  900

seq1  GATCCACATGAAGACAGATCACGATTTTAAACAGTTTTTTCGCAGCTCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACATGAAGACAGATCACGATTTTAAACAGTTTTTTCGCAGCTCAG  950

seq1  ATAACAAGAAGCTACAGTTGTTAACTATTAGAACTTTGGGAATGAATTC  991
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAGAAGCTACAGTTGTTAACTATTAGAACTTTGGGAATGAATTC  999


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